Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N22
(911 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.13
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.13
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.30
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.69
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 29 0.92
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 6.5
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 8.5
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +1
Query: 718 PFPXGXXGPPXPXXPXPSXPPPXPPXXXXXXXXXXXXXXXXXXPXXPPPPXPPPXXPPXL 897
P P PP P PS PPP P P P P P P L
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL 190
Score = 30.3 bits (65), Expect = 0.40
Identities = 21/78 (26%), Positives = 21/78 (26%), Gaps = 2/78 (2%)
Frame = +1
Query: 673 PPXXXXXXXXXXRGXPFPXGXXGPPXPXXPXPSXPPPXPPXXXXXXXXXXXXXXXXXXPX 852
PP P P P P PS PP P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 853 XPP--PPXPPPXXPPXLS 900
P PP PP PP LS
Sbjct: 190 LPSAVPPMPPKVPPPPLS 207
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.13
Identities = 25/91 (27%), Positives = 25/91 (27%), Gaps = 6/91 (6%)
Frame = +2
Query: 647 PPPXXXXXXPPXXXPXXXXGXGAPPFPXXXXVPPXP-----XXXXPXXXPXPPPPXPXXX 811
PP PP P APP P PP P P PP P P
Sbjct: 1112 PPVPAPSGAPPVPKP----SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVA 1167
Query: 812 XXXXXXPXXXXPXXXXP-PXXPPXXPPXXXP 901
P P P PP PP P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 31.9 bits (69), Expect = 0.13
Identities = 25/91 (27%), Positives = 25/91 (27%), Gaps = 6/91 (6%)
Frame = +2
Query: 647 PPPXXXXXXPPXXXPXXXXGXGAPPFPXXXXVPPXPXXXX---PXXXPX---PPPPXPXX 808
PP PP P APP P PP P P P PP P P
Sbjct: 1131 PPVPVPSGAPPVPKP----SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA 1186
Query: 809 XXXXXXXPXXXXPXXXXPPXXPPXXPPXXXP 901
P P PP PP P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +2
Query: 647 PPPXXXXXXPPXXXPXXXXGXGAPPFPXXXXVPPXPXXXXPXXXPXPPPPXPXXXXXXXX 826
P P PP P G PP P PP P PP P
Sbjct: 1170 PVPAPSSGIPPVPKP----AAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Query: 827 XPXXXXPXXXXPPXXPP 877
P P PP P
Sbjct: 1226 LPPVPVPTAKAPPVPAP 1242
Score = 30.7 bits (66), Expect = 0.30
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = +2
Query: 647 PPPXXXXXXPPXXXPXXXXGXGAPPFPXXXXVPPXPXXXXPXXXPXPPPPXPXXXXXXXX 826
P P PP P APP P PP P PP P P
Sbjct: 1023 PVPLPSADAPPIPVPST-----APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIP 1077
Query: 827 XPXXXXPXXXXPPXXPPXXPP 889
P P P PP P
Sbjct: 1078 AP-SGAPPVPAPSGIPPVPKP 1097
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/86 (25%), Positives = 22/86 (25%), Gaps = 1/86 (1%)
Frame = +2
Query: 647 PPPXXXXXXPPXXXPXXXXGXGAPPFPXXXX-VPPXPXXXXPXXXPXPPPPXPXXXXXXX 823
PP PP P APP P VPP P P P P
Sbjct: 1083 PPVPAPSGIPPVPKP----SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 824 XXPXXXXPXXXXPPXXPPXXPPXXXP 901
P P P PP P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/81 (23%), Positives = 19/81 (23%)
Frame = +2
Query: 647 PPPXXXXXXPPXXXPXXXXGXGAPPFPXXXXVPPXPXXXXPXXXPXPPPPXPXXXXXXXX 826
P P P P P P PP P PP P P
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG-----IPPVPKPSVAAPPVP 1105
Query: 827 XPXXXXPXXXXPPXXPPXXPP 889
P P P PP P
Sbjct: 1106 KPSVAVPPVPAPSGAPPVPKP 1126
Score = 26.2 bits (55), Expect = 6.5
Identities = 21/86 (24%), Positives = 21/86 (24%), Gaps = 5/86 (5%)
Frame = +2
Query: 647 PPPXXXXXXPPXXXPXXXXGXGAPPFPXXXXVPPXP-----XXXXPXXXPXPPPPXPXXX 811
P P PP P PP P PP P P PP P P
Sbjct: 1093 PVPKPSVAAPPVPKP----SVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVA 1148
Query: 812 XXXXXXPXXXXPXXXXPPXXPPXXPP 889
P P PP P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAP 1174
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +2
Query: 620 KQXILFFXXPPPXXXXXXPPXXXPXXXXGXGAPPFPXXXXVPPXPXXXXPXXXPXPPPPX 799
+Q L PPP P P P PP P P PPPP
Sbjct: 723 EQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Query: 800 P 802
P
Sbjct: 783 P 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = +2
Query: 743 PPXPXXXXPXXXPXP---PPPXPXXXXXXXXXPXXXXPXXXXPPXXPPXXPP 889
PP P P P P PPP P P PP PP PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP--PPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.69
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +2
Query: 650 PPXXXXXXPPXXXPXXXXGX-GAPPFPXXXXVPPXPXXXXPXXXPXPP-PPXP 802
PP PP P G APP P + P P P PP P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 29.1 bits (62), Expect = 0.92
Identities = 25/93 (26%), Positives = 25/93 (26%), Gaps = 7/93 (7%)
Frame = +1
Query: 640 PPPPXXXXXX----PPPXXXXXXXXXXRGXPFPXGXXGPPXPXX---PXPSXPPPXPPXX 798
PPPP PP R P G PP P PPP P
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP-STGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 799 XXXXXXXXXXXXXXXXPXXPPPPXPPPXXPPXL 897
P P PP PP PP L
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSL 431
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/96 (25%), Positives = 24/96 (25%), Gaps = 11/96 (11%)
Frame = +2
Query: 647 PPPXXXXXXPPXXXPXXXXGXGAPPFPXXXXVPPXPXXXXPXXX-------PXPPPPXPX 805
PPP P G APP P P P P PPP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 806 XXXXXXXX----PXXXXPXXXXPPXXPPXXPPXXXP 901
P PP PP PP P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 27.9 bits (59), Expect = 2.1
Identities = 23/87 (26%), Positives = 23/87 (26%), Gaps = 2/87 (2%)
Frame = +2
Query: 647 PPPXXXXXXPPXXXPXXXXGXGAPPFPXXXXV--PPXPXXXXPXXXPXPPPPXPXXXXXX 820
PP PP G PP V PP P P PP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPL--GNASR 411
Query: 821 XXXPXXXXPXXXXPPXXPPXXPPXXXP 901
P P PP PP PP P
Sbjct: 412 TSTPPVPTPPSL-PPSAPPSLPPSAPP 437
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 287 AIAGPAXINPSRTXRPTFSIFLKSXHLGSGAALTAP 180
AIA P I+P + RP S+F+KS A + +P
Sbjct: 202 AIADPNIISPIDSVRPLLSLFIKSITSAISALILSP 237
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 742 PPXPXXPXPSXPPPXPP 792
PP P PS PPP PP
Sbjct: 13 PPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 847 PXXPPPPXPPPXXPP 891
P PPPP PPP P
Sbjct: 6 PGNPPPPPPPPGFEP 20
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 710 GAPPFPXXXXVPPXPXXXXPXXXPXPPPP 796
G PP P PP P P P PPPP
Sbjct: 7 GNPPPP-----PPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 725 PXXXXVPPXPXXXXPXXXPXPPPP 796
P PP P P P PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 24.6 bits (51), Expect(2) = 1.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 856 PPPPXPPPXXPP 891
PPPP PP PP
Sbjct: 10 PPPPPPPGFEPP 21
Score = 21.8 bits (44), Expect(2) = 9.1
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 767 PXXXPXPPPPXP 802
P P PPPP P
Sbjct: 5 PPGNPPPPPPPP 16
Score = 21.8 bits (44), Expect(2) = 1.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 847 PXXPPPPXPPP 879
P PPP PPP
Sbjct: 5 PPGNPPPPPPP 15
Score = 21.8 bits (44), Expect(2) = 9.1
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = +2
Query: 830 PXXXXPXXXXPPXXPPXXPP 889
P P PP PP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 847 PXXPPPPXPPPXXPP 891
P PPP PPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 23.4 bits (48), Expect(2) = 2.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 856 PPPPXPPP 879
PPPP PPP
Sbjct: 190 PPPPPPPP 197
Score = 22.6 bits (46), Expect(2) = 2.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 859 PPPXPPPXXPPXL 897
P P PPP PP L
Sbjct: 234 PLPAPPPPPPPTL 246
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 4.9
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -1
Query: 890 GGXXGGGXGGGGXXGXXXXXXXXXXXXXXXXXXGGXGGGXEGXGXXGXGGPXXPXGKGXP 711
GG G G G GG G GG GGG G G G P G G P
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGP---------GGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/54 (25%), Positives = 14/54 (25%)
Frame = +1
Query: 730 GXXGPPXPXXPXPSXPPPXPPXXXXXXXXXXXXXXXXXXPXXPPPPXPPPXXPP 891
G P P P P P P PP P PP PP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +2
Query: 674 PPXXXPXXXXGXGAPPFPXXXXVPPXPXXXXPXXXPXPPPPXP 802
PP P A FP +P P P PPP P
Sbjct: 252 PPLSIPNVLPFTAAQHFPGMPAMPMMNVPMGPGGAPLVPPPPP 294
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,565,988
Number of Sequences: 5004
Number of extensions: 45831
Number of successful extensions: 285
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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