Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O06
         (1028 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    29   0.17 
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    27   1.2  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   6.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 0.17
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGK 721
           GGGR  +    G  G  RG GG     G G GG+G +
Sbjct: 66  GGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDR 102



 Score = 27.5 bits (58), Expect = 0.69
 Identities = 19/66 (28%), Positives = 23/66 (34%)
 Frame = -3

Query: 774 GGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGGPXGXXGXTVM 595
           GG     +G G GG GG+  R              G+ G     GGG G   G  G    
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRG---GGRGRGRGRGGRDGGGGFGGGGYGDRNGDGGRPAY 111

Query: 594 AGXPPP 577
           +G   P
Sbjct: 112 SGNSDP 117


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 19/56 (33%), Positives = 20/56 (35%)
 Frame = -3

Query: 774 GGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGGPXGXXG 607
           GGG     G G GG  G     LHH       Q   K G     G G+GG     G
Sbjct: 253 GGGTGGSGGAGSGGSSGNLGSHLHH--PSIVSQNDLKLGL-GGMGVGVGGNLSMMG 305


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.6
 Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 8/74 (10%)
 Frame = +2

Query: 584 GXPAXTVXPXXPXG-----PP--IPPPXXX-RXPALPFXCXXXSXX*WWSXLAXLPPHPP 739
           G P     P  P G     PP  +PPP    R P  P           +  L    P P 
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPA 584

Query: 740 XPXPSXXXXPPPPL 781
            P P     PP PL
Sbjct: 585 PPPPPPMGPPPSPL 598



 Score = 24.2 bits (50), Expect = 6.4
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 560 PHSLFQGGGXPAXTVXPXXPXGPPIPPPXXXRXPALPF 673
           P+ L  GG  P  T+    P   P+P P     P + F
Sbjct: 614 PNLLGFGGAAPPVTILVPYPIIIPLPLPIPVPIPVIDF 651


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = -3

Query: 804 GXGXXGXXRGGGGXXXXEGXGXG-GWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGI 631
           G    G   GGGG     G G G G GG   R   H+  +   +  G  G     GGG+
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGGG---RDRDHRDRDREREGGGNGG---GGGGGM 257


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -3

Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWG 727
           GGG V    G G      GG G     G   GG G
Sbjct: 672 GGGAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGG 706


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,979
Number of Sequences: 2352
Number of extensions: 16235
Number of successful extensions: 53
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 113874423
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)