Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O03
         (990 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              33   0.004
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   7.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   9.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 33.1 bits (72), Expect = 0.004
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 397 PCLKVHCSAGRVCEINEHGD-AMCNCIKDCP 486
           PC   +C  G+ CE++ +   A+C C++ CP
Sbjct: 81  PCASKYCGIGKECELSPNSTIAVCVCMRKCP 111



 Score = 24.2 bits (50), Expect = 1.8
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +2

Query: 440 STNTETPCVTASRTVPTRQTPDRMVCTNFNETWQSDCEVYRQRC 571
           S N+        R  P R  P   VC +  + + + CE++R  C
Sbjct: 96  SPNSTIAVCVCMRKCPRRHRP---VCASNGKIYANHCELHRAAC 136


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = -2

Query: 788 GHAXKGXQXGVLVXRRGV*SAVAHELKASPHAXGXSDISLSVQSG 654
           GHA  G             +  +  L ASP   G SD+  S  SG
Sbjct: 216 GHAQMGRPSYTTATMATTSTPGSGSLPASPADSGVSDVESSTSSG 260


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = +2

Query: 461 CVTASRTVPTRQTPDRMVCTNFNETWQSDCEVYRQRCLCLDNSDQCRGPQYHHVQSSITE 640
           CV ASR      T    V    N   +    +  +R  C+ NS  C  P      SS ++
Sbjct: 223 CVIASRHRNLEATESENVRPRRNVLIERAKSIRARRTECVTNSVTCDRPSDEAEPSSTSK 282

Query: 641 RA 646
           ++
Sbjct: 283 KS 284


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,697
Number of Sequences: 438
Number of extensions: 3834
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32774469
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)