Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O06
         (1028 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   5.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   6.7  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 553 PLXSQPLPGRWVP 591
           P+ + P PG+WVP
Sbjct: 426 PVQTTPKPGQWVP 438


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
            protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 972  PPXPPXXTTPXXPXFPP 1022
            PP P     P  P FPP
Sbjct: 175  PPLPQVPPLPLPPIFPP 191


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 337 IGLDRYYHHLRPLHHGYV 284
           I  +RYY   +PL  GY+
Sbjct: 164 ISFERYYAICKPLKAGYI 181


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 337 IGLDRYYHHLRPLHHGYV 284
           I  +RYY   +PL  GY+
Sbjct: 164 ISFERYYAICKPLKAGYI 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,400
Number of Sequences: 336
Number of extensions: 3856
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 29279548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)