Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O11
         (1006 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544...    32   0.83 
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300...    30   2.5  
01_05_0647 + 23910318-23910694,23911732-23911867,23912067-239122...    29   7.7  

>04_04_0137 -
           23053148-23053798,23053911-23054146,23054268-23054458,
           23054587-23056010
          Length = 833

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = +1

Query: 724 PXPPXPXXPPPXXXXXXXXXXXGXAXXPPXGPAXXXPPP 840
           P PP P  PP            G A  PP  P    PPP
Sbjct: 369 PPPPPPPPPPAVTQQQDVKTSCGPAVPPPPPPTPPPPPP 407


>05_01_0384 +
           2997465-2999777,2999960-3000035,3003027-3003102,
           3003571-3004442,3004592-3004773,3005206-3005295,
           3005388-3005675,3005776-3005997,3006053-3006133,
           3006634-3006861
          Length = 1475

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/44 (34%), Positives = 16/44 (36%)
 Frame = +1

Query: 712 LSXXPXPPXPXXPPPXXXXXXXXXXXGXAXXPPXGPAXXXPPPS 843
           L+  P PP P  PPP             A     GPA   P PS
Sbjct: 576 LAQPPPPPPPPPPPPAAGNNNNNVANAGAAGNTAGPAAAAPAPS 619


>01_05_0647 +
           23910318-23910694,23911732-23911867,23912067-23912277,
           23912357-23912724,23913793-23914081,23914173-23914372,
           23914452-23914646
          Length = 591

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 13/40 (32%), Positives = 14/40 (35%)
 Frame = +1

Query: 724 PXPPXPXXPPPXXXXXXXXXXXGXAXXPPXGPAXXXPPPS 843
           P PP    PPP                PP  PA   PPP+
Sbjct: 49  PLPPSRHHPPPPEEPEPEPTPVNHHYPPPTTPAYSLPPPA 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,562,075
Number of Sequences: 37544
Number of extensions: 361128
Number of successful extensions: 1406
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2952114480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)