Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_O02
         (955 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.36 
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           27   0.63 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.9  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   5.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.36
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 870 PPPPPXXPPXXXXPPXXKXGXPXXG 944
           PPP P  PP    PP    G P  G
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGG 605



 Score = 25.0 bits (52), Expect = 3.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 861 PXXPPPPPXXPP 896
           P  PPPPP  PP
Sbjct: 583 PAPPPPPPMGPP 594



 Score = 23.8 bits (49), Expect = 7.8
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
 Frame = +2

Query: 815 PXHP--LKXAXXSPAXPPXXXPPPPXXPPXKXXPP 913
           P +P  L+     P  P    PP P  PP    PP
Sbjct: 561 PLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPP 595


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 27.5 bits (58), Expect = 0.63
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +2

Query: 605 AGRGGLRIGRSSASSLTDSLPRSSXXGXPXPXPPA 709
           A  G    G S +SSL D +PR      P   PP+
Sbjct: 43  ASTGSASSGHSGSSSLYDRVPREHATSSPYHAPPS 77


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 870 PPPPPXXPPXXXXP 911
           PPPPP  PP    P
Sbjct: 783 PPPPPPPPPSSLSP 796


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 705  GGXGYGXPXXDDRG 664
            GG GYG P  DD G
Sbjct: 1286 GGGGYGVPLDDDDG 1299


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,348
Number of Sequences: 2352
Number of extensions: 10420
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)