Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O03
         (990 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0239 - 23543592-23544293,23544482-23544634,23544737-235449...    31   1.1  
11_06_0344 + 22540436-22540737,22541304-22543545                       31   1.4  
03_06_0537 + 34585339-34585581,34585668-34585862,34585964-34586845     30   2.5  
05_01_0185 + 1305006-1305218                                           29   7.6  
05_01_0181 - 1280296-1280508                                           29   7.6  
03_02_0520 + 9092020-9092079,9092253-9093047                           29   7.6  

>05_05_0239 -
           23543592-23544293,23544482-23544634,23544737-23544922,
           23544951-23545097,23545274-23545411,23545527-23545727
          Length = 508

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 20/88 (22%), Positives = 40/88 (45%)
 Frame = +2

Query: 413 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDRMVCTNFNETWQSDCEVYRQRCLCLDNSD 592
           ++ + +S   ++TE+P + ASR V +       +     +T ++D    R+RC  L+  +
Sbjct: 202 SSPEAMSPTMSDTESPQIKASRDVASAMAAKVKLLQRELKTVKADMAFSRERCAQLEEEN 261

Query: 593 QCRGPQYHHVQSSITERAEKCLTALKAR 676
           +      H     +  +  + L A KAR
Sbjct: 262 RMLRDGKHDADEDLIRQQLETLLAEKAR 289


>11_06_0344 + 22540436-22540737,22541304-22543545
          Length = 847

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 614 HHVQSSITERAEKCLTALKARCLTSPS 694
           H +QS   ERAE+C + L  RC+  P+
Sbjct: 298 HTLQSGFEERAEECFSQLVQRCIIRPA 324


>03_06_0537 + 34585339-34585581,34585668-34585862,34585964-34586845
          Length = 439

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -1

Query: 363 FIRDLVEKVVNSGY--FCLMVSLLVQALRHSVLDVFSLRDVPAAELLRRWTFSSRGADPA 190
           F+ D    +  SG+  + LM+     ALR +V   F         L R W FS  G  P 
Sbjct: 9   FVVDCGRTIFFSGFNAYWLMMMAADPALRGAVATAFQQASAHGLNLARTWAFSDGGDQPL 68

Query: 189 VPTP 178
             +P
Sbjct: 69  QSSP 72


>05_01_0185 + 1305006-1305218
          Length = 70

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 204 GADPAVPTPHTTSVGGANDRDQRGPTQEDPSSCLSM 97
           GADP V +PH    GG    D RG +     SC  +
Sbjct: 3   GADPTVSSPHARGFGGGG--DGRGGSDSLSPSCADL 36


>05_01_0181 - 1280296-1280508
          Length = 70

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 204 GADPAVPTPHTTSVGGANDRDQRGPTQEDPSSCLSM 97
           GADP V +PH    GG    D RG +     SC  +
Sbjct: 3   GADPTVSSPHARGFGGGG--DGRGGSDSLSPSCADL 36


>03_02_0520 + 9092020-9092079,9092253-9093047
          Length = 284

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 276 VLDVFSLRDVPAAELLRRWTFSSR 205
           VLD+ +++ +PA  +L+RWT  +R
Sbjct: 138 VLDLMNIKSLPAQYILKRWTREAR 161


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,583,112
Number of Sequences: 37544
Number of extensions: 467887
Number of successful extensions: 1349
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2893540780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)