Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O05
(967 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0717 + 27097367-27097621,27097744-27097866,27098136-270983... 32 0.60
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 32 0.79
02_04_0628 + 24589313-24589472,24589604-24589765,24589850-245899... 30 2.4
01_01_0166 + 1412918-1413309,1413845-1414006,1414534-1414720,141... 30 3.2
01_06_0513 - 29944888-29945943 29 4.2
06_01_0486 - 3455030-3455770 29 5.5
12_02_1174 - 26696869-26698191 29 7.3
09_04_0626 - 19057771-19058031,19058850-19058956,19059885-19059960 29 7.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 7.3
03_01_0515 - 3864796-3865425 29 7.3
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 7.3
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 7.3
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 28 9.7
05_03_0164 - 9078814-9079908 28 9.7
>03_05_0717 +
27097367-27097621,27097744-27097866,27098136-27098303,
27098393-27100072
Length = 741
Score = 32.3 bits (70), Expect = 0.60
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 102 LLFFIATVLVCVNAE-VYRSPDYEEEYPIRGLFSXRHPRDVTWDTKMGGGKVF 257
++ I VL CV +Y EE YPI+G +S +T+D ++ K+F
Sbjct: 461 VVMLILVVLTCVGTHYIYGGNGAEEPYPIKGKYSQFTLLTMTYDARLWNLKMF 513
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.9 bits (69), Expect = 0.79
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +3
Query: 828 SSXHPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXP 950
+S PP +PPPS P PPP P P P
Sbjct: 102 NSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPP 142
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +3
Query: 840 PPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXP 950
PPY + PPP P PP P P P
Sbjct: 97 PPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPP 133
>02_04_0628 +
24589313-24589472,24589604-24589765,24589850-24589983,
24590108-24590275,24590481-24590562,24590734-24591512
Length = 494
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -2
Query: 576 RLVFCDXIPX--RPYRRLRCGCSYQDPTHRSPR 484
R++ CD P R RL C CSYQ +SPR
Sbjct: 29 RILLCDSDPSSSREVLRLLCNCSYQVTCAKSPR 61
>01_01_0166 +
1412918-1413309,1413845-1414006,1414534-1414720,
1415221-1415646,1416028-1416036,1416361-1416768,
1417397-1417654
Length = 613
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 579 RRLVFCDXIPXRPYRRLRCGCSYQDPTHRSPRLSFQICLR 460
+R++ CD P RP+R + CG + + P F+ +R
Sbjct: 146 KRVLSCDFKPTRPFRIVTCGEDFLANYYEGPPFKFKHSIR 185
>01_06_0513 - 29944888-29945943
Length = 351
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 139 TQKYT-GLLITKKNTPSEAYFQXDTPVTSRGTRKWEEGRSSALWD 270
T +Y G + P+ A P +RGT +W EG + AL D
Sbjct: 65 TDRYAQGFEFAPRPAPATATATAPAPTPARGTPEWSEGSTFALLD 109
>06_01_0486 - 3455030-3455770
Length = 246
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 831 SXHPPYXADXXXNPPPSXPXXXXPPP 908
S HPPY PPP+ P PPP
Sbjct: 74 SCHPPY-TPPTPRPPPTPPYVPSPPP 98
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +3
Query: 822 TXSSXHPPYXADXXX-NPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
T + PP+ PPPS P PPP P S P P
Sbjct: 131 TRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQP 177
>09_04_0626 - 19057771-19058031,19058850-19058956,19059885-19059960
Length = 147
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 441 WRLVRSCWPSPDVHRS*CCHLRVLRPWCRKPGRLVDRG 328
WR + S P D R+ C LR W R P ++ G
Sbjct: 64 WRHIHSLMPLRDAARAACISQAFLRSWRRYPNLILTAG 101
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 873 PPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
PPS P PPP SP P P P
Sbjct: 1161 PPSPPPATPPPPPPLSPSLPPPPPPPPLP 1189
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 840 PPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
PP + PP P PPP SP P P P
Sbjct: 72 PPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSP 111
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 831 SXHPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
S PP +D PPP P PPP SP P P
Sbjct: 417 SPPPPLPSDAFEQPPP--PPEHPPPPESTSPPPPPTSDPPPVP 457
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSP 923
HPP+ D +PPP P PPP P
Sbjct: 134 HPPHPPD---HPPPPPPCRVPPPPGYRQP 159
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 28.3 bits (60), Expect = 9.7
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Frame = +3
Query: 300 GYNREIFNDDRGQLTGQAYGTRVLGPGGDSTNYGGRLDW--ANKNAQAAIDINRQIG--- 464
G E+ D R +L G+ + G G+ GG A +A + + +
Sbjct: 1073 GNELELAGDHREELGGRGDELELAGDHGEELGGGGTSSSSPATTGRRAMEETSSSLPAAL 1132
Query: 465 GRSGMTASGSGVWD---LDKNTHISAGGMVSKE-XGHRRPDVGL 584
G G T SG G WD L+ + GG + G RR +GL
Sbjct: 1133 GTGGGTESGGGAWDELELELADGVRRGGKERRRAAGRRRRALGL 1176
>05_03_0164 - 9078814-9079908
Length = 364
Score = 28.3 bits (60), Expect = 9.7
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 366 VLGPGGDSTNYGGRLDWANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGGMV 545
V+G G +++ LD+ + A A + NR+ G ++ G + L N H S G
Sbjct: 85 VVGDAGATSDGLLLLDFTDIRATARVVANRRAGAQAQAQQQGKKLTGLSFNLHNSRGDTQ 144
Query: 546 SKEXG--HRRPDVGLQATDP 599
+E + PD+ +P
Sbjct: 145 ERELAGVNTNPDITRLVCNP 164
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,241,851
Number of Sequences: 37544
Number of extensions: 555761
Number of successful extensions: 2188
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2028
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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