Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O09
         (954 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   5.9  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   7.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 546 NXNXPPXPPPPP 581
           N   PP PPPPP
Sbjct: 578 NAQPPPAPPPPP 589



 Score = 24.2 bits (50), Expect = 5.9
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +1

Query: 664 ATPPPXXXHPPXXXRPTPHPLXLGP 738
           A PPP    PP    P P PL  GP
Sbjct: 579 AQPPPAPPPPPPMG-PPPSPLAGGP 602


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -3

Query: 259 ANMALHLQPPLSRWWKFSHRLRQHHHP 179
           A+  LH QP  +      H    HHHP
Sbjct: 142 AHHPLHYQPAAAAAMHHHHHHPHHHHP 168


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 15/42 (35%), Positives = 15/42 (35%)
 Frame = -2

Query: 938 GGAGGGXXXXXXGERXVGXXRRGXGXXWXXRXGFGXEXGFGG 813
           GG GGG      G R     R G       R G     GFGG
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGG 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,659
Number of Sequences: 2352
Number of extensions: 12511
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)