Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O14
(1001 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 31 1.1
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 3.4
SB_56617| Best HMM Match : RVT_1 (HMM E-Value=0.04) 29 4.5
SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) 29 4.5
SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP SP PPP P P P P P P P P
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP P PPP P P P P P P P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPP 407
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP P PPP P P P P P P P P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPP 410
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP P PPP P P P P P P P P
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP+ P PPP P P P P P P P P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP P PPP P P P P P P P P
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP P PPP P P P P P P P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP 409
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP P PPP P P P P P P P P
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP P PPP P P P P P P P P
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXP--LSPSXPXGPXXTPXPSP 984
PP PG +PP P + P P GP P P P
Sbjct: 1253 PPPPPGMRPMPPQPPFMPPPPRMQPPGPPGPPGPPGPQP 1291
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 865 SIXPPTSP--GRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSP 984
S+ PP P G +PPP P P P G P P P
Sbjct: 918 SVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPP 959
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 877 PTSPGRHXIPPPSHXTXXPLSPSXPXGPXXT-PXPSPCXPXS 999
PTSP + PPP P P P P + P P P P S
Sbjct: 195 PTSPSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPS 236
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSPCXP 993
PP P R PPPS P P P P PSP P
Sbjct: 204 PPPPPPR---PPPSPPPPPPPPSPSPPRPPPPPPPSPPRP 240
>SB_56617| Best HMM Match : RVT_1 (HMM E-Value=0.04)
Length = 447
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 18 DFTHPPNFXKILGSXPMWFSEHMRYL 95
DF P K++ S P W ++H++YL
Sbjct: 6 DFIMPVMSKKLVSSEPAWINDHLKYL 31
>SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9)
Length = 233
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSP 984
PP PG PPP T P P+ P + P+P
Sbjct: 123 PPPPPGVFTPPPPYRTTAKPKGPTKKPPPMMSLTPTP 159
>SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPXGPXXTPXPSP 984
PP PG+ +P T SP+ P P P P P
Sbjct: 57 PPPGPGQPEMPGQPQVTPQTPSPASPGLPFMPPPPPP 93
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXPX-GPXXTPXPSPCXP 993
PP P + PPP T P P P GP P P+ P
Sbjct: 365 PPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 405
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +1
Query: 874 PPTSPGRHXIPPPSHXTXXPLSPSXP-XGPXXTPXPSPCXP 993
PP P + PPP T P P P GP P P+ P
Sbjct: 375 PPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 415
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,749,652
Number of Sequences: 59808
Number of extensions: 307896
Number of successful extensions: 1508
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2991217451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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