Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_O03
(990 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.089
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 32 0.63
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 32 0.63
SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.83
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 31 1.4
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 1.4
SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09) 31 1.9
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 2.5
SB_13474| Best HMM Match : Keratin_B2 (HMM E-Value=2.6) 29 5.8
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.7
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 35.1 bits (77), Expect = 0.089
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP 486
PC V C AG+ C + G A C C+ +CP
Sbjct: 58 PCSNVFCHAGQEC-VAAKGKASCECLSECP 86
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 33.1 bits (72), Expect = 0.36
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 397 PCLKVHCSAG-RVCEINEHGDAMCNCIKDCPYE 492
PC CSA CE+ ++ +A+C C KDCP E
Sbjct: 1766 PCQNFICSAPYSSCEVKDN-EAVCECPKDCPKE 1797
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 32.3 bits (70), Expect = 0.63
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETD 498
PCL V C CE DA C C + CP D
Sbjct: 302 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD 335
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 32.3 bits (70), Expect = 0.63
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETD 498
PCL V C CE DA C C + CP D
Sbjct: 79 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD 112
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 32.3 bits (70), Expect = 0.63
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETD 498
PCL V C CE DA C C + CP D
Sbjct: 36 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD 69
>SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 31.9 bits (69), Expect = 0.83
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 335 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTAS-RTVPTRQTPDRM 511
TT T+S + +T+ T +T + + +T ET T + T T +TPD
Sbjct: 365 TTPETQSTTETPETQSPTQTPETQLTTETPETQSTTTTPETQSTTGTPETQSTTETPDTQ 424
Query: 512 VCTNFNETWQ 541
T FN+T++
Sbjct: 425 STTLFNDTFR 434
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSR 504
PC + C+ C+ DA C C + CP D R
Sbjct: 151 PCENMQCTHYATCKAYGPKDARCECAESCPTYDDER 186
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETD 498
PCL V C CE DA C C CP D
Sbjct: 191 PCLNVTCEYFAECEAFAADDAQCVCPSKCPAYID 224
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPY 489
PCLK+ C C + G A C C DC +
Sbjct: 228 PCLKISCKFHSRCVKSSGGSANCVCPSDCSH 258
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYE 492
PC V C C G A+C C +CP E
Sbjct: 779 PCKNVECKFKARCVGLPDGSAVCECNTECPSE 810
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDC 483
PC ++ CS C + +G A C C + C
Sbjct: 709 PCSRISCSHYGRCVVRNNGKAHCVCPRQC 737
>SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09)
Length = 217
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP--YETDSRPHGV 516
PC K C G +C + G C C CP YE +G+
Sbjct: 13 PCSKRVCMWGEMCRADSSGFTYCECPVSCPNTYEPVCSVYGI 54
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYE------TDSRPHGVHKLQRNLAIGLRSI 558
PC V C C++ + G C C C YE TD + +G +K + + L+S
Sbjct: 1271 PCDNVSCDYYAQCQVEDDGSTSCKCPIFCTYEYMPVCGTDGKTYG-NKCEMRASACLKST 1329
Query: 559 PPAMLMP 579
+ P
Sbjct: 1330 MVTVAYP 1336
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 397 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETD 498
PC C G CEI E G +C C C D
Sbjct: 1798 PCKSATCQFGGRCEIQEDGTEVCICPTYCRLNYD 1831
>SB_13474| Best HMM Match : Keratin_B2 (HMM E-Value=2.6)
Length = 232
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 545 DCEVYRQRCLCLDNSDQCRGPQYHHVQSSITERAEKCLTALKAR 676
+C+V R C D CR PQ H I+ R T LK R
Sbjct: 163 NCQVDRDSFPCGCTRDACRNPQGRHEYDPISVRRHFIDTVLKLR 206
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 28.7 bits (61), Expect = 7.7
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Frame = +2
Query: 368 MKTKK-STWKTLA*KS-TAAQDVSAKSTNTET--PCVTASRTVPTRQTPDRMVCTNFNET 535
+KTK +T K L ++ T A T ++T P V A +P T F ET
Sbjct: 287 IKTKDVTTTKVLPPQTCTVTTTKLATCTPSQTCYPNVPACVLIPATTPCVATTTTCFKET 346
Query: 536 WQSDCEVYRQRCLCLDNSDQCRGPQYHHVQSSITERAEK 652
+ E R C + + + R P Y HV R K
Sbjct: 347 SVTKTEFIRPTVTCTETTTKIRPPSYDHVHVEKRSRTIK 385
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,822,476
Number of Sequences: 59808
Number of extensions: 510036
Number of successful extensions: 1588
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2943548647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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