Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O06
(1028 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5443| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_7904| Best HMM Match : F420_oxidored (HMM E-Value=9.94922e-44) 42 6e-04
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.023
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.053
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 36 0.070
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 34 0.16
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 34 0.16
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 34 0.16
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 34 0.21
SB_44923| Best HMM Match : Fibrillarin (HMM E-Value=0) 33 0.28
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 33 0.28
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 33 0.37
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 33 0.49
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 31 1.5
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 2.0
SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6) 30 2.6
SB_56663| Best HMM Match : F420_oxidored (HMM E-Value=0) 30 2.6
SB_15225| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 30 2.6
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.5
SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) 30 3.5
SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05) 30 3.5
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 29 4.6
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 29 4.6
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 6.1
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 29 8.0
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 24 8.6
>SB_5443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 46.4 bits (105), Expect = 4e-05
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +2
Query: 101 LPLIEAMKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPSDVASAKAFQGLGATALF 280
+ LI +M GFIG G+ A A+A GF+SAG+ K +I AS P D + + F+ LG T
Sbjct: 1 MSLISSM--GFIGAGKAATAMAKGFLSAGVIKASDIIASA-PRD-SDLRNFRALGCTVTS 56
Query: 281 EN 286
+N
Sbjct: 57 DN 58
>SB_7904| Best HMM Match : F420_oxidored (HMM E-Value=9.94922e-44)
Length = 851
Score = 42.3 bits (95), Expect = 6e-04
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 116 AMKIGFIGGGRLAFALANGFISAGLAKPDEITAS 217
++ +GFIGGG +A ALA GFIS+ + K + I AS
Sbjct: 356 SLHVGFIGGGNMAIALAKGFISSKMVKSENIIAS 389
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1
Query: 460 RVIRVMPNTPALVKEGXXXXXXXXXXXXXDAPLXSQ 567
RVIR+MPN P VK+G DA L Q
Sbjct: 466 RVIRLMPNLPCSVKQGAAAFSCGEKATREDADLVHQ 501
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 37.1 bits (82), Expect = 0.023
Identities = 21/55 (38%), Positives = 23/55 (41%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLS 927
P P PP P P PPPP PP P T + G+P SP G G S
Sbjct: 684 PPPPPPPPPPPP-----PPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTS 733
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P P PPPP P
Sbjct: 693 PPPPPPPPPQPSTPPPPPPSTP 714
Score = 29.1 bits (62), Expect = 6.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 722 LPPHPPXPXPSXXXXPPPP 778
+PP PP P P PPPP
Sbjct: 682 VPPPPPPPPPPPPPPPPPP 700
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPP 778
PP PP P P PPPP
Sbjct: 684 PPPPPPPPPPPPPPPPPP 701
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPP 778
PP PP P P PPPP
Sbjct: 692 PPPPPPPPPPQPSTPPPP 709
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 35.9 bits (79), Expect = 0.053
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSP 930
P P PP +P P + N +PPPP P P +P+ P P +P
Sbjct: 130 PPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNP 185
Score = 35.5 bits (78), Expect = 0.070
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKP 918
P P PP P P N +PPPP PP P + +P+ P P
Sbjct: 98 PYPPYPPPPPYPPPPNPPYPPPP--NAPYPPPPNPPYPPPPNAPYPPSPNAP 147
Score = 34.3 bits (75), Expect = 0.16
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P N +PPPP PP P
Sbjct: 177 PPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNP 209
Score = 33.1 bits (72), Expect = 0.37
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPP-XPXTGFSRXXGSPFSPLGXKP 918
P P PP P P N +PPPP PP P + +P P P
Sbjct: 185 PPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPPP 237
Score = 32.7 bits (71), Expect = 0.49
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +1
Query: 763 PXXPXP--PXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSPL 933
P P P P P P N +PPPP PP P + +P+ P P PL
Sbjct: 104 PPPPYPPPPNPPYPPPPNAPYPPPP--NPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPL 160
Score = 32.7 bits (71), Expect = 0.49
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +2
Query: 608 PXXPXGPPI-PPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPP 778
P P PP+ PPP P P+ + PP+PP P P PPPP
Sbjct: 152 PNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPP--NPPYPPPPNPPYPPPPNAPNPPPP 207
Score = 31.9 bits (69), Expect = 0.86
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +2
Query: 617 PXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPPLXXP 790
P PP PPP P P + L P PP P P PPPP P
Sbjct: 127 PPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPP--PLYPPPPNPPPPNAPYPPPPYPPP 182
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P N +PPPP PP P
Sbjct: 159 PLYPPPPNPPPP---NAPYPPPPYPPPPNPPYP 188
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +2
Query: 581 GGXPAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXX 760
GG P P P PP PP P P PP+PP P P
Sbjct: 81 GGHPPTNFSPNPPYPPPPYPPYPPPPPYPP------------------PPNPPYPPPPNA 122
Query: 761 XXPPPP 778
PPPP
Sbjct: 123 PYPPPP 128
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 617 PXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPP 778
P PP PPP P P A PP+PP P PPPP
Sbjct: 190 PPNPPYPPPPNAPNPPPPNPPYPPPPN------APNPPYPPPPNAPNPPYPPPP 237
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/66 (24%), Positives = 23/66 (34%)
Frame = +1
Query: 706 EXPCXLTSXXXXXXXXXXXPXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXX 885
+ PC +++ P P PP P +PPPP PP P +
Sbjct: 71 DAPCLVSAKCGGHPPTNFSPNPPYPPPPYPPYPPPPPYPPPPNP--PYPPPPNAPYPPPP 128
Query: 886 GSPFSP 903
P+ P
Sbjct: 129 NPPYPP 134
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +1
Query: 763 PXXPXP--PXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSP 930
P P P P +P P N +PPPP PP P + P+ P P +P
Sbjct: 112 PNPPYPPPPNAPYPPPPNPPYPPPP--NAPYPPSPNAPYPPPPNPPYPPPLYPPPPNP 167
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 35.5 bits (78), Expect = 0.070
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +2
Query: 626 PPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPPLXXP 790
PP PPP LP A LPP PP P P PPPP P
Sbjct: 696 PPPPPPPPLLSGTLPMPPPPPPPP---PGCAGLPPPPPSPQPGCAGLPPPPPPPP 747
Score = 33.5 bits (73), Expect = 0.28
Identities = 21/54 (38%), Positives = 21/54 (38%)
Frame = +2
Query: 617 PXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPP 778
P PP PPP P P S A LPP PP P P PPPP
Sbjct: 712 PPPPPPPPPGCAGLPPPP-----PSPQ---PGCAGLPPPPPPPPPGCAGLPPPP 757
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = +1
Query: 772 PXPPXSPXPLAQNLXHPPPP----CXXXKXPPXP 861
P PP SP P L PPPP C PP P
Sbjct: 726 PPPPPSPQPGCAGLPPPPPPPPPGCAGLPPPPPP 759
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +1
Query: 772 PXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSP 930
P PP P PL PPP PP P G + P SP GL P
Sbjct: 695 PPPPPPPPPLLSGTLPMPPP------PPPPPPGCAGLPPPPPSPQPGCAGLPP 741
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSPL 933
P P PP L PPPP PP P + G P P PG + L
Sbjct: 697 PPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGL 753
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 34.3 bits (75), Expect = 0.16
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 807 LGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIG 628
+G G G RG GG +G G GGWG R + + G G GGG+G
Sbjct: 245 MGQGPRGWGRGSGGGWG-QGPG-GGWGRGQGRGMGRGPGGGWGRGSG-GGWGRMQGGGMG 301
Query: 627 -GPXGXXG 607
GP G G
Sbjct: 302 RGPGGGWG 309
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 34.3 bits (75), Expect = 0.16
Identities = 41/176 (23%), Positives = 48/176 (27%), Gaps = 3/176 (1%)
Frame = +2
Query: 503 KAQLPXVAVLKPQXKTXHXPH-SLFQGGGXPAXTVXPXXPXGPPIPP-PXXXRXPALPFX 676
K + KP+ K P S P P P PP PP P P P
Sbjct: 161 KPPVTETTTTKPETKPPKPPAPSTIPTPPTPPAPPSPPIPTAPPTPPMPETPLPPGSPHI 220
Query: 677 CXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPPLXXPXXXXXXXXXXXXXXVXXTXXPX 856
+PP PP P + PP P + P
Sbjct: 221 PPAPLHP-------HIPPAPPNPSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPA 273
Query: 857 XPXXGFPAXXGHLFPLWXXNPASPLSRXQPA-XXLLXPXTPPSTXXHNTXPXXFPP 1021
P PA PL NP P PA L P PP+ P + P
Sbjct: 274 PPNPSIPAPPNPSIPLAPPNPYIP-----PAPPNLFIPSAPPNPHIPPAPPNPYIP 324
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 915 TRPLPSRXXNXRPXFSXPXPPXPPXXTTPXXPXFPPLP 1028
++P + +P P PP P TP P PP P
Sbjct: 160 SKPPVTETTTTKPETKPPKPPAPSTIPTPPTPPAPPSP 197
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 966 PXPPXPPXXTTPXXPXFPPLP 1028
P PP PP P P PP+P
Sbjct: 189 PTPPAPPSPPIPTAPPTPPMP 209
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 34.3 bits (75), Expect = 0.16
Identities = 26/81 (32%), Positives = 28/81 (34%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXR 652
GGG G G RGGGG G G GG+GG G G
Sbjct: 138 GGGGYRSGGGYRGGGGYRGGGGGYRGRGRGGGGYGG--------GGYGGGGYGGGGHGGG 189
Query: 651 XXXGGGIGGPXGXXGXTVMAG 589
GGG GG G G + G
Sbjct: 190 GYGGGGYGGGGGGYGGSGYGG 210
Score = 31.1 bits (67), Expect = 1.5
Identities = 31/100 (31%), Positives = 33/100 (33%)
Frame = -3
Query: 1023 GGGKXXGXVLWXXVXGGVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXF 844
GGG+ G GG G RG G RG R G G G
Sbjct: 124 GGGRRGGGYGGGRGGGGGYRSGGGYRGGGGYRGGGGGYRGRG-RGGGGYGGGGYGGGGYG 182
Query: 843 VXXTGGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGG 724
GGG G G G GG G G G GG+GG
Sbjct: 183 GGGHGGGGYGGG-GYGGGGGGYGGSGYGGGGGYGGGGYGG 221
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.9 bits (74), Expect = 0.21
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +2
Query: 608 PXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPPLXX 787
P P PP PPP P P PP PP P P PPPP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 788 P 790
P
Sbjct: 429 P 429
Score = 33.9 bits (74), Expect = 0.21
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP SP P Q PPPP PP P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 33.5 bits (73), Expect = 0.28
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +2
Query: 608 PXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPPLXX 787
P P PP PPP P P PP PP P P PPPP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQ---PPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Query: 788 P 790
P
Sbjct: 422 P 422
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = +2
Query: 590 PAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXP 769
P P P PP PPP P P PP PP P P+ P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP-PAPPPPP 424
Query: 770 PPPLXXP 790
PPP P
Sbjct: 425 PPPPPPP 431
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P PPPP PP P
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPP 408
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P PPPP PP P
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 921 PLPSRXXNXRPXFSXPXPPXPPXXTTPXXPXFPPLP 1028
P PS +P P PP PP P P PP P
Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P PPPP PP P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPP 402
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P PPPP PP P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPP 410
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P PPPP PP P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +2
Query: 590 PAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXP 769
P P P PP PPP P P PP P P P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 770 PPP 778
PPP
Sbjct: 430 PPP 432
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P PPPP PP P
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P PPPP PP P
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P PPPP PP P
Sbjct: 393 PQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P PPPP PP P
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 951 PXFSXPXPPXPPXXTTPXXPXFPPLP 1028
P S P PP PP + P P PP P
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPP 399
>SB_44923| Best HMM Match : Fibrillarin (HMM E-Value=0)
Length = 304
Score = 33.5 bits (73), Expect = 0.28
Identities = 23/51 (45%), Positives = 24/51 (47%)
Frame = -1
Query: 923 RPGFXPRGEKGDPXXRENPVXGXGGXLXXXQGGGGCXKFWARGXGEXGGXG 771
RPGF PRG G R P GG +GGGG K RG G GG G
Sbjct: 34 RPGFSPRG-AGRGGGRGGP---RGGGRGGGRGGGGGFKS-PRGGGRGGGRG 79
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 33.5 bits (73), Expect = 0.28
Identities = 23/78 (29%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Frame = +2
Query: 566 SLFQGGGXPAXTVXPXXPXGPPIP---PPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHP 736
+++ GG P GPP P PP R A F S PP P
Sbjct: 700 TIWVSGGPPLSAPPLSSTLGPPPPAPPPPPLGRDSAAVFMLTWTPLTNTSSAANVPPPPP 759
Query: 737 PXPXPSXXXXPPPPLXXP 790
P P PPPP P
Sbjct: 760 PPAVPGEGARPPPPPPPP 777
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 33.5 bits (73), Expect = 0.28
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGF 873
P P PP P PLA L PPP P P G+
Sbjct: 229 PPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPPPTLGY 265
Score = 33.1 bits (72), Expect = 0.37
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = +2
Query: 626 PPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPPLXXP 790
PP P R A+ S S + PP PP P PS PPPP P
Sbjct: 172 PPTRLPGNARVNAIDQISIGTSHPTSPSQITQPPPPPPRPPPSPPPPPPPPSPSP 226
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P PS PPPP P
Sbjct: 216 PPPPPPPSPSPPRPPPPPPPSP 237
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +2
Query: 608 PXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPP 778
P P PP PPP P P S LA P PP P P+ PPP
Sbjct: 209 PRPPPSPPPPPPPPSPSPPRPPPPPPPSPP---RPLAAKLPEPP-PIPNMPPTLPPP 261
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 948 RPXFSXPXPPXPPXXTTPXXPXFPP 1022
RP S P PP PP + P P PP
Sbjct: 210 RPPPSPPPPPPPPSPSPPRPPPPPP 234
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.1 bits (72), Expect = 0.37
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 3/70 (4%)
Frame = +2
Query: 578 GGGXPAXTVXPXX---PXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPX 748
GG P + P P PPI P PA+P PP PP P
Sbjct: 149 GGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPP 208
Query: 749 PSXXXXPPPP 778
P PPP
Sbjct: 209 PILELAAPPP 218
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSP 903
P P PP +P +Q PPPP P P + G P P
Sbjct: 108 PTPPPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPP 154
Score = 29.9 bits (64), Expect = 3.5
Identities = 24/85 (28%), Positives = 27/85 (31%)
Frame = +2
Query: 536 PQXKTXHXPHSLFQGGGXPAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXL 715
PQ + P + G P T P PPP R P P S
Sbjct: 78 PQTQASTAPPLVPAGVEAPTPTPMVAQSVAPTPPPPP--RAPETPSQAPSPPPPPT-SPA 134
Query: 716 AXLPPHPPXPXPSXXXXPPPPLXXP 790
PP PP P+ PPPP P
Sbjct: 135 TRAPPPPPPIAPATGGPPPPPPIAP 159
Score = 28.7 bits (61), Expect = 8.0
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = +1
Query: 772 PXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSPLA 936
P PP P A PPPP P P + G P P P ++P A
Sbjct: 124 PSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPP----PPIAPAA 174
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 778 PPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGF 873
PP P PL PPPP PP P GF
Sbjct: 676 PPPPPPPLPGGAAPPPPPPIGGGAPPPPPPGF 707
Score = 29.1 bits (62), Expect = 6.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPP 778
PP PP P P PPPP
Sbjct: 676 PPPPPPPLPGGAAPPPPP 693
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 32.3 bits (70), Expect = 0.65
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 924 LPSRXXNXRPXFSXPXPPXPPXXTTPXXPXFPPLP 1028
+PSR RP P PP P T P P PP+P
Sbjct: 795 IPSRPPGARPT---PPPPPPGKPTKPTKPSLPPVP 826
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.3 bits (70), Expect = 0.65
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +1
Query: 772 PXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPG 921
P PP P A + PPPP PP P G + G PL PG
Sbjct: 931 PLPPPPPGGSAPS--QPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPG 978
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.3 bits (70), Expect = 0.65
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTG 870
P P SP P N PPPP PP P G
Sbjct: 348 PPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNG 383
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +1
Query: 763 PXXPXPPXS---PXPLAQNLXHPPPPCXXXKXPPXPXT 867
P P PP + P P N PPPP PP P T
Sbjct: 354 PPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPT 391
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +1
Query: 763 PXXPXPPXS---PXPLAQNLXHPPPPCXXXKXPPXPXT 867
P P PP + P P N PPPP PP P T
Sbjct: 374 PPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPT 411
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 32.3 bits (70), Expect = 0.65
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGW-GGKXARXLHHQXXEXXXQXXGKAGX 655
GGG G G G GGG EG G GG GG + G AG
Sbjct: 1770 GGGMAGGGGGMGGGGMAAGGGEFGGGEGMGGGGMAGGGGGMGGGGGGMGGGGEGMGAAGG 1829
Query: 654 RXXXGGGIGGPXGXXG 607
GG GG G G
Sbjct: 1830 GMGAGGEGGGAGGGGG 1845
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P PS PPPP P
Sbjct: 1160 PPPPPPPPPSSPSPPPPPPPPP 1181
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 772 PXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXT 867
P PP P P + PPPP PP P T
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPPPPPTPTT 1188
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P P PPPP P
Sbjct: 1159 PPPPPPPPPPSSPSPPPPPPPP 1180
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGG 724
GGG G G G GGGG G G GG GG
Sbjct: 839 GGGYADGDGGGGGGGGGGGGGGGGGGGGGGGGGGGG 874
Score = 29.5 bits (63), Expect = 4.6
Identities = 25/79 (31%), Positives = 28/79 (35%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXR 652
GGG G G G GGGG +G G G GG + G G
Sbjct: 804 GGGYGDGDGGGGGGGGGGGGGG----DGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGG 859
Query: 651 XXXGGGIGGPXGXXGXTVM 595
GGG GG G G V+
Sbjct: 860 GGGGGGGGGGGGGGGGGVI 878
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 31.1 bits (67), Expect = 1.5
Identities = 26/79 (32%), Positives = 27/79 (34%)
Frame = -3
Query: 978 GGVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLGX 799
GG G R G E AG RG G+ G G GGG G
Sbjct: 127 GGRGGWRGRGGG---EGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEGGGGRGR 183
Query: 798 GXXGXXRGGGGXXXXEGXG 742
G G RGGGG G G
Sbjct: 184 GTGGGSRGGGGDGRGRGRG 202
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
Frame = -3
Query: 798 GXXGXXRGGG---GXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIG 628
G G GGG G G G GGWGG+ E G GGG G
Sbjct: 137 GGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEGGGGRGRGTGGGSRGGGGDG 196
Query: 627 GPXGXXG 607
G G
Sbjct: 197 RGRGRGG 203
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P P PPPP P
Sbjct: 470 PPPPPPPPPPPPPPPPPPFPPP 491
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 966 PXPPXPPXXTTPXXPXFPPLP 1028
P PP PP P P FPP P
Sbjct: 472 PPPPPPPPPPPPPPPPFPPPP 492
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P PP P P PPPP PP P
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPPPPFPPPPPPTP 496
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P P PPPP P
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPP 485
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P P PPPP P
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPP 486
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P P PPPP P
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPP 487
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P P PPPP P
Sbjct: 468 PPPPPPPPPPPPPPPPPPPPFP 489
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P P PPPP P
Sbjct: 469 PPPPPPPPPPPPPPPPPPPFPP 490
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P P PPPP P
Sbjct: 475 PPPPPPPPPPPPPFPPPPPPTP 496
>SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6)
Length = 479
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 906 GXKTRPLPSRXXNXRPXFSXPXPPXPPXXTTPXXPXFPPLP 1028
G RP P+ R P PP PP P P PP P
Sbjct: 404 GRTIRPFPTPNRRRRRSLVQPPPPPPPAPLPPPPPP-PPQP 443
>SB_56663| Best HMM Match : F420_oxidored (HMM E-Value=0)
Length = 630
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 421 LSQQSNRICLL-RARVIRVMPNTPALVKEG 507
+S +S CL ++RV+RVMPN P LV+ G
Sbjct: 458 VSLKSMEKCLPHKSRVVRVMPNIPTLVRAG 487
>SB_15225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGK 721
GGG + +G G GGG EG G GG G+
Sbjct: 45 GGGMAGEGMGRGGMAGEGMGGGGMAGEGMGRGGMAGE 81
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGK 721
GGG + +G G GGG EG G GG G+
Sbjct: 65 GGGMAGEGMGRGGMAGEGMGGGGMAGEGMGRGGIAGE 101
Score = 28.7 bits (61), Expect = 8.0
Identities = 23/86 (26%), Positives = 28/86 (32%)
Frame = -3
Query: 978 GGVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLGX 799
GG+ G R G E G G AG+ GGG + +G
Sbjct: 36 GGIAGGRMGGGGMAGEGMGRGGMAGEGMGGGGMAGEGMGRGGMAGEGMGGGGMAGEGMGR 95
Query: 798 GXXGXXRGGGGXXXXEGXGXGGWGGK 721
G GGG EG GG G+
Sbjct: 96 GGIAGEGMGGGGMAGEGMSRGGIAGE 121
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 30.3 bits (65), Expect = 2.6
Identities = 32/132 (24%), Positives = 40/132 (30%)
Frame = +2
Query: 626 PPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPPLXXPXXXXX 805
PP PP R P +P S + + PP PP PS PP P
Sbjct: 261 PPRYPPSPLRYPPIP-PRYPPSLIRYPTLPPRYPPSPPRYPPSPPRYPPSLHRYPQSPLR 319
Query: 806 XXXXXXXXXVXXTXXPXXPXXGFPAXXGHLFPLWXXNPASPLSRXQPAXXLLXPXTPPST 985
+ P P +P+ P P SP P P PPS
Sbjct: 320 YPPSPIRYPPLPSRYPPSPPR-YPSSHPRYPPSPPRYPPSP-----PRYPSSHPRYPPSP 373
Query: 986 XXHNTXPXXFPP 1021
+ P +PP
Sbjct: 374 LRYLPSPIRYPP 385
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = +2
Query: 608 PXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPPLXX 787
P P PP PP R P P S + + PP PP S PP P
Sbjct: 297 PRYPPSPPRYPPSLHRYPQSPLR-YPPSPIRYPPLPSRYPPSPPRYPSSHPRYPPSPPRY 355
Query: 788 P 790
P
Sbjct: 356 P 356
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPLXXP 790
PP PP P P PPPP P
Sbjct: 54 PPPPPPPPPPPPPPPPPPSSSP 75
>SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)
Length = 186
Score = 29.9 bits (64), Expect = 3.5
Identities = 24/80 (30%), Positives = 25/80 (31%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXR 652
GGG G G GGGG G GG GG + G G
Sbjct: 53 GGGATGGGATGGGGGATGGGGGATGGHGGATGGGGGATG--------DGGGATGGGGGAT 104
Query: 651 XXXGGGIGGPXGXXGXTVMA 592
GG GG G G V A
Sbjct: 105 GGGGGATGGHGGATGGGVGA 124
Score = 29.1 bits (62), Expect = 6.1
Identities = 28/88 (31%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Frame = -3
Query: 861 GXXGXFVXXTGGGRVPQVLGXGXXGXXRG--GGGXXXXEGXGXGGWGGKXARXLHHQXXE 688
G G TGGG G G G G GGG G G GG A H
Sbjct: 74 GATGGHGGATGGGGGATGDGGGATGGGGGATGGGGGATGGHGGATGGGVGATGGHGGATG 133
Query: 687 XXXQXXGKAGXRXXXGGG-IGGPXGXXG 607
G G GGG GG G G
Sbjct: 134 GHGGATGGHGGATGGGGGATGGGGGATG 161
>SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05)
Length = 267
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGK 721
GGG G G G GGGG G G GG+G +
Sbjct: 94 GGGGGGGFGGGGGGGFGGGGGGGGGFGGGGGGGFGSR 130
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = +2
Query: 578 GGGXPAXTVXPXXPXGPPIP-PPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPS 754
GG P + GPP P PP P++P W + +PP PP
Sbjct: 384 GGPPPPWSKPGGILPGPPPPGPPMLNMAPSIPP---------WQTTPGYIPPPPPGFPQF 434
Query: 755 XXXXPPPPLXXP 790
PPPP P
Sbjct: 435 QPPPPPPPSDAP 446
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 29.5 bits (63), Expect = 4.6
Identities = 22/77 (28%), Positives = 25/77 (32%)
Frame = -3
Query: 930 RGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLGXGXXGXXRGGGGXXXXE 751
RGE G R G G + GGG G G G RGGG
Sbjct: 83 RGERGAGGSRAGGYRSGGGGYGGSSRGGYGGGRGGGGYGGGRGGGGYGGGRGGGYGGGRR 142
Query: 750 GXGXGGWGGKXARXLHH 700
G G GG R ++
Sbjct: 143 DYGGGSKGGGYDRNSYY 159
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 804 GXGXXGXXRGGGGXXXXEGXGXGGWGGK 721
G G G RGGGG G G G GG+
Sbjct: 207 GGGGYGGGRGGGGYGGGHGGGGYGGGGR 234
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.5 bits (63), Expect = 4.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPL 781
PP PP P P PPPP+
Sbjct: 103 PPPPPPPPPPPPPPPPPPI 121
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPP 778
PP PP P P PPPP
Sbjct: 102 PPPPPPPPPPPPPPPPPP 119
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.5 bits (63), Expect = 4.6
Identities = 23/77 (29%), Positives = 25/77 (32%)
Frame = +2
Query: 560 PHSLFQGGGXPAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPP 739
PH + QGGG P P P PP P P + PP P
Sbjct: 442 PHGMPQGGGPPQL------PPNLPPPPGGMRGMPPPPMGM--------YPPPRGFPPPPF 487
Query: 740 XPXPSXXXXPPPPLXXP 790
P P PPPP P
Sbjct: 488 GPPPPFYRGPPPPRGMP 504
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 6/58 (10%)
Frame = +1
Query: 763 PXXPXPPXS------PXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKP 918
P P PP P L NL PPPP PP P + G P P G P
Sbjct: 436 PPQPRPPHGMPQGGGPPQLPPNL--PPPPGGMRGMPPPPMGMYPPPRGFPPPPFGPPP 491
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +1
Query: 778 PPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSP 930
PP P P A PPPP PP P + P P P P
Sbjct: 51 PPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQP 101
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 823 PPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSP 930
PPP + P P G +R S SPLG P + P
Sbjct: 2140 PPPMGSSRYGPPPPMGPARHSPSGPSPLGAPPSVPP 2175
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.1 bits (62), Expect = 6.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPP 778
PP PP P P PPPP
Sbjct: 317 PPPPPPPPPGDGGAPPPP 334
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 930 SRXXNXRPXFSXPXPPXPPXXTTPXXPXFPP 1022
SR RP P PP PP P P PP
Sbjct: 855 SRYRRPRPRPRRPPPPPPPPPPPPPPPPPPP 885
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPP 778
PP PP P P PPPP
Sbjct: 867 PPPPPPPPPPPPPPPPPP 884
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPP 778
PP PP P P PPPP
Sbjct: 868 PPPPPPPPPPPPPPPPPP 885
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 789 GXXRGGGGXXXXEGXGXGGWGGK 721
G RGGGG G G GG GG+
Sbjct: 338 GSGRGGGGGGGGGGGGGGGGGGR 360
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 28.7 bits (61), Expect = 8.0
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = -3
Query: 852 GXFVXXTGGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQX 673
G + +GGG G G RGGGG G GG+GG R + +
Sbjct: 749 GGYGNRSGGGYRGGGGYGGGGGGYRGGGGYGGGH-RGGGGYGGGGHRGGSYSGYRGSYKS 807
Query: 672 XGKAGXRXXXGGGIGG 625
G G G GG
Sbjct: 808 GGYGQGSGGYGQGSGG 823
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 24.2 bits (50), Expect(2) = 8.6
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Frame = +2
Query: 659 PALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXP-PPPLXXP 790
P P S S A PP PP P P P PP P
Sbjct: 504 PCAPSCAPTYSPSCCGSYPAPQPPSPPAPPPKPAPPPRSPPAAAP 548
Score = 22.6 bits (46), Expect(2) = 8.6
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 608 PXXPXGPPIPPPXXXRXPAL 667
P P PP PPP + P +
Sbjct: 454 PQGPPPPPPPPPQMYQQPLM 473
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,090,669
Number of Sequences: 59808
Number of extensions: 516697
Number of successful extensions: 3273
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2523
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3071064787
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -