Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O06
(1028 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67995-1|CAA91943.1| 279|Caenorhabditis elegans Hypothetical pr... 43 3e-04
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 41 0.002
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 41 0.002
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 41 0.002
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 40 0.002
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 40 0.002
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 37 0.020
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 36 0.047
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 35 0.082
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 34 0.14
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 34 0.19
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.25
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.25
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.25
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.33
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.33
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.33
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.33
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 33 0.44
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.44
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 32 0.58
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 32 0.58
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 32 0.76
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.76
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.76
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 1.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.3
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 1.3
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.8
AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical ... 31 1.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.8
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.3
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.3
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 3.1
AF067209-1|AAC16982.2| 553|Caenorhabditis elegans Warthog (hedg... 29 4.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 25 5.0
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 5.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 5.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.4
U41033-6|AAA82378.1| 859|Caenorhabditis elegans Hypothetical pr... 29 5.4
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 5.4
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 25 5.7
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 25 6.2
L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family ... 29 7.1
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 29 7.1
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 28 9.4
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 28 9.4
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 28 9.4
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 28 9.4
AF039048-2|AAB94238.1| 85|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z67995-1|CAA91943.1| 279|Caenorhabditis elegans Hypothetical
protein M153.1 protein.
Length = 279
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +2
Query: 119 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPSDVASAKAFQGLGATALFEN 286
MKIGFIG G++A ALA G I++G D I AS D + LG +N
Sbjct: 1 MKIGFIGAGKMAQALARGLINSGRITADNIIASSPKRDEVFLDQCKALGLNTTHDN 56
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 454 RARVIRVMPNTPALVKEG 507
++RV+RVMPNTP++V+ G
Sbjct: 111 KSRVVRVMPNTPSVVRAG 128
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 384 KNKLFISVAMGITIATVESNLPSE 455
K L +S+A+GITI +ES LP++
Sbjct: 88 KEHLVVSIALGITIRNIESLLPTK 111
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 40.7 bits (91), Expect = 0.002
Identities = 37/121 (30%), Positives = 41/121 (33%), Gaps = 4/121 (3%)
Frame = -3
Query: 966 GXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQ----VLGX 799
G R G G G QRG P G P G G + GGG Q G
Sbjct: 214 GQRGGYNGGGGGGGGWGGPAQRGG--PGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW 271
Query: 798 GXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGGPX 619
G +GGGG G G GGWGG + G G + GG GG
Sbjct: 272 GGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGGQS 331
Query: 618 G 616
G
Sbjct: 332 G 332
Score = 31.1 bits (67), Expect = 1.3
Identities = 33/128 (25%), Positives = 42/128 (32%), Gaps = 2/128 (1%)
Frame = -3
Query: 984 VXGGVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVL 805
V G+ A R+R G + G+R G G G G G
Sbjct: 186 VRKGLSKDEMSKAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPG 245
Query: 804 GXGXXGXXRGGGGXXXXE-GXGXGGWGG-KXARXLHHQXXEXXXQXXGKAGXRXXXGGGI 631
G G G GG + G G GGWGG + + + G G + GG
Sbjct: 246 GGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGW 305
Query: 630 GGPXGXXG 607
GGP G
Sbjct: 306 GGPQQGGG 313
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 40.7 bits (91), Expect = 0.002
Identities = 37/121 (30%), Positives = 41/121 (33%), Gaps = 4/121 (3%)
Frame = -3
Query: 966 GXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQ----VLGX 799
G R G G G QRG P G P G G + GGG Q G
Sbjct: 176 GQRGGYNGGGGGGGGWGGPAQRGG--PGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW 233
Query: 798 GXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGGPX 619
G +GGGG G G GGWGG + G G + GG GG
Sbjct: 234 GGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGGQS 293
Query: 618 G 616
G
Sbjct: 294 G 294
Score = 31.1 bits (67), Expect = 1.3
Identities = 33/128 (25%), Positives = 42/128 (32%), Gaps = 2/128 (1%)
Frame = -3
Query: 984 VXGGVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVL 805
V G+ A R+R G + G+R G G G G G
Sbjct: 148 VRKGLSKDEMSKAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPG 207
Query: 804 GXGXXGXXRGGGGXXXXE-GXGXGGWGG-KXARXLHHQXXEXXXQXXGKAGXRXXXGGGI 631
G G G GG + G G GGWGG + + + G G + GG
Sbjct: 208 GGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGW 267
Query: 630 GGPXGXXG 607
GGP G
Sbjct: 268 GGPQQGGG 275
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 40.7 bits (91), Expect = 0.002
Identities = 37/121 (30%), Positives = 41/121 (33%), Gaps = 4/121 (3%)
Frame = -3
Query: 966 GXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQ----VLGX 799
G R G G G QRG P G P G G + GGG Q G
Sbjct: 214 GQRGGYNGGGGGGGGWGGPAQRGG--PGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW 271
Query: 798 GXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGGPX 619
G +GGGG G G GGWGG + G G + GG GG
Sbjct: 272 GGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGGQS 331
Query: 618 G 616
G
Sbjct: 332 G 332
Score = 31.1 bits (67), Expect = 1.3
Identities = 33/128 (25%), Positives = 42/128 (32%), Gaps = 2/128 (1%)
Frame = -3
Query: 984 VXGGVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVL 805
V G+ A R+R G + G+R G G G G G
Sbjct: 186 VRKGLSKDEMSKAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPG 245
Query: 804 GXGXXGXXRGGGGXXXXE-GXGXGGWGG-KXARXLHHQXXEXXXQXXGKAGXRXXXGGGI 631
G G G GG + G G GGWGG + + + G G + GG
Sbjct: 246 GGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGW 305
Query: 630 GGPXGXXG 607
GGP G
Sbjct: 306 GGPQQGGG 313
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/122 (30%), Positives = 41/122 (33%), Gaps = 5/122 (4%)
Frame = -3
Query: 966 GXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLGXGXXG 787
G R G G G QRG P G P G G + GG Q G G G
Sbjct: 176 GQRGGYNGGGGGGGGWGGPAQRGG--PGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGG 233
Query: 786 XX-----RGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGGP 622
+GGGG G G GGWGG + G G + GG GG
Sbjct: 234 WGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGGQ 293
Query: 621 XG 616
G
Sbjct: 294 SG 295
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/122 (30%), Positives = 41/122 (33%), Gaps = 5/122 (4%)
Frame = -3
Query: 966 GXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLGXGXXG 787
G R G G G QRG P G P G G + GG Q G G G
Sbjct: 214 GQRGGYNGGGGGGGGWGGPAQRGG--PGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGG 271
Query: 786 XX-----RGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGGP 622
+GGGG G G GGWGG + G G + GG GG
Sbjct: 272 WGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGGQ 331
Query: 621 XG 616
G
Sbjct: 332 SG 333
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 37.1 bits (82), Expect = 0.020
Identities = 22/66 (33%), Positives = 24/66 (36%)
Frame = -3
Query: 804 GXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGG 625
G G G GGGG +G GGWGG+ Q G GGG GG
Sbjct: 187 GGGQGGNQGGGGGRGGNQGGEQGGWGGQGG----SQGGSQGGSQGGWGNQGGQQGGGRGG 242
Query: 624 PXGXXG 607
G G
Sbjct: 243 QQGPGG 248
Score = 33.1 bits (72), Expect = 0.33
Identities = 26/92 (28%), Positives = 32/92 (34%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXR 652
GG + Q G G G GG +G GGWGG+ G+ G +
Sbjct: 149 GGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGG----QGGNQGGGGGRGGNQ 204
Query: 651 XXXGGGIGGPXGXXGXTVMAGXPPPWKRL*GQ 556
GG GG G G + G W GQ
Sbjct: 205 GGEQGGWGGQGGSQGGS-QGGSQGGWGNQGGQ 235
Score = 32.7 bits (71), Expect = 0.44
Identities = 32/124 (25%), Positives = 37/124 (29%)
Frame = -3
Query: 978 GGVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLGX 799
GG G +G R G G G +G G G + GG G
Sbjct: 53 GGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGS 112
Query: 798 GXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGGPX 619
GG G G GGWGG+ Q G + GGG GG
Sbjct: 113 QGGSSGGWGGSSRSDSGSGQGGWGGQ-------QGGNSNAGGWGGSQGGQNGGGGRGGSG 165
Query: 618 GXXG 607
G G
Sbjct: 166 GQGG 169
Score = 32.3 bits (70), Expect = 0.58
Identities = 34/125 (27%), Positives = 42/125 (33%), Gaps = 1/125 (0%)
Frame = -3
Query: 978 GGVXGXRXXXAGXXRERGEAGFXX-QRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLG 802
GG G + G G+ G+ Q G G+ G G GGGR G
Sbjct: 149 GGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGN--QGGGGGRGGNQ-G 205
Query: 801 XGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGGP 622
G GG +G GGWG +Q + G+ G GGG GG
Sbjct: 206 GEQGGWGGQGGSQGGSQGGSQGGWG--------NQGGQQGGGRGGQQGPGGWGGGGRGGG 257
Query: 621 XGXXG 607
G G
Sbjct: 258 WGGWG 262
Score = 31.9 bits (69), Expect = 0.76
Identities = 24/79 (30%), Positives = 27/79 (34%)
Frame = -3
Query: 852 GXFVXXTGGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQX 673
G TGGGR G G G RGGG G G G GG + +
Sbjct: 46 GASAGGTGGGRGG---GRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSA 102
Query: 672 XGKAGXRXXXGGGIGGPXG 616
G G + GG G G
Sbjct: 103 GGWGGSQGGSQGGSSGGWG 121
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/91 (30%), Positives = 33/91 (36%), Gaps = 6/91 (6%)
Frame = -3
Query: 978 GGVXGXRXXXAGXXRERG--EAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVL 805
GG G + G +G + G+ Q G + G G G GGGR Q
Sbjct: 188 GGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQ--GGWGNQGGQQGGGRGGQQG 245
Query: 804 GXGXXGXXRGGG----GXXXXEGXGXGGWGG 724
G G RGGG G G G WGG
Sbjct: 246 PGGWGGGGRGGGWGGWGRGSRWGWGRPSWGG 276
Score = 28.7 bits (61), Expect = 7.1
Identities = 33/124 (26%), Positives = 39/124 (31%)
Frame = -3
Query: 978 GGVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLGX 799
GG G + G+ G+ Q+G AG G G GGG G
Sbjct: 114 GGSSGGWGGSSRSDSGSGQGGWGGQQGGN--SNAG----GWGGSQGGQNGGGGRGGSGGQ 167
Query: 798 GXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGGPX 619
G G + GG G GG GG + Q G G GG GG
Sbjct: 168 GGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQ-GGWGGQGGSQGGSQGGSQ 226
Query: 618 GXXG 607
G G
Sbjct: 227 GGWG 230
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 35.9 bits (79), Expect = 0.047
Identities = 22/59 (37%), Positives = 22/59 (37%)
Frame = -3
Query: 900 GKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGG 724
G R G G G GGGR G G G GGGG G G G WGG
Sbjct: 37 GNRWGGGGGPGGWGNNGGGGWGRGGGR-----GGGDWGGNNGGGGNWGGNGGGRGDWGG 90
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 861 GXXGXFVXXTGGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGG 724
G G + GGGR G G GGGG G GGWGG
Sbjct: 83 GGRGDWGGNGGGGRGGGGRGD-WGGNNNGGGGNWGGGGNNDGGWGG 127
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/77 (31%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXE--XXXQXXGKAG 658
GGG P G GGGG G GGWG R G G
Sbjct: 26 GGG--PGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGG 83
Query: 657 XRXXXGGGIGGPXGXXG 607
R GG GG G G
Sbjct: 84 GRGDWGGNGGGGRGGGG 100
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 804 GXGXXGXXRGGGGXXXXEGXGXGGWGG 724
G G G RGG G G G WGG
Sbjct: 133 GGGRGGGGRGGDGRGPPGSNGGGDWGG 159
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.1 bits (77), Expect = 0.082
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = +2
Query: 617 PXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXXPPPPL 781
P PP PPP P LP + PP PP P P PPPP+
Sbjct: 28 PPCPP-PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPM 81
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical protein
F07C4.7 protein.
Length = 180
Score = 34.3 bits (75), Expect = 0.14
Identities = 32/102 (31%), Positives = 33/102 (32%), Gaps = 2/102 (1%)
Frame = -3
Query: 1023 GGGKXXGXVLWXXVXGGVXGXRXXXAGXXR--ERGEAGFXXQRGKR*PXXAGKPXXGXXG 850
G G G W GG G G G GF G R G+ G G
Sbjct: 50 GRGGFGGNNGWNNGGGGFNGNGGFNGGGRGGGRGGNGGFGDNGGLRGGNGGGR---GGNG 106
Query: 849 XFVXXTGGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGG 724
F GGGR G G G GG G G GG GG
Sbjct: 107 GF-DDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGG 147
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.9 bits (74), Expect = 0.19
Identities = 40/140 (28%), Positives = 43/140 (30%), Gaps = 1/140 (0%)
Frame = -3
Query: 1023 GGGKXXGXVLWXXVXGGVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXF 844
GGG G + GG G G G G+ G P G G G
Sbjct: 101 GGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGG--PGGYGMGGYGGGGG- 157
Query: 843 VXXTGGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGK 664
GGG G G G GGGG G G GG+GG G
Sbjct: 158 ----GGGDFGGYGGGGMGGGGYGGGGDG---GYGGGGFGGGGMGGYGGGMGGGGYGGGGM 210
Query: 663 AGXRXXXGGGIG-GPXGXXG 607
G GG G GP G G
Sbjct: 211 GGGGYGGGGDGGYGPSGGYG 230
Score = 29.1 bits (62), Expect = 5.4
Identities = 36/118 (30%), Positives = 37/118 (31%), Gaps = 2/118 (1%)
Frame = -3
Query: 936 RERGEAG-FXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLGXGXXGXXRGGGGXX 760
R RG+ G F G G G G F G G G G G GGGG
Sbjct: 59 RTRGQRGPFAAMTGSYGRGGYGGSGGGAFGGFNGGYGQGGYG---GGGDFGGGMGGGGYG 115
Query: 759 XXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAG-XRXXXGGGIGGPXGXXGXTVMAG 589
G G GG GG G G GGG GG G G M G
Sbjct: 116 GG-GYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGG 172
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.25
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = +2
Query: 581 GGXPAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXX 760
GG P P GPP PPP P + ++ PP PP P P
Sbjct: 711 GGPPPPPGLPPITGGPP-PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP-PPPPPPGGC 768
Query: 761 XXPPPP 778
PPPP
Sbjct: 769 PPPPPP 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGL-SPLA 936
P P PP P++ PPPP PP P G P P PG+ +P+A
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP---PPGMFAPMA 797
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.25
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = +2
Query: 581 GGXPAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXX 760
GG P P GPP PPP P + ++ PP PP P P
Sbjct: 711 GGPPPPPGLPPITGGPP-PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP-PPPPPPGGC 768
Query: 761 XXPPPP 778
PPPP
Sbjct: 769 PPPPPP 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGL-SPLA 936
P P PP P++ PPPP PP P G P P PG+ +P+A
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP---PPGMFAPMA 797
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.25
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = +2
Query: 581 GGXPAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXX 760
GG P P GPP PPP P + ++ PP PP P P
Sbjct: 294 GGPPPPPGLPPITGGPP-PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP-PPPPPPGGC 351
Query: 761 XXPPPP 778
PPPP
Sbjct: 352 PPPPPP 357
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGL-SPLA 936
P P PP P++ PPPP PP P G P P PG+ +P+A
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP---PPGMFAPMA 380
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.33
Identities = 28/90 (31%), Positives = 30/90 (33%)
Frame = -3
Query: 876 GKPXXGXXGXFVXXTGGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQ 697
G+P G G GGG G G GGGG G G G GG+
Sbjct: 44 GRPGWGGGGPG-WGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGG------ 96
Query: 696 XXEXXXQXXGKAGXRXXXGGGIGGPXGXXG 607
G G R GGG GG G G
Sbjct: 97 GGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
Score = 31.9 bits (69), Expect = 0.76
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -3
Query: 804 GXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGG 625
G G G GGGG G G GWGG + G G GG GG
Sbjct: 42 GWGRPGW--GGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGG 99
Query: 624 PXGXXG 607
G G
Sbjct: 100 GGGGRG 105
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -3
Query: 876 GKPXXGXXGXFVXXTGGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWG 727
G G G GGG + G G G GGGG G G GG G
Sbjct: 83 GNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.33
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSP 903
P P PP PLA + PPPP PP + GSP P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.33
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSP 903
P P PP PLA + PPPP PP + GSP P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.33
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSP 903
P P PP PLA + PPPP PP + GSP P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 32.7 bits (71), Expect = 0.44
Identities = 26/85 (30%), Positives = 31/85 (36%)
Frame = -3
Query: 975 GVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXFVXXTGGGRVPQVLGXG 796
G G + G + G GF Q G G G G F + GG Q G G
Sbjct: 58 GGFGGQSGFGGGSSQGGFGGFGQQGGFGGNSQGG--FGGQQGGFSGNSPGGFEGQQGGFG 115
Query: 795 XXGXXRGGGGXXXXEGXGXGGWGGK 721
G G GG G GG+GG+
Sbjct: 116 GFGQQVGFGGQGGFGGNSQGGFGGQ 140
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +1
Query: 772 PXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTG 870
P PP P PL QNL PPP PP P G
Sbjct: 559 PIPPPPPPPLPQNLSGAPPP----PPPPPPMLG 587
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 713 LAXLPPHPPXPXPSXXXXPPPP 778
L+ PP PP P P PPPP
Sbjct: 572 LSGAPPPPPPPPPMLGGPPPPP 593
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 32.3 bits (70), Expect = 0.58
Identities = 21/70 (30%), Positives = 24/70 (34%)
Frame = +2
Query: 581 GGXPAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXX 760
GG P P P P+P P P C + PP PP P P
Sbjct: 28 GGCPTPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQ----FCPPPPICPPPPPPPMPCPP 83
Query: 761 XXPPPPLXXP 790
PPPP+ P
Sbjct: 84 --PPPPMPRP 91
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXP 861
P P P P+ + PPPPC PP P
Sbjct: 37 PRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPP 69
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 32.3 bits (70), Expect = 0.58
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = -3
Query: 804 GXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGG 625
G G G GGGG G GG GG + G G GGG G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGN 112
Query: 624 PXGXXG 607
G G
Sbjct: 113 QGGGGG 118
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3
Query: 804 GXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQ 676
G G G RGG G EG GG+GG R + Q E Q
Sbjct: 114 GRGAGGFRRGGEGGRFNEGERRGGFGGGGHRGGYRQRRESEEQ 156
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.76
Identities = 31/107 (28%), Positives = 34/107 (31%), Gaps = 12/107 (11%)
Frame = -3
Query: 861 GXXGXFVXXTGGGRVP---QVLGXGXXGXXRGGGGXXXXEGXGXGGW--GGKXARXLHHQ 697
G G V +GGG G G GGGG G G GG+ GG
Sbjct: 198 GGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSG 257
Query: 696 XXEXXXQXXGKAGXRXXXGGGIGGPXGXX-------GXTVMAGXPPP 577
G G GGG GG G G + A PPP
Sbjct: 258 GSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPP 304
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.76
Identities = 31/107 (28%), Positives = 34/107 (31%), Gaps = 12/107 (11%)
Frame = -3
Query: 861 GXXGXFVXXTGGGRVP---QVLGXGXXGXXRGGGGXXXXEGXGXGGW--GGKXARXLHHQ 697
G G V +GGG G G GGGG G G GG+ GG
Sbjct: 198 GGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSG 257
Query: 696 XXEXXXQXXGKAGXRXXXGGGIGGPXGXX-------GXTVMAGXPPP 577
G G GGG GG G G + A PPP
Sbjct: 258 GSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPP 304
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/73 (34%), Positives = 25/73 (34%)
Frame = -3
Query: 825 GRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXX 646
G P G G GGGG G G GG GG R G G R
Sbjct: 206 GHYPSQRGGSGGGGG-GGGGGGYGSGGGWGGGGGGRDR--------DRGGWGGGGGGRGY 256
Query: 645 XGGGIGGPXGXXG 607
GGG GG G G
Sbjct: 257 GGGGGGGGYGYGG 269
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.3
Identities = 38/136 (27%), Positives = 38/136 (27%)
Frame = -3
Query: 1023 GGGKXXGXVLWXXVXGGVXGXRXXXAGXXRERGEAGFXXQRGKR*PXXAGKPXXGXXGXF 844
GGG G GG G G G G G A P G
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Query: 843 VXXTGGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGK 664
GGG G G G GGGG G G GG GG G
Sbjct: 122 CGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCG------GGGGGCGGGGG 175
Query: 663 AGXRXXXGGGIGGPXG 616
G GGG GG G
Sbjct: 176 GGCGGGGGGGCGGGCG 191
Score = 30.7 bits (66), Expect = 1.8
Identities = 28/85 (32%), Positives = 28/85 (32%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXR 652
GGG P G GGGG G G GG GG G G
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG----------------CGGGGGGC 92
Query: 651 XXXGGGIGGPXGXXGXTVMAGXPPP 577
GGG GG G G A PPP
Sbjct: 93 GGGGGGCGGGGGCGGG--CAPPPPP 115
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/82 (30%), Positives = 26/82 (31%), Gaps = 1/82 (1%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXR 652
GGG G G G GGGG G GG GG G G R
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQR 117
Query: 651 -XXXGGGIGGPXGXXGXTVMAG 589
GGG G G G + G
Sbjct: 118 QGGGGGGFGDILGGIGSLIGGG 139
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = -3
Query: 804 GXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGG 625
G G G GGGG G GG GG+ + G G GGG GG
Sbjct: 207 GGGGGGDRYGGGGGDRYGGDRYGGGGGRRG----SPDRRGGFRSGGGGGGYMRSGGGGGG 262
Query: 624 P 622
P
Sbjct: 263 P 263
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXK------XPPXPXTGFSRXXGSPFSPLGXKPGL 924
P P PP S PL PPPP PP P G + + P PG+
Sbjct: 470 PPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIA-PMSTNAPPPPPMPGM 528
Query: 925 SPLA 936
+PL+
Sbjct: 529 APLS 532
>AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical
protein K12C11.7 protein.
Length = 166
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 482 FGITRITRALRRQIRFDCCDSNPHG 408
FG R+TR ++ ++ DCC S P G
Sbjct: 50 FGRQRMTRTVKEKLAVDCCCSTPEG 74
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/69 (33%), Positives = 24/69 (34%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXR 652
GGG P G G G GGGG G GG GG + AG
Sbjct: 323 GGGDFPA--GGGGGGYSTGGGGGRADSGGAAGGAGGAGG----YSGGGGGGGGGAAAGGG 376
Query: 651 XXXGGGIGG 625
GGG GG
Sbjct: 377 YNAGGGGGG 385
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.3 bits (65), Expect = 2.3
Identities = 23/71 (32%), Positives = 26/71 (36%)
Frame = +2
Query: 578 GGGXPAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSX 757
G P+ + P P P PPP PA P C S P PP P P+
Sbjct: 72 GAPRPSPSCCPYVPPAPLPPPPP----PASP--CCGPSP-------VPAPCCPPPPAPAA 118
Query: 758 XXXPPPPLXXP 790
PPPP P
Sbjct: 119 PCCPPPPPPTP 129
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +1
Query: 778 PPXSPXPLAQNLXHP-PPPCXXXKXP-PXPXTGFSRXXGSPFSPLG 909
PP P P Q P PPPC + P P P R G SP G
Sbjct: 103 PPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCLPSPRG 148
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +1
Query: 778 PPXSPXPLAQNLXHP-PPPCXXXKXP-PXPXTGFSRXXGSPFSPLG 909
PP P P Q P PPPC + P P P R G SP G
Sbjct: 103 PPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCLPSPRG 148
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +1
Query: 778 PPXSPXPLAQNLXHP-PPPCXXXKXP-PXPXTGFSRXXGSPFSPLG 909
PP P P Q P PPPC + P P P R G SP G
Sbjct: 103 PPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCLPSPRG 148
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPG 921
P P PP S P+ + PP P + PP P +G P P G PG
Sbjct: 261 PPVPPPPPSVTPMPPPM--PPTPGMTPRPPPPPSSGM--WPPPPPPPPGRTPG 309
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +1
Query: 772 PXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSP 930
P PP P P PPPP PP P R G P P G P P
Sbjct: 272 PMPPPMP-PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP-GMPPPPPP 322
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 966 PXPPXPPXXTTPXXPXFPPLP 1028
P PP PP TP P P +P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMP 317
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPG 921
P P PP S P+ + PP P + PP P +G P P G PG
Sbjct: 271 PPVPPPPPSVTPMPPPM--PPTPGMTPRPPPPPSSGM--WPPPPPPPPGRTPG 319
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +1
Query: 772 PXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSP 930
P PP P P PPPP PP P R G P P G P P
Sbjct: 282 PMPPPMP-PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP-GMPPPPPP 332
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 966 PXPPXPPXXTTPXXPXFPPLP 1028
P PP PP TP P P +P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMP 327
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +2
Query: 590 PAXTVXPXXPXGPPIP-PPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXX 766
P T P PP P P + P++ S PP PP PS
Sbjct: 113 PPPTASSAPPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPT 172
Query: 767 PPPP 778
PPPP
Sbjct: 173 PPPP 176
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +2
Query: 590 PAXTVXPXXPXGPPIP-PPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPPXPXPSXXXX 766
P T P PP P P + P++ S PP PP PS
Sbjct: 113 PPPTASSAPPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPT 172
Query: 767 PPPP 778
PPPP
Sbjct: 173 PPPP 176
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGG 724
GGGR + G G G RGG G G GG GG
Sbjct: 305 GGGRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGG 340
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 804 GXGXXGXXRGGGGXXXXEGXGXGGWGG 724
G G G RGGGG G GG+ G
Sbjct: 90 GRGGFGGSRGGGGYDGGRGGSRGGYDG 116
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 707 SXLAXLPPHPPXPXPSXXXXPPPP 778
S L PP PP P P PPPP
Sbjct: 78 SILQQAPPPPPPPPPPTLKAPPPP 101
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPL 781
PP PP P P+ PPPP+
Sbjct: 85 PPPPPPPPPTLKAPPPPPI 103
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Frame = +1
Query: 772 PXPPXSPXPLAQNLXH-----PPPPCXXXKXPPXP 861
P PP P PL L PPPP K PP P
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = +1
Query: 763 PXXPXPPXSPXPLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSP 930
P P PP P P + +L PPP PP P T G P P SP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPP------PPPPPTMSKAPTGVPLPVPPPPPLFSP 1385
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +2
Query: 617 PXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAX-LPPHPPXPXPSXXXXPPPP 778
P PP PPP P P + + + +PP PP PS PPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGG 724
GGG +G G G GGGG G G GG GG
Sbjct: 81 GGGHGGAAVGGGYGGAVGGGGGGGYGGGHG-GGHGG 115
>AF067209-1|AAC16982.2| 553|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 9 protein.
Length = 553
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 921 PLPSRXXNXRPXFSXPXPPXPPXXTTPXXPXFPPLP 1028
P P F P PP PP P P PLP
Sbjct: 361 PFPQFGLPQPNLFQFPAPPAPPPFGVPQAPQLAPLP 396
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +1
Query: 763 PXXPXPPXSPX--PLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSP 930
P P P P P NL PPPP P P G P+G P P
Sbjct: 686 PGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPP 743
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 25.0 bits (52), Expect(2) = 5.0
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 590 PAXTVXPXXPXGPPIPPPXXXRXPALP 670
P+ P P GPP PP R P P
Sbjct: 234 PSDEPSPSDPPGPPGPPGPPTRRPPGP 260
Score = 22.6 bits (46), Expect(2) = 5.0
Identities = 10/23 (43%), Positives = 10/23 (43%), Gaps = 1/23 (4%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPP-PPLXXP 790
PP PP P PP PP P
Sbjct: 257 PPGPPGPPTRRPPGPPGPPTRRP 279
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 707 SXLAXLPPHPPXPXPSXXXXPPPPLXXP 790
S L PP PP P P P PP+ P
Sbjct: 633 SPLNPQPPPPPSPSPEPEPEPKPPVTPP 660
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 951 PXFSXPXPPXPPXXTTPXXPXFPPLP 1028
P P PP PP P P +PP P
Sbjct: 127 PYQQQPPPPPPPPHYPPPPPHYPPPP 152
Score = 28.7 bits (61), Expect = 7.1
Identities = 25/97 (25%), Positives = 29/97 (29%), Gaps = 2/97 (2%)
Frame = +2
Query: 506 AQLPXVAVLKPQXKTXHXPHSLFQGGGXPAXTVXPXXPXGPPIPPPXXXRXPALPFXCXX 685
A P AV P P P + P P PPP A+P
Sbjct: 55 APYPQQAVPAPAPPPAPYPQHAVPAPAPPLASY-PQNAVPVPAPPPAPYPQHAVPAPAPP 113
Query: 686 XSXX*WWSXLAXLP--PHPPXPXPSXXXXPPPPLXXP 790
+ + A P PP P P PPPP P
Sbjct: 114 PAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPP 150
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/74 (28%), Positives = 24/74 (32%)
Frame = +2
Query: 560 PHSLFQGGGXPAXTVXPXXPXGPPIPPPXXXRXPALPFXCXXXSXX*WWSXLAXLPPHPP 739
P GG P P P PP P R P P + + P +PP
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPR---TPPSPEPRNPP 184
Query: 740 XPXPSXXXXPPPPL 781
PS PPP L
Sbjct: 185 RTPPSPIPPPPPRL 198
>U41033-6|AAA82378.1| 859|Caenorhabditis elegans Hypothetical protein
K09E3.7 protein.
Length = 859
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 896 FPLWXXNPASPLS-RXQPAXXLLXP-XTP-PSTXXHNTXPXXFPPP 1024
FP+W +P PLS QP ++ P TP PS +T P P
Sbjct: 769 FPVWNQHPTMPLSFTPQPVPSMIPPVITPNPSMISRSTMPLIMSYP 814
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +1
Query: 763 PXXPXPPXSPX--PLAQNLXHPPPPCXXXKXPPXPXTGFSRXXGSPFSPLGXKPGLSP 930
P P P P PLA + + PPPC PP P G + +P G P P
Sbjct: 65 PACPPPCFGPACVPLAPIIVNGPPPCFGPACPP-PCFGPACAPPAPIIVNGPPPCFGP 121
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 25.0 bits (52), Expect(2) = 5.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 590 PAXTVXPXXPXGPPIPPP 643
P+ P P GPP PPP
Sbjct: 1000 PSAPKAPAGPGGPPPPPP 1017
Score = 22.2 bits (45), Expect(2) = 5.7
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPL 781
PP PP P PPP+
Sbjct: 1014 PPPPPPPADFFANIAPPPV 1032
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 25.0 bits (52), Expect(2) = 6.2
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 590 PAXTVXPXXPXGPPIPPP 643
P+ P P GPP PPP
Sbjct: 239 PSAPKAPAGPGGPPPPPP 256
Score = 22.2 bits (45), Expect(2) = 6.2
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +2
Query: 725 PPHPPXPXPSXXXXPPPPL 781
PP PP P PPP+
Sbjct: 253 PPPPPPPADFFANIAPPPV 271
>L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family
protein 1, isoform c protein.
Length = 113
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 828 GGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGG 724
GG G G G GGGG G G GG+GG
Sbjct: 44 GGLASNFFGGGGGGGGGGGGGGF---GGGNGGFGG 75
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 828 GGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGG 724
GG G G G GGGG G G GG+GG
Sbjct: 44 GGLASNFFGGGGGGGGGGGGGGF---GGGNGGFGG 75
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGG 724
GGGR G G G GGGG G G GG+GG
Sbjct: 832 GGGRGGDFGGSGNFGGS-GGGGSFGGSG-GGGGFGG 865
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/75 (28%), Positives = 21/75 (28%), Gaps = 3/75 (4%)
Frame = -3
Query: 804 GXGXXGXXRGGG---GXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGG 634
G G G GG G G GGWGG HH G G G G
Sbjct: 25 GGGDHGGHDHGGHDHGGHDHGGHDHGGWGGHDHHDHHHGGWGGHDHDHGNGGGGGDNGWG 84
Query: 633 IGGPXGXXGXTVMAG 589
G G G
Sbjct: 85 YRPFTGFGGRNYYGG 99
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGK 721
GGG Q G G GGGG G G GG G+
Sbjct: 311 GGGAGAQSAYFGVGGGPVGGGGGGAKSGGGGGGIPGQ 347
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 831 GGGRVPQVLGXGXXGXXRGGGGXXXXEGXGXGGWGGK 721
GGG Q G G GGGG G G GG G+
Sbjct: 205 GGGAGAQSAYFGVGGGPVGGGGGGAKSGGGGGGIPGQ 241
>AF039048-2|AAB94238.1| 85|Caenorhabditis elegans Hypothetical
protein F16B4.7 protein.
Length = 85
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = -3
Query: 804 GXGXXGXXRGGGGXXXXEGXGXGGWGGKXARXLHHQXXEXXXQXXGKAGXRXXXGGGIGG 625
G G GGGG G G WG + + Q G + GGG GG
Sbjct: 23 GRPSYGGGYGGGGGDFGGGGSGGQWGSQSS---------SFQQSQSSGGFQNNAGGGFGG 73
Query: 624 PXGXXG 607
G G
Sbjct: 74 GMGPGG 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,272,214
Number of Sequences: 27780
Number of extensions: 399411
Number of successful extensions: 3007
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2521
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2720181880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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