Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O08
         (955 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical pr...    48   1e-05
AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical...    44   2e-04
Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical pr...    42   9e-04
AL110500-18|CAB54478.1|  118|Caenorhabditis elegans Hypothetical...    36   0.032
Z81529-2|CAB04298.2|  133|Caenorhabditis elegans Hypothetical pr...    30   2.8  
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    30   2.8  
AL032627-14|CAA21549.1|  386|Caenorhabditis elegans Hypothetical...    30   2.8  
AL032626-23|CAE17974.1|   88|Caenorhabditis elegans Hypothetical...    29   3.7  
AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical ...    29   3.7  
AF068714-8|AAC17809.2|   86|Caenorhabditis elegans Hypothetical ...    29   3.7  
AF068714-9|AAC17810.1|   87|Caenorhabditis elegans Hypothetical ...    29   6.5  
Z83319-5|CAB05907.2|  446|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z82085-2|CAB04982.1|  247|Caenorhabditis elegans Hypothetical pr...    28   8.6  
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as...    28   8.6  

>U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical
           protein F16F9.1 protein.
          Length = 157

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 306 VFVHVLPCVCLPYCMDSCMNSDHYCPNCNAYIGTYTR*F 422
           V +   P   +P+C+DSC ++ HYCP CNA +G   R F
Sbjct: 119 VLICFFPLAFVPFCLDSCKDAHHYCPRCNALLGIKKRIF 157


>AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical
           protein Y87G2A.19 protein.
          Length = 110

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 13/27 (48%), Positives = 23/27 (85%)
 Frame = +3

Query: 336 LPYCMDSCMNSDHYCPNCNAYIGTYTR 416
           +P+C+++  +++HYCP+C A+IGTY R
Sbjct: 79  VPFCVETFKDAEHYCPSCRAWIGTYRR 105


>Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical
           protein F36G3.3 protein.
          Length = 141

 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +3

Query: 327 CVCLPYCMDSCMNSDHYCPNCNAYIGTYTR 416
           C  LP+C+ SC +  H CPNC A IG + R
Sbjct: 111 CCFLPFCLRSCKDIIHTCPNCRAMIGVHRR 140


>AL110500-18|CAB54478.1|  118|Caenorhabditis elegans Hypothetical
           protein Y87G2A.18 protein.
          Length = 118

 Score = 36.3 bits (80), Expect = 0.032
 Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +3

Query: 306 VFVHVLP-CVC-LPYCMDSCMNSDHYCPNCNAYIGTYTR 416
           +F+ ++P C C +P+ +D  ++ +H CP C  ++G + R
Sbjct: 79  IFLFIIPWCFCCVPFFLDQLLDVNHSCPACKKFLGRFNR 117


>Z81529-2|CAB04298.2|  133|Caenorhabditis elegans Hypothetical
           protein F35E8.2 protein.
          Length = 133

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 473 VQIIEWHTGIRNTFTIMKLSCIGSNVGVAVWT 378
           VQ++ W + +R    ++ LSC   N    +WT
Sbjct: 3   VQVVSWFSWLREPIQLLDLSCTSFNGTAFIWT 34


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
            F55H12.3 protein.
          Length = 2972

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +3

Query: 327  CVCLP-YCMDSCMNSDHYCPNCNAYIG 404
            CVCLP Y  D C N  H C + N + G
Sbjct: 1947 CVCLPDYTGDYCDNQIHSCSDINCFNG 1973


>AL032627-14|CAA21549.1|  386|Caenorhabditis elegans Hypothetical
           protein Y41C4A.11 protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 330 VCLPYCMDSCMNSDHYCPNCNAYIGTYTR 416
           +CL  C D   + DH CPNC   + T  R
Sbjct: 72  ICL--CFDVSKDVDHNCPNCGLLLATSNR 98


>AL032626-23|CAE17974.1|   88|Caenorhabditis elegans Hypothetical
           protein Y37D8A.26 protein.
          Length = 88

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 321 LPCVCLPYCMDSCMNSDHYCPNCNAYIGTYTR 416
           LPC  + +     M+  H CPNCN  +G   R
Sbjct: 56  LPCFIVCFWCRCFMDVHHRCPNCNKSLGKRDR 87


>AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical
           protein Y37D8A.6 protein.
          Length = 132

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 324 PCVCLPYCMDSCMNSDHYCPNCNAYIGTYTR 416
           P +C  +C+D   +S H CPNC   + +Y R
Sbjct: 103 PLLCC-FCLDGFKDSRHSCPNCGTIL-SYKR 131


>AF068714-8|AAC17809.2|   86|Caenorhabditis elegans Hypothetical
           protein B0348.2 protein.
          Length = 86

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 330 VCLPYCMDSCMNSDHYCPNCNAYI 401
           +C   C DS  ++ HYCP+C   +
Sbjct: 56  ICYWLCCDSSKDTMHYCPSCGTLL 79


>AF068714-9|AAC17810.1|   87|Caenorhabditis elegans Hypothetical
           protein B0348.1 protein.
          Length = 87

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 330 VCLPYCMDSCMNSDHYCPNCNAYIGT 407
           +C   C  S  ++ HYCP+C   + T
Sbjct: 56  ICYWLCCQSSKDTLHYCPSCGTLLAT 81


>Z83319-5|CAB05907.2|  446|Caenorhabditis elegans Hypothetical
           protein T02D1.4 protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
 Frame = +3

Query: 429 CERIAYSC---MPFDDLHLYSFVFIFHIHMINLKFGLMLYSS--VEYILQLXLXXXXAVV 593
           C+RIA  C     +  L  Y F+F+F + +      L++Y+S  ++Y + + +     ++
Sbjct: 73  CDRIANLCENRQLYTWLVGYGFIFVFLLALFGNVVNLLIYNSDHIKYYIAIRMLCTRLLM 132

Query: 594 NVLYLL 611
           N L L+
Sbjct: 133 NSLTLI 138


>Z82085-2|CAB04982.1|  247|Caenorhabditis elegans Hypothetical
           protein ZK218.3 protein.
          Length = 247

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 279 EDSHHRTDPVFVHVLPCVCLPYCMDSCMNSDHYCPN 386
           ED+    DP  V      C   C   C ++D+ CPN
Sbjct: 88  EDAIGAVDPDLVRAAVSTCPKTCGFCCQSADYNCPN 123


>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 77 protein.
          Length = 1004

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = +3

Query: 240 RVGHDQNHDQSQHEDSHHRTDPVFVHVLPC--VCLPYCMDSCMNSDHYCPNCNAYIGTYT 413
           RVG D     + HE+   +   + V +LP   + L      C N D   PN +  IGT+ 
Sbjct: 388 RVGRDLLASHNGHENVVLQIKKIMVQILPIHEMLLKEIDKVCSNWDSRYPNMSKTIGTFA 447

Query: 414 R*FHNCERIAYSCMPFDD 467
             F  C      C PF D
Sbjct: 448 D-FLKC------CQPFLD 458


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,547,574
Number of Sequences: 27780
Number of extensions: 337340
Number of successful extensions: 919
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)