Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O14
(1001 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0059 - 394001-394708 32 0.62
05_01_0564 - 4919294-4919391,4919491-4919620,4919700-4919789,491... 32 0.83
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.4
09_02_0543 + 10427321-10428315,10428440-10429154 30 2.5
06_01_0486 - 3455030-3455770 30 2.5
02_01_0302 - 2021221-2023305 30 3.3
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 30 3.3
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 29 4.4
03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,855... 29 4.4
03_06_0451 + 34025048-34027099,34028210-34028242 29 5.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.8
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 29 5.8
11_01_0066 - 536281-537196,537397-537452 29 7.7
09_02_0357 + 7788946-7789326,7789620-7789997 29 7.7
>08_01_0059 - 394001-394708
Length = 235
Score = 32.3 bits (70), Expect = 0.62
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXP---LSPSXPXGPXXTPXP 978
PP +P + PPPSH P +SP P P +P P
Sbjct: 36 PPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPPSPPP 73
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSP 984
PP P R PPP+ P P P P P P
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPP 38
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP SP PPP+ P PS P P P SP P
Sbjct: 26 PPPSPPIRPPPPPTPRPYAPPPPSHPLAP-PPPHISPPAP 64
>05_01_0564 -
4919294-4919391,4919491-4919620,4919700-4919789,
4919882-4919987,4920087-4920187,4920347-4920442,
4920549-4920648,4920761-4920897,4920980-4921111,
4921222-4921320,4921397-4921594,4921715-4921892,
4922020-4922075,4922168-4922320,4922422-4922514,
4922605-4922706,4922817-4922878,4922995-4923090,
4923354-4923453,4923546-4923617,4923728-4923775,
4923853-4923996
Length = 796
Score = 31.9 bits (69), Expect = 0.83
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 213 EQKAKETLKNANVTKVLLAALDEVQLQSLPLGAGILIYHLPTKIKPQTMSXLNXICQYIA 392
++ A+ L N VT L A + E + G L+Y + TK + + QYI
Sbjct: 26 QRTAENALANRKVTANLTAVIAEAGVSGCDKSVGNLLYTVATKYPANALVHRPVVIQYIV 85
Query: 393 SGK 401
S K
Sbjct: 86 SSK 88
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXP-LSPSXPXGPXXTPXPSPCXP 993
PP P PPP+ P LSPS P P P PS P
Sbjct: 1154 PPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPP 1194
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 877 PTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSP 984
P P +PPP SP+ P P TP P P
Sbjct: 35 PPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGP 70
>06_01_0486 - 3455030-3455770
Length = 246
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 868 IXPPTSPGRHXIPPPSHXTXXPL--SPSXPXGPXXTPXPSP 984
I PPT P +PPP+ + P P+ P P P PSP
Sbjct: 116 IPPPTPP---YVPPPTPPSPPPYVPPPTPPSPPPYVPPPSP 153
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 868 IXPPTSPG-RHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
I PPT P IPPP+ P P+ P P P P+P P
Sbjct: 104 IPPPTPPYVPPYIPPPTPPYVPP--PTPPSPPPYVPPPTPPSP 144
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Frame = +1
Query: 874 PPTS----PGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSP--CXPXS 999
PPT G PPSH P +P P GP P P+P C P S
Sbjct: 603 PPTQHVPGAGTPTTTPPSHS--HPSTPPSPSGPSFHPPPTPHNCSPPS 648
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 886 PGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPC 987
P R PPP H P P P P P P PC
Sbjct: 116 PPRPPPPPPPHPPEDP-PPHPPHPPDHPPPPPPC 148
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +1
Query: 877 PTSPG-RHXIPPPSHXTXXPLSPSXPXGPXXTPXPSP 984
PT P +H PPPSH P P+ P P P
Sbjct: 251 PTLPQPQHQAPPPSHPPALPALPAPNAPPPPAPQSQP 287
>03_02_0445 -
8551912-8552047,8552729-8552896,8553785-8554068,
8554143-8555386,8556901-8556967,8557059-8557150,
8557269-8557480,8558541-8558623,8559092-8559122,
8559770-8559951,8560557-8560616,8561092-8561289,
8561485-8561539,8562740-8562855,8563012-8563176,
8563310-8563483,8564134-8564333,8564778-8564882,
8565063-8565126,8566452-8566718
Length = 1300
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 389 CIRKXGFNVAEXTXPRTTFLAILMKLM*ILRNLK-KPVXLVXXSHPN 526
C R+ GFNV E P+T L + + L KP L SHP+
Sbjct: 458 CAREQGFNVIELNMPKTVVFPFLPHNKLLAQTLDLKPDKLHDSSHPS 504
>03_06_0451 + 34025048-34027099,34028210-34028242
Length = 694
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 327 GKSKCLHQVEATAIAPHLTPQAILW 253
G+S CL + EA ++ LTP ++W
Sbjct: 488 GRSGCLDEAEALILSMPLTPDGVIW 512
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSP 984
PP P + PPP P P P GP P P P
Sbjct: 336 PPPPPPKG--PPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSP 984
PP P + PPP P P P G P P P
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
>01_05_0687 +
24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSP 984
PP S R PPPSH P P P P P P
Sbjct: 10 PPES-ARMGSPPPSHSPSPPPLQGDPSLPTDAPPPEP 45
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +1
Query: 874 PPTSPGRHXI--PPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP SP I PPPS + P S + P P TP + P
Sbjct: 211 PPASPPPPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASP 252
>09_02_0357 + 7788946-7789326,7789620-7789997
Length = 252
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 877 PTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPS 981
PT P H PP S P + + P P P P+
Sbjct: 139 PTPPRAHTTPPCSRSVAAPRASTSPLRPSPVPPPA 173
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,369,759
Number of Sequences: 37544
Number of extensions: 311302
Number of successful extensions: 2547
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2407
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2940399740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -