BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O05
(967 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 32 3.6
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 32 3.6
AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens ... 32 3.6
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 32 3.6
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 32 3.6
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 32 3.6
AF376802-1|AAM46111.1| 835|Homo sapiens neuroligin 2 protein. 31 8.3
AB037787-1|BAA92604.1| 550|Homo sapiens KIAA1366 protein protein. 31 8.3
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.9 bits (69), Expect = 3.6
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
HP + A PPP+ PPP P + P P P
Sbjct: 358 HPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP 398
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.9 bits (69), Expect = 3.6
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
HP + A PPP+ PPP P + P P P
Sbjct: 358 HPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP 398
>AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens
cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
Length = 169
Score = 31.9 bits (69), Expect = 3.6
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
HP + A PPP+ PPP P + P P P
Sbjct: 30 HPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP 70
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 31.9 bits (69), Expect = 3.6
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
HP + A PPP+ PPP P + P P P
Sbjct: 486 HPDFAAPPPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPP 526
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 31.9 bits (69), Expect = 3.6
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
HP + A PPP+ PPP P + P P P
Sbjct: 357 HPDFAAPPPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPP 397
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 31.9 bits (69), Expect = 3.6
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
HP + A PPP+ PPP P + P P P
Sbjct: 358 HPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP 398
>AF376802-1|AAM46111.1| 835|Homo sapiens neuroligin 2 protein.
Length = 835
Score = 30.7 bits (66), Expect = 8.3
Identities = 14/53 (26%), Positives = 19/53 (35%)
Frame = +3
Query: 792 NLXXFNLXMXTXSSXHPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXP 950
+L + + T ++ PPY PP P PPP P P P
Sbjct: 607 HLHNLHTELFTTTTRLPPYATRWPPRPPAGAPGTRRPPPPATLPPEPEPEPGP 659
>AB037787-1|BAA92604.1| 550|Homo sapiens KIAA1366 protein protein.
Length = 550
Score = 30.7 bits (66), Expect = 8.3
Identities = 14/53 (26%), Positives = 19/53 (35%)
Frame = +3
Query: 792 NLXXFNLXMXTXSSXHPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXP 950
+L + + T ++ PPY PP P PPP P P P
Sbjct: 322 HLHNLHTELFTTTTRLPPYATRWPPRPPAGAPGTRRPPPPATLPPEPEPEPGP 374
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,063,009
Number of Sequences: 237096
Number of extensions: 2880027
Number of successful extensions: 7882
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7457
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12825217482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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