Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O11
(1006 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 32 0.74
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 31 0.98
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 30 3.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 9.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 9.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 9.1
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 31.9 bits (69), Expect = 0.74
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 40 DFDTLLCVAVRFASPPHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTK 219
DF+ LL V +F+ + + Y K V C++ + + D +F KDI+ K
Sbjct: 552 DFNKLLEVH-KFSKRFYEFTN-YFKNNKPKVFLECVSRLRKTAI--DGENFVKDIQKTYK 607
Query: 220 EFHKTLEQQFNSLTKSKDAQ 279
+ HKTLE + + K +D Q
Sbjct: 608 KSHKTLESDSSPVLKLEDPQ 627
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.98
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 217 KEFHKTLEQQFNSLTKSKDAQD-FSKAWKDGSESVLQ 324
+EFHKT E+ L K D + F AW DGS+ Q
Sbjct: 266 REFHKTAEEASKELRKHPDLWNRFQFAWLDGSDLASQ 302
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 160 GAMVRRDAPDFFKDIEHHTKEFH--KTLEQQFNSLTKSKDAQDFSKAWKDGSES 315
G +A ++F D++HHT F T + + +D D K W SE+
Sbjct: 519 GTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWIRRSEN 572
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 726 PPXXPXXXPPXXXPXXXXXSGGXRXXPXXGXGXXXPPPLHQPNXLXXXXRTHPPP 890
PP PP SGG P G PPP P PPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 726 PPXXPXXXPPXXXPXXXXXSGGXRXXPXXGXGXXXPPPLHQPNXLXXXXRTHPPP 890
PP PP SGG P G PPP P PPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 726 PPXXPXXXPPXXXPXXXXXSGGXRXXPXXGXGXXXPPPLHQPNXLXXXXRTHPPP 890
PP PP SGG P G PPP P PPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 724 PXPPXPXXPPPXXXXXXXXXXXGXAXXPPXGPAXXXPPP 840
P PP PPP G + PP + PPP
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 724 PXPPXPXXPPPXXXXXXXXXXXGXAXXPPXGPAXXXPPP 840
P PP PPP G + PP + PPP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 724 PXPPXPXXPPPXXXXXXXXXXXGXAXXPPXGPAXXXPPP 840
P PP PPP G + PP + PPP
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,417,646
Number of Sequences: 27780
Number of extensions: 247348
Number of successful extensions: 909
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2636483976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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