SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O05
         (967 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    32   3.6  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    32   3.6  
AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens ...    32   3.6  
AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    32   3.6  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                32   3.6  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    32   3.6  
AF376802-1|AAM46111.1|  835|Homo sapiens neuroligin 2 protein.         31   8.3  
AB037787-1|BAA92604.1|  550|Homo sapiens KIAA1366 protein protein.     31   8.3  

>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = +3

Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
           HP + A     PPP+      PPP    P   +  P P  P
Sbjct: 358 HPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP 398


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = +3

Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
           HP + A     PPP+      PPP    P   +  P P  P
Sbjct: 358 HPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP 398


>AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
           WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
          Length = 169

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = +3

Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
           HP + A     PPP+      PPP    P   +  P P  P
Sbjct: 30  HPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP 70


>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = +3

Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
           HP + A     PPP+      PPP    P   +  P P  P
Sbjct: 486 HPDFAAPPPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPP 526


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = +3

Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
           HP + A     PPP+      PPP    P   +  P P  P
Sbjct: 357 HPDFAAPPPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPP 397


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = +3

Query: 837 HPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXPXXP 959
           HP + A     PPP+      PPP    P   +  P P  P
Sbjct: 358 HPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP 398


>AF376802-1|AAM46111.1|  835|Homo sapiens neuroligin 2 protein.
          Length = 835

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 14/53 (26%), Positives = 19/53 (35%)
 Frame = +3

Query: 792 NLXXFNLXMXTXSSXHPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXP 950
           +L   +  + T ++  PPY       PP   P    PPP    P      P P
Sbjct: 607 HLHNLHTELFTTTTRLPPYATRWPPRPPAGAPGTRRPPPPATLPPEPEPEPGP 659


>AB037787-1|BAA92604.1|  550|Homo sapiens KIAA1366 protein protein.
          Length = 550

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 14/53 (26%), Positives = 19/53 (35%)
 Frame = +3

Query: 792 NLXXFNLXMXTXSSXHPPYXADXXXNPPPSXPXXXXPPPXXXSPXXXSXXPXP 950
           +L   +  + T ++  PPY       PP   P    PPP    P      P P
Sbjct: 322 HLHNLHTELFTTTTRLPPYATRWPPRPPAGAPGTRRPPPPATLPPEPEPEPGP 374


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,063,009
Number of Sequences: 237096
Number of extensions: 2880027
Number of successful extensions: 7882
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7457
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12825217482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -