Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O09
(954 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g00810.2 68417.m00112 60S acidic ribosomal protein P1 (RPP1B)... 79 4e-15
At4g00810.1 68417.m00111 60S acidic ribosomal protein P1 (RPP1B)... 79 4e-15
At1g01100.2 68414.m00013 60S acidic ribosomal protein P1 (RPP1A)... 78 8e-15
At1g01100.1 68414.m00012 60S acidic ribosomal protein P1 (RPP1A)... 78 8e-15
At5g47700.1 68418.m05889 60S acidic ribosomal protein P1 (RPP1C) 78 1e-14
At5g24510.1 68418.m02889 60s acidic ribosomal protein P1, putative 77 1e-14
At3g49460.1 68416.m05406 60S acidic ribosomal protein-related co... 37 0.023
At3g11402.1 68416.m01388 DC1 domain-containing protein contains ... 25 0.051
At1g67770.1 68414.m07733 RNA-binding protein, putative similar t... 25 0.11
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 33 0.28
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 33 0.37
At3g05470.1 68416.m00599 formin homology 2 domain-containing pro... 26 0.37
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 26 0.38
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 32 0.49
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 32 0.64
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 25 1.1
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 26 1.8
At1g61080.1 68414.m06877 proline-rich family protein 30 2.0
At1g68390.1 68414.m07813 expressed protein contains Pfam profile... 26 2.4
At2g28490.1 68415.m03462 cupin family protein similar to preproM... 30 2.6
At1g35830.1 68414.m04452 VQ motif-containing protein contains PF... 25 3.3
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 26 3.9
At5g25550.1 68418.m03040 leucine-rich repeat family protein / ex... 29 4.5
At4g23890.1 68417.m03436 expressed protein hypothetical protein,... 29 4.5
At5g21280.1 68418.m02555 hydroxyproline-rich glycoprotein family... 25 5.5
At5g13910.1 68418.m01627 AP2/EREBP-like transcription factor LEA... 29 6.0
At1g61750.1 68414.m06964 expressed protein contains Pfam profile... 29 6.0
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 24 7.0
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 24 7.4
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 28 7.9
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 28 7.9
At5g05340.1 68418.m00575 peroxidase, putative similar to peroxid... 28 7.9
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 7.9
At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family... 28 7.9
>At4g00810.2 68417.m00112 60S acidic ribosomal protein P1 (RPP1B)
similar to acidic ribosomal protein p1
Length = 113
Score = 79.0 bits (186), Expect = 4e-15
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +1
Query: 130 MVSKAELACVYSALILVDDDVAVIGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 309
M + ELAC Y+ +IL D+ +A+ +KI+T++KAA V++E YWP LFAK E NV DLI
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60
Query: 310 TNIGSGVG 333
N+G+G G
Sbjct: 61 MNVGAGGG 68
>At4g00810.1 68417.m00111 60S acidic ribosomal protein P1 (RPP1B)
similar to acidic ribosomal protein p1
Length = 113
Score = 79.0 bits (186), Expect = 4e-15
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +1
Query: 130 MVSKAELACVYSALILVDDDVAVIGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 309
M + ELAC Y+ +IL D+ +A+ +KI+T++KAA V++E YWP LFAK E NV DLI
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60
Query: 310 TNIGSGVG 333
N+G+G G
Sbjct: 61 MNVGAGGG 68
>At1g01100.2 68414.m00013 60S acidic ribosomal protein P1 (RPP1A)
similar to 60S ACIDIC RIBOSOMAL PROTEIN P1 GB:O23095
from [Arabidopsis thaliana]
Length = 112
Score = 78.2 bits (184), Expect = 8e-15
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +1
Query: 130 MVSKAELACVYSALILVDDDVAVIGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 309
M + ELAC Y+ +IL D+ +A+ +KI+T++KAA V +E YWP LFAK E NV DLI
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60
Query: 310 TNIGSGVG 333
N+G+G G
Sbjct: 61 MNVGAGGG 68
>At1g01100.1 68414.m00012 60S acidic ribosomal protein P1 (RPP1A)
similar to 60S ACIDIC RIBOSOMAL PROTEIN P1 GB:O23095
from [Arabidopsis thaliana]
Length = 112
Score = 78.2 bits (184), Expect = 8e-15
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +1
Query: 130 MVSKAELACVYSALILVDDDVAVIGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 309
M + ELAC Y+ +IL D+ +A+ +KI+T++KAA V +E YWP LFAK E NV DLI
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60
Query: 310 TNIGSGVG 333
N+G+G G
Sbjct: 61 MNVGAGGG 68
>At5g47700.1 68418.m05889 60S acidic ribosomal protein P1 (RPP1C)
Length = 113
Score = 77.8 bits (183), Expect = 1e-14
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +1
Query: 130 MVSKAELACVYSALILVDDDVAVIGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 309
M + ELAC Y+ +IL D+ +A+ +KI+T++KAA V +E YWP LFAK E NV DLI
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60
Query: 310 TNIGSGVG 333
N+G+G G
Sbjct: 61 MNVGAGGG 68
>At5g24510.1 68418.m02889 60s acidic ribosomal protein P1, putative
Length = 111
Score = 77.4 bits (182), Expect = 1e-14
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = +1
Query: 133 VSKAELACVYSALILVDDDVAVIGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 312
+S +ELAC Y+ALIL DD + + E IS ++K A V+VE YWP LFAK E N+ DLI
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 313 NIGSG 327
N+G+G
Sbjct: 61 NVGAG 65
>At3g49460.1 68416.m05406 60S acidic ribosomal protein-related
contains weak similarity to Swiss-Prot:52855 60S acidic
ribosomal protein P1 (L12) [Zea mays]
Length = 46
Score = 36.7 bits (81), Expect = 0.023
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 133 VSKAELACVYSALILVDDDVAVIGEKISTILKAAAVDVEPYWPGL 267
++ ELAC Y+AL+L D +ST++K A +++E YWP L
Sbjct: 1 MATGELACTYAALLLHDH------VTMSTLVKTANLNIESYWPSL 39
>At3g11402.1 68416.m01388 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 708
Score = 25.4 bits (53), Expect(3) = 0.051
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 558 PPXPPPPPXXP 590
PP PPPPP P
Sbjct: 34 PPPPPPPPVLP 44
Score = 25.0 bits (52), Expect(3) = 0.051
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 546 NXNXPPXPPPPP 581
N PP PPPPP
Sbjct: 28 NKEVPPPPPPPP 39
Score = 22.2 bits (45), Expect(3) = 0.051
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 711 HPPPPXPXPXXNP 749
+PPPP P P P
Sbjct: 65 YPPPPPPLPPPPP 77
>At1g67770.1 68414.m07733 RNA-binding protein, putative similar to
terminal ear1 gb|AAC39463.1
Length = 527
Score = 25.4 bits (53), Expect(3) = 0.11
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 534 TDFINXNXPPXPPPPP 581
T F + PP PPPPP
Sbjct: 37 TRFFLPHPPPPPPPPP 52
Score = 25.4 bits (53), Expect(3) = 0.11
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 558 PPXPPPPPXXP 590
PP PPPPP P
Sbjct: 44 PPPPPPPPPPP 54
Score = 24.2 bits (50), Expect(2) = 6.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 540 FINXNXPPXPPPPP 581
F+ PP PPPPP
Sbjct: 40 FLPHPPPPPPPPPP 53
Score = 22.6 bits (46), Expect(2) = 6.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 561 PXPPPPPXXP 590
P PPPPP P
Sbjct: 63 PPPPPPPHLP 72
Score = 20.6 bits (41), Expect(3) = 0.11
Identities = 11/36 (30%), Positives = 12/36 (33%)
Frame = +3
Query: 669 PPXXXTXPSXXXSXHPPPPXPXPXXNPVXXXXXSRA 776
PP P S PP P P P +RA
Sbjct: 46 PPPPPPPPPLYFSYFSLPPPPPPPHLPPTSVTPTRA 81
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = +3
Query: 558 PPXPPPPPXXPXXXXXXXXXXXXXXXXXXXXEGLXXDPPXXXTXPSXXXSXHPPPPXPXP 737
PP PPPPP P PP P PPP P P
Sbjct: 468 PPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSP 527
Query: 738 XXNPV 752
PV
Sbjct: 528 APTPV 532
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 558 PPXPPPPPXXPXXXXXXXXXXXXXXXXXXXXEGLXXDPPXXXTXPSXXXSXHPPPPXPXP 737
PP PPPPP P PP P PPPP P P
Sbjct: 451 PPPPPPPPPPPPVYSPPPPPPPPPPPPPVY------SPPPPSPPPPPPPVYSPPPPPPPP 504
Query: 738 XXNPV 752
PV
Sbjct: 505 PPPPV 509
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/67 (26%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Frame = +3
Query: 558 PPXPPPP--PXXPXXXXXXXXXXXXXXXXXXXXEGLXXDPPXXXTXPSXXXSXHPPPPXP 731
PP PPPP P + PP P PPPP P
Sbjct: 428 PPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSP 487
Query: 732 XPXXNPV 752
P PV
Sbjct: 488 PPPPPPV 494
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +1
Query: 835 PNPXLXXHXXPXPRRXXPTXLSPXXXXXXPPPAPPHNP 948
P+P + P P P SP PPP P ++P
Sbjct: 429 PSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSP 466
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/65 (32%), Positives = 22/65 (33%)
Frame = +3
Query: 543 INXNXPPXPPPPPXXPXXXXXXXXXXXXXXXXXXXXEGLXXDPPXXXTXPSXXXSXHPPP 722
IN PP PPPPP P PP + PS S PPP
Sbjct: 568 INKTPPPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPP----PPPSSRSIPSP--SAPPPP 621
Query: 723 PXPXP 737
P P P
Sbjct: 622 PPPPP 626
>At3g05470.1 68416.m00599 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 884
Score = 25.8 bits (54), Expect(2) = 0.37
Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = +3
Query: 534 TDF-INXNXPPXPPPPP 581
+DF I+ + PP PPPPP
Sbjct: 359 SDFGISVSAPPPPPPPP 375
Score = 25.4 bits (53), Expect(2) = 0.37
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 558 PPXPPPPPXXP 590
PP PPPPP P
Sbjct: 369 PPPPPPPPPLP 379
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 25.8 bits (54), Expect(2) = 0.38
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +1
Query: 841 PXLXXHXXPXPRRXXPTXL-SPXXXXXXPPPAPP-HNP 948
P H P P P + SP PPP PP H+P
Sbjct: 588 PPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPPVHSP 625
Score = 25.4 bits (53), Expect(2) = 0.38
Identities = 16/60 (26%), Positives = 18/60 (30%)
Frame = +1
Query: 559 PPXHHPPXXXPPXXXXXXXXXXXXXXXXXXXRX*XATPPPXXXHPPXXXRPTPHPLXLGP 738
PP H PP PP + PPP PP P P P+ P
Sbjct: 540 PPVHSPP---PPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPVHSPP 596
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/75 (28%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Frame = +3
Query: 510 CKAFML*ETDFINXNX-PPXPPPPPXXPXXXXXXXXXXXXXXXXXXXXEGLXXDPPXXXT 686
CK+F D + PP PPPPP P + PP
Sbjct: 359 CKSFSSYPIDCASFGCSPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPP--PP 416
Query: 687 XPSXXXSXHPPPPXP 731
PS +PPPP P
Sbjct: 417 PPSPPPYVYPPPPPP 431
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +3
Query: 558 PPXPPPPPXXPXXXXXXXXXXXXXXXXXXXXEGLXXDPPXXXTXPSXXXSXHPPPPXPXP 737
PP PPPPP P P PS PPPP P P
Sbjct: 394 PPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSPPYVYPPPPPSPQP 453
Query: 738 XXNP 749
P
Sbjct: 454 YMYP 457
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 31.9 bits (69), Expect = 0.64
Identities = 21/86 (24%), Positives = 28/86 (32%)
Frame = +3
Query: 492 IFHFVYCKAFML*ETDFINXNXPPXPPPPPXXPXXXXXXXXXXXXXXXXXXXXEGLXXDP 671
+F ++C + + + PP PPPPP P G+ P
Sbjct: 20 LFFTIHCFLLVQSQDPPLFPQSPPPPPPPP-PPPPPPPPPPPPPPPAVNMSVETGIPPPP 78
Query: 672 PXXXTXPSXXXSXHPPPPXPXPXXNP 749
P S PPPP P P P
Sbjct: 79 PPVTDMIKPLSS--PPPPQPPPRSQP 102
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 558 PPXPPPPPXXP 590
PP PPPPP P
Sbjct: 62 PPPPPPPPCPP 72
Score = 24.2 bits (50), Expect(2) = 1.1
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +3
Query: 669 PPXXXTXPSXXXSXHPPPPXPXPXXNP 749
PP P PPPP P P P
Sbjct: 65 PPPPPCPPPPSPPPCPPPPSPPPSPPP 91
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 25.8 bits (54), Expect(2) = 1.8
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +1
Query: 835 PNPXLXXHXXPXPRRXXPTXLSPXXXXXXPPPAPPHNP 948
P P + P P P PPPAP H+P
Sbjct: 568 PPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAPVHSP 605
Score = 23.0 bits (47), Expect(2) = 1.8
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +1
Query: 670 PPPXXXHPPXXXRPTPHPLXLGP 738
PPP PP P P P+ P
Sbjct: 537 PPPVHSPPPPVHSPPPPPVYSPP 559
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +3
Query: 543 INXNXPPXPPPPPXXPXXXXXXXXXXXXXXXXXXXXEGLXXDPPXXXTXPS--XXXSXHP 716
I + PP PPPPP P L P T P+ P
Sbjct: 449 IAISMPPPPPPPPPPPAVMPLKHFAPPPPPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAP 508
Query: 717 PPPXPXP 737
PPP P P
Sbjct: 509 PPPPPPP 515
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/68 (26%), Positives = 19/68 (27%), Gaps = 5/68 (7%)
Frame = +3
Query: 558 PPXPPPPPXX-----PXXXXXXXXXXXXXXXXXXXXEGLXXDPPXXXTXPSXXXSXHPPP 722
PP PPPPP P G PP P + PPP
Sbjct: 549 PPPPPPPPGTQAAPPPPPPPPMQNRAPSPPPMPMGNSGSGGPPPPPPPMPLANGATPPPP 608
Query: 723 PXPXPXXN 746
P P N
Sbjct: 609 PPPMAMAN 616
Score = 27.5 bits (58), Expect(2) = 3.0
Identities = 16/62 (25%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +3
Query: 567 PPPPPXXPXXXXXXXXXXXXXXXXXXXX-EGLXXDPPXXXTXPSXXXSXHPPPPXPXPXX 743
PPPPP P +G PP P+ + PPPP P
Sbjct: 475 PPPPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAV 534
Query: 744 NP 749
P
Sbjct: 535 AP 536
Score = 20.6 bits (41), Expect(2) = 3.0
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 540 FINXNXPPXPPPPPXXP 590
FI P P PPP P
Sbjct: 429 FIKTASLPLPSPPPTPP 445
>At1g68390.1 68414.m07813 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function,
DUF266; expression supported by MPSS
Length = 408
Score = 25.8 bits (54), Expect(2) = 2.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 540 FINXNXPPXPPPPP 581
FI + PP PPPPP
Sbjct: 73 FIVSSLPPSPPPPP 86
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 561 PXPPPPPXXP 590
P PPPPP P
Sbjct: 82 PPPPPPPSPP 91
>At2g28490.1 68415.m03462 cupin family protein similar to
preproMP27-MP32 [Cucurbita cv. Kurokawa Amakuri]
GI:691752, allergen Gly m Bd 28K [Glycine max]
GI:12697782, vicilin [Matteuccia struthiopteris]
GI:1019792; contains Pfam profile PF00190: Cupin
Length = 511
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 941 WGGAGGGXXXXXXGERXVGXXRRGXGXXWXXRXGFGXEXGFGG 813
WGGAGGG G G G G W G E G GG
Sbjct: 34 WGGAGGGEWGGAEGGGAWGGG-GGGGGAWGGEGEGGGEWGGGG 75
>At1g35830.1 68414.m04452 VQ motif-containing protein contains
PF05678: VQ motif
Length = 302
Score = 25.4 bits (53), Expect(2) = 3.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 522 ML*ETDFINXNXPPXPPPPP 581
+L +T + PP PPPPP
Sbjct: 73 ILNQTHLLPPQPPPPPPPPP 92
Score = 22.6 bits (46), Expect(2) = 3.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 561 PXPPPPPXXP 590
P PPPPP P
Sbjct: 84 PPPPPPPPPP 93
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 26.2 bits (55), Expect(2) = 3.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 537 DFINXNXPPXPPPPPXXP 590
+F+ + P PPPPP P
Sbjct: 235 EFVKPDPTPPPPPPPPIP 252
Score = 21.4 bits (43), Expect(2) = 3.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +3
Query: 669 PPXXXTXPSXXXSXHPPPPXP 731
PP P + PPPP P
Sbjct: 245 PPPPPPIPVKQSATPPPPPPP 265
>At5g25550.1 68418.m03040 leucine-rich repeat family protein /
extensin family protein similar to leucine-rich
repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana];
contains Pfam PF00560: Leucine Rich Repeat domains
Length = 433
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 664 ATPPPXXXHPPXXXRPTPHPLXLGP 738
+TPPP PP P P PL L P
Sbjct: 406 STPPPARPCPPVYSPPPPPPLSLAP 430
>At4g23890.1 68417.m03436 expressed protein hypothetical protein,
Synechocystis sp., PIR:S76577
Length = 250
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 540 FINXNXPPXPPPPP 581
FI N PP PPPPP
Sbjct: 132 FIEKNPPPPPPPPP 145
>At5g21280.1 68418.m02555 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 302
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 543 INXNXPPXPPPPP 581
+N PP PPPPP
Sbjct: 109 LNLFSPPPPPPPP 121
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 561 PXPPPPPXXP 590
P PPPPP P
Sbjct: 114 PPPPPPPPDP 123
>At5g13910.1 68418.m01627 AP2/EREBP-like transcription factor LEAFY
PETIOLE, putative nearly identical to AP2/EREBP-like
transcription factor LEAFY PETIOLE [Arabidopsis
thaliana] GI:6942018
Length = 211
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 534 TDFINXNXPPXPPPPPXXP 590
T ++ + PP PPPPP P
Sbjct: 87 TSIVSPDDPPPPPPPPAPP 105
>At1g61750.1 68414.m06964 expressed protein contains Pfam profile:
PF01657 domain of unknown function
Length = 352
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 489 KIFHFVYCKAFML*-ETDFINXNXPPXPPPPPXXP 590
K F VY ML + F+ PP PPPPP P
Sbjct: 226 KRFALVYSSNCMLTYKATFLAPPPPPPPPPPPPPP 260
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 24.2 bits (50), Expect(2) = 7.0
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +3
Query: 669 PPXXXTXPSXXXSXHPPPPXPXP 737
PP HPPPP P P
Sbjct: 120 PPSTAVEYQPHHRHHPPPPPPPP 142
Score = 22.6 bits (46), Expect(2) = 7.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 714 PPPPXPXPXXNP 749
PPPP P P +P
Sbjct: 136 PPPPPPPPPRSP 147
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 24.2 bits (50), Expect(2) = 7.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 670 PPPXXXHPPXXXRPTPHP 723
PPP PP P+P+P
Sbjct: 44 PPPPHFSPPHQPPPSPYP 61
Score = 22.6 bits (46), Expect(2) = 7.4
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = +1
Query: 835 PNPXLXXHXXPXPRRXXPTXLSPXXXXXXPPPAPP 939
P P H P P P P PP PP
Sbjct: 55 PPPSPYPHPHPPPPSPYPHPHQPPPPPHVLPPPPP 89
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 534 TDFINXNXPPXPPPPPXXP 590
T ++ + PP PPPPP P
Sbjct: 719 TPIVHTSSPPPPPPPPPPP 737
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +3
Query: 558 PPXPPPPPXXPXXXXXXXXXXXXXXXXXXXXEGLXXDPPXXXTXPSXXXSXHPPPPXPXP 737
PP PP PP P L PP P PPPP P P
Sbjct: 1070 PPLPPLPPSPPPPSPPLPPSSLPPPPPAALFPPLPP-PPSQPPPPPLSPPPSPPPPPPPP 1128
>At5g05340.1 68418.m00575 peroxidase, putative similar to peroxidase
[Nicotiana tabacum] gi|5381253|dbj|BAA82306; similar to
Peroxidase P7 [Brassica rapa (Turnip)] SWISS-PROT:P00434
Length = 324
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 281 KALANRPGQYGSTSTAAAFKMVEIFSPITATSSSTR 174
+ +N P + S TAA KM +I SP+T +S R
Sbjct: 283 RGYSNNPSSFNSDFTAAMIKMGDI-SPLTGSSGEIR 317
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.3 bits (60), Expect = 7.9
Identities = 27/130 (20%), Positives = 31/130 (23%)
Frame = +1
Query: 559 PPXHHPPXXXPPXXXXXXXXXXXXXXXXXXXRX*XATPPPXXXHPPXXXRPTPHPLXLGP 738
PP H PP PP +PPP PP P P+ P
Sbjct: 679 PPVHSPP---PPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPP 735
Query: 739 XXTXFXXXXXRXQXXXXXXXXXXXXXXXXXXXPNPXLXXHXXPXPRRXXPTXLSPXXXXX 918
F P P H P P P +
Sbjct: 736 PPPVFSPPPPAPIYSPPPPPVHSPPPPVHSPPPPPV---HSPPPPVHSPPPPVHSPPPPV 792
Query: 919 XPPPAPPHNP 948
PP P H+P
Sbjct: 793 HSPPPPVHSP 802
>At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 561
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +3
Query: 546 NXNXPPXPPPPPXXPXXXXXXXXXXXXXXXXXXXXEGLXXDPPXXXTXPSXXXSXHPPPP 725
N N PP PPPPP P +PP T S P P
Sbjct: 391 NSNPPPPPPPPP--PERRYESRASTSKLRKAPVESRTSKPNPPAKVTQYVGTGSESPLMP 448
Query: 726 XPXPXXNP 749
P P P
Sbjct: 449 IPPPPPPP 456
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,593,495
Number of Sequences: 28952
Number of extensions: 307795
Number of successful extensions: 2816
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2136
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2295205728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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