Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N24
(1028 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.007
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.021
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.037
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.037
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.049
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 33 0.086
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.26
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.46
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 1.9
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 2.5
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 4.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 5.7
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 5.7
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 26 9.9
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 9.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/63 (33%), Positives = 23/63 (36%)
Frame = +3
Query: 840 PXPPPXSPXAPXPXPTPPXPXXPXPXXXXXXXXXXXXXXXXPPPXAPPTLXXXPXPPPPL 1019
P PPP + P P P P P P PPP PP + PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGP-----------PPPPPPPGVAGAGPPPPPP 780
Query: 1020 XPP 1028
PP
Sbjct: 781 PPP 783
Score = 35.9 bits (79), Expect = 0.009
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 836 PPPPPXXLPXCPXSXTHP-PPPXPPXPXPPXPXXPP 940
PPPPP + P P PPP P PP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 32.7 bits (71), Expect = 0.086
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 8/48 (16%)
Frame = +2
Query: 821 PPPXX--PPPPPXXLPXCPXSXTH---PPPPXPP---XPXPPXPXXPP 940
PPP P P P +P P + PPPP PP PP P PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 32.7 bits (71), Expect = 0.086
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = +2
Query: 803 APSHSXPPPXXP----PPPPXXLPXCPXSXTHPPPPXPP 907
AP+ PP P PPPP P + PPPP PP
Sbjct: 745 APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.086
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +2
Query: 803 APSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXP 913
AP PPP PPPPP + PPPP PP P
Sbjct: 755 APIMGGPPP--PPPPPGV------AGAGPPPPPPPPP 783
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.3 bits (80), Expect = 0.007
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 821 PPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
PPP PPPP P + PPPP P P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 34.3 bits (75), Expect = 0.028
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +2
Query: 803 APSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
AP+H P PP P P + P PP PP PP P PP
Sbjct: 1682 APAH---PVSTPPVRPQSA--APPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 33.9 bits (74), Expect = 0.037
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = +2
Query: 806 PSHSXPPPXX---PPPPPXXLPXCPXSXTHP--PPPXPPXPXP 919
P + PP PPPPP +P P + P PP PP P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 33.1 bits (72), Expect = 0.065
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +2
Query: 806 PSHSXPPPXXPP---PPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXP 937
P S P P PP PPP P P PPP P P P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP--PLPASSAPSVP 1744
Score = 30.7 bits (66), Expect = 0.35
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +3
Query: 876 PXPTPPX-PXXPXPXXXXXXXXXXXXXXXXPPPXAPPTLXXXPXPPPPLXP 1025
P TPP P P PPP APP P PPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.61
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +2
Query: 806 PSHSXPPPXXPPP---PPXXLPXCPXSXTHPPPPXPPXPXPP 922
PS + PP P P LP S H P P PP P P
Sbjct: 1499 PSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHP 1540
Score = 26.6 bits (56), Expect = 5.7
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +2
Query: 803 APSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPP 922
AP H+ P P P + P + P PP P PP
Sbjct: 1450 APMHAVAP--VQPKAPGMVTNAPAPSSAPAPPAPVSQLPP 1487
Score = 25.8 bits (54), Expect = 9.9
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = +2
Query: 815 SXPPPXXPPPPPXXLPXCP-XSXTH-PPPPXPPXPXPP 922
S PP P P P P S H PPPP P P
Sbjct: 1352 SLEPPVRPAVPTSPKPQIPDSSNVHAPPPPVQPMNAMP 1389
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.021
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
P+ + P P PPP P P P P PP P P P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 33.9 bits (74), Expect = 0.037
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +3
Query: 846 PPPXSPXAPXPXPTPPXPXXPXPXXXXXXXXXXXXXXXXPPPXAPPTLXXXPXPPPPLXP 1025
PP S P P PP P P PP AP P PP + P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 1026 P 1028
P
Sbjct: 204 P 204
Score = 33.1 bits (72), Expect = 0.065
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 815 SXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXP 937
S PPP P P P P + PP P P PP P
Sbjct: 170 SLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 32.7 bits (71), Expect = 0.086
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXP 937
PS P P PP P P P S PPP P P P P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSL--PPPAQPAAPVKSPPSAP 188
Score = 30.3 bits (65), Expect = 0.46
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXP-PXPXXP 937
P PP PP P P P S P PP P P P P
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 29.9 bits (64), Expect = 0.61
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = +2
Query: 842 PPPXXLPXCPXSXTHPPPPXPPXP--XPPXPXXPP 940
PP P P S PP PP P PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP 158
Score = 29.5 bits (63), Expect = 0.80
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 803 APSHSXPPPXXPPPPPXXLPXC--PXSXTHPPPPXPPXP--XPPXPXXPP 940
+P+ + P P PP P LP P + PP P P PP P P
Sbjct: 153 SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
PS + P P PPP + P P P PP PP
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 9.9
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +2
Query: 806 PSHSXPP-PXXPPPPPXXLPXCPXSXTHPPPPXPPXP--XPPXPXXPP 940
PS PP P PP P P P PP P PP P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP 172
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.037
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 800 TAPSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
+ P PP P PP P P S P PP P P P PP
Sbjct: 413 STPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP-PSAPIAPP 458
Score = 33.1 bits (72), Expect = 0.065
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +2
Query: 809 SHSXPPPXXPPPPPXX-----LPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
S+S PP PPPPP +P P + PPPP PP P PP
Sbjct: 332 SNSSLPP--PPPPPRSNAAGSIPLPPQGRSAPPPP-PPRSAPSTGRQPP 377
Score = 31.5 bits (68), Expect = 0.20
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +2
Query: 803 APSHSXPPPXXP--PPPPXXLPXCPX-SXTHPPPPXPPXPXPPXP 928
AP+ PP P PP P +P P P PP P P P P
Sbjct: 443 APAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 30.3 bits (65), Expect = 0.46
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 809 SHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
S + PP P PP P P S PP P P P PP
Sbjct: 410 SRTSTPPV--PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 3/65 (4%)
Frame = +3
Query: 840 PXPPPXSPXAPXPXPTPPXPXXPXPXXXXXXXXXXXXXXXXPP---PXAPPTLXXXPXPP 1010
P PP P AP P P P P P APP P PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 1011 PPLXP 1025
P P
Sbjct: 478 PAPAP 482
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Frame = +2
Query: 815 SXPPPXXPPPPPXXLPXCPXSXTHPP--PPXPPXP--XPPXPXXPP 940
S PP P PP P + PP P PP P P P PP
Sbjct: 426 SAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPP--XXLPXCPXSXTHPPPPXPPXPXPPXPXXP 937
PS P PP PP P P PP P P PP P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 27.9 bits (59), Expect = 2.5
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPP-PPXPPXPXPPXPXXPP 940
P + P PP P P PP PP P P PP P P
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP-PPAPAPAP 484
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXP 937
P P P PPP +P PP PP P P P
Sbjct: 241 PPERVPSLSAPAPPP--IPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = +3
Query: 840 PXPPPXSPXAPXPXPTPPXPXXPXPXXXXXXXXXXXXXXXXP--PPXAPPTLXXXPXPPP 1013
P PPP P P PP P PP APP+L P
Sbjct: 389 PAPPPAIPGRSAPA-LPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 1014 PLXP 1025
PL P
Sbjct: 448 PLPP 451
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 8/47 (17%)
Frame = +2
Query: 824 PPXXPPPPPXXLPX-CPXSXTHPP--PPXPPXPX-----PPXPXXPP 940
PP PP P LP P + PP P PP P PP P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 27.1 bits (57), Expect = 4.3
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
P+ + PP P P P S + P PP P P PP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPP 268
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = +2
Query: 815 SXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPP--XPXXPP 940
S PP P P P P PP P PP P PP
Sbjct: 386 SNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Score = 26.2 bits (55), Expect = 7.5
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +2
Query: 806 PSHSXP-PPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
PS S P PP PPP + P S P P P PP
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPP 291
Score = 26.2 bits (55), Expect = 7.5
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 7/49 (14%)
Frame = +2
Query: 803 APSHSXPPPXXPPPPPXXLPXCPXSXTHPPP-------PXPPXPXPPXP 928
A S PP PPP P + PPP PP P P P
Sbjct: 348 AGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 26.2 bits (55), Expect = 7.5
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 7/46 (15%)
Frame = +2
Query: 824 PPXXPPPPPXXLPXCPXSXTHPP--PPXPPX-----PXPPXPXXPP 940
PP PP P P P P PP P P PP PP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +2
Query: 824 PPXXPPPPPXXLPXCPXSXTHPPPPXPP 907
PP PP + PPPP PP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPP 317
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.037
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +2
Query: 821 PPPXXPPP---PPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
PPP PP P +P P T PP P P PP P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 33.5 bits (73), Expect = 0.049
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 6/48 (12%)
Frame = +2
Query: 803 APSHSXPPPXXPP------PPPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
APS PP P PPP P P PP PP PP P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 33.1 bits (72), Expect = 0.065
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +3
Query: 840 PXPPPXSPXAPXPXPTPPXPXXPXPXXXXXXXXXXXXXXXXPPPXAPPTLXXXPXPPPPL 1019
P P P P P P+ P P P PP P++ P PPP
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA----PPVPKPSVGVPPVPPPST 1215
Query: 1020 XPP 1028
PP
Sbjct: 1216 APP 1218
Score = 31.5 bits (68), Expect = 0.20
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCP-XSXTHPPPPXPPXPXPPXP 928
PS P P P P +P P S PP P P PP P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 31.1 bits (67), Expect = 0.26
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +2
Query: 803 APSHSXPPPXXPP-PPPXXLPXCP-XSXTHPPPPXPPXPXPPXP 928
AP P PP PPP P P S PP P P PP P
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
PS + PP P P +P P PP PP PP P
Sbjct: 1164 PSVAAPPV---PAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 29.5 bits (63), Expect = 0.80
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 803 APSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXP 919
AP P P P P P P S + P PP P P
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 29.5 bits (63), Expect = 0.80
Identities = 18/68 (26%), Positives = 21/68 (30%), Gaps = 5/68 (7%)
Frame = +3
Query: 840 PXPPPXSPXAPXPXPTPPXPXXPXPXXXXXXXXXXXXXXXXP-----PPXAPPTLXXXPX 1004
P P P P P P+ P P P P PP P++ P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 1005 PPPPLXPP 1028
P P PP
Sbjct: 1153 PAPSGAPP 1160
Score = 29.5 bits (63), Expect = 0.80
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
P+ S PP P P P P PP P P PP P
Sbjct: 1115 PAPSGAPPV--PKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
PS + PP P P +P P PP P P PP P
Sbjct: 1097 PSVAAPPV---PKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +2
Query: 803 APSHSXPPPXXPP-PPPXXLPXCP-XSXTHPPPPXPPXPXPPXP 928
AP P PP P P P P S PP P P PP P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = +2
Query: 791 GXXTAPSHSXPPPXXPPP---PPXXLPXCPXSXTHPPPPXPPXPXPPXPXXP 937
G P + P PPP PP P PP PP P P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 28.3 bits (60), Expect = 1.9
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 7/45 (15%)
Frame = +2
Query: 815 SXPPPXXPP-------PPPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
S PPP P P P P P PP P P PP P
Sbjct: 1061 SAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
P S PP P P P P PP P P PP P
Sbjct: 1134 PVPSGAPPV--PKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 803 APSHSXPPPXXP--PPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
AP P P P P +P P PP P P PP P PP
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP--PP 1213
Score = 27.9 bits (59), Expect = 2.5
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +2
Query: 806 PSHSXPPPXXPPP---PPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
P S P PPP P +P P PP P P PP P
Sbjct: 1053 PKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG-IPPVP 1095
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 803 APSHSXPPPXXPP-PPPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
AP P PP P P P P PP P PP P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 803 APSHSXPPPXXPPPP-PXXLPXCPXSXTHPPPPXPPXPXPPXP 928
AP P PP P P P P PP P PP P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 26.6 bits (56), Expect = 5.7
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPX-SXTHPPPPXPPXPXPPXPXXPP 940
P+ S PP P P P P S PP P P PP P PP
Sbjct: 1153 PAPSGAPPV--PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP--PP 1194
Score = 26.2 bits (55), Expect = 7.5
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +2
Query: 803 APSHSXPPPXXPP-PPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
AP P PP P P P P + PP P P P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 3/42 (7%)
Frame = +2
Query: 821 PPPXXPPP---PPXXLPXCPXSXTHPPPPXPPXPXPPXPXXP 937
PPP PP P LP P PP P P P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3
Query: 840 PXPPPXSPXAPXPXPTPPXPXXPXP 914
P P P + P P PT P P P
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPVPAP 1242
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.5 bits (73), Expect = 0.049
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +2
Query: 824 PPXXPPPPPXXLPXCPXSXTHPPPPXPP 907
PP PPPPP P S PPPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPS--QPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 963 PPPXAPPTLXXXPXPPPPLXPP 1028
PPP PP P PPP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 887 PPPPXPPXPXPPXPXXPP 940
PPPP PP PP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPP 27
Score = 26.2 bits (55), Expect = 7.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 869 PXSXTHPPPPXPPXPXPPXPXXPP 940
P PPPP P P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 32.7 bits (71), Expect = 0.086
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 821 PPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXPP 940
P P PP P +P P PP P P P P P PP
Sbjct: 102 PLPREPPLPNEPVPEEPLPG-EPPLPDEPVPEEPLPGEPP 140
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXP 937
P PP P P LP P P P P PP P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.1 bits (67), Expect = 0.26
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 821 PPPXXPPPPPXXLPXCPXSXTHPPPPXPPXP 913
PPP PP S +PPPP PP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 30.7 bits (66), Expect = 0.35
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 800 TAPSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXP 913
+AP+ PP PP P + PPP PP P
Sbjct: 159 SAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 30.3 bits (65), Expect = 0.46
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 803 APSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
AP+ S P PPP P T P P P PP P
Sbjct: 155 APTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 30.3 bits (65), Expect = 0.46
Identities = 22/85 (25%), Positives = 25/85 (29%), Gaps = 13/85 (15%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPP-------------XPPXPXPPXPXXPPXX 946
P + P P PPPPP LP + + P P PP P P PP
Sbjct: 229 PKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTN 288
Query: 947 XXXXXXXXXXXXXXXXXXXPXPXSP 1021
P P SP
Sbjct: 289 ASTRSTGTSSSMAHSYDSPPSPSSP 313
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +3
Query: 846 PPPXSPXAPXPXPTPPXPXXPXPXXXXXXXXXXXXXXXXPPPXAPPTLXXXPXPPPPLXP 1025
PPP P P P P A P L P PPPP P
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADP-LPAPPPPPPPTLP 247
Query: 1026 P 1028
P
Sbjct: 248 P 248
Score = 25.8 bits (54), Expect = 9.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 806 PSHSXPPPXXPPPP 847
PS PPP PPPP
Sbjct: 184 PSDYNPPPPPPPPP 197
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.46
Identities = 21/47 (44%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -3
Query: 939 GGXXGXGGXGXGGXGG--GGWVXEXGXLGRXXGGGGGXXGGGXEWEG 805
GG G G GG GG GG G LG GGG G GGG G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLG-GFGGGPGGFGGGPGGHG 269
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 939 GGXXGXGGXGXGGXGG-GGWVXEXGXLGRXXGGGGGXXG 826
GG G G GG GG GG+ E G G GGG G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
Score = 28.3 bits (60), Expect = 1.9
Identities = 19/40 (47%), Positives = 19/40 (47%)
Frame = -3
Query: 939 GGXXGXGGXGXGGXGGGGWVXEXGXLGRXXGGGGGXXGGG 820
GG G GG G GG GG G G GGG G GGG
Sbjct: 221 GGHGGFGG-GPGGFEGGPGGFGGGPGG--FGGGLGGFGGG 257
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = -3
Query: 939 GGXXGXGGXGXGGXGGGGWVXEXGXLGRXXGGGGGXXGGG 820
GG G GG G GG GGG G G G GG G G
Sbjct: 23 GGRGGFGG-GRGGARGGG---RGGARGGRGGRGGARGGRG 58
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -3
Query: 939 GGXXGXGGXGXGGXGGGGWVXEXGXLGRXXGGGGGXXGG 823
GG G G GG G GG G G GG GG GG
Sbjct: 26 GGFGGGRGGARGG-GRGGARGGRGGRGGARGGRGGSSGG 63
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -3
Query: 936 GXXGXGGXGXGGXGG--GGWVXEXGXLGRXXGGGGGXXGGGXEWEG 805
G G G GG GG GG G G GGG G GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 911 GWXGGXGGGGXGXGGXWGGGXGXG 840
G GG GG G GG GG G G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGG 39
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 6/51 (11%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLP--XCPXSXTHPPP----PXPPXPXPPXPXXPP 940
P+H P PPPP P P H P P PP P PP
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 248
Score = 27.1 bits (57), Expect = 4.3
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 6/51 (11%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLP--XCPXSXTHPPP----PXPPXPXPPXPXXPP 940
P H P PPPP P P H P P PP P PP
Sbjct: 237 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 287
Score = 27.1 bits (57), Expect = 4.3
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 6/51 (11%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLP--XCPXSXTHPPP----PXPPXPXPPXPXXPP 940
P H P PPPP P P H P P PP P PP
Sbjct: 276 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 326
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPP-XPXPPXPXXP 937
P + PP P PP P P PP PP PP P
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAP 538
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 806 PSHSXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPP 922
PS+ P P P P P + P P PP P P
Sbjct: 474 PSNLVPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAP 512
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 815 SXPPPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXP 928
S P P PP P P S T P P P P P P
Sbjct: 574 SRPSPLSLPPEPLLSPTIDYSAT--PFPLEPPPESPGP 609
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 836 PPPPPXXLPXCPXSXTHPPPPXPPXPXP 919
PPPPP LP P PP P
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 939 GGXXGXGGXGXGGXGGGGWVXEXGXLGRXXGGGGGXXGG 823
GG G G GG GG G G G GGG GG
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGG--GSRGGFGGGSRGG 177
Score = 26.2 bits (55), Expect = 7.5
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = -3
Query: 936 GXXGXGGXGX--GGXGGGGWVXEXGXLGRXXGGGGGXXGGG 820
G G GG G GG GG G GG G GGG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 846 PPPXSPXAPXPXPTPPXPXXPXP 914
P P AP P P PP P P
Sbjct: 320 PIEVKPAAPVPTPAPPVKTSPHP 342
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 9.9
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +2
Query: 806 PSHSXP--PPXXPPPPPXXLPXCPXSXTHPPPPXPPXPXPPXPXXP 937
PS+S P PP P P P P P PP P P
Sbjct: 100 PSYSQPSQPPKEPALPSRGTPSLPSRPGSRPSVLNQEQVPPPPVRP 145
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,153,394
Number of Sequences: 5004
Number of extensions: 32758
Number of successful extensions: 614
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 537243034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -