Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N21
(947 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 40 4e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.019
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.059
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.31
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.41
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.55
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 2.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 2.8
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 6.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 8.9
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 8.9
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Frame = +2
Query: 767 PPXXTXPRPSPPXLPXXPRXXXP---AXPPPXPXXXXXXXPXPXTXXXSPFPPPPPXXPX 937
PP + P PSP P P P + PPP P S PP PP P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 938 PP 943
PP
Sbjct: 204 PP 205
Score = 31.9 bits (69), Expect = 0.14
Identities = 27/97 (27%), Positives = 28/97 (28%), Gaps = 1/97 (1%)
Frame = +2
Query: 647 LXEPPPXPP*TEXPPXXPXSXIRXAXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRX 826
L P PP PP P S + P P P SPP P P
Sbjct: 137 LRPPTSAPPRPSIPPPSPASA---PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP-S 192
Query: 827 XXPAXPPPXPXXXXXXXPXPXT-XXXSPFPPPPPXXP 934
P PP P P T S F PP P
Sbjct: 193 AVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAP 229
Score = 29.9 bits (64), Expect = 0.55
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 767 PPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPPPPXXPXPP 943
P P P P P+ PPP P P P P PPP P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP---PIPSKAPPIPSSLPPPAQPAAP 180
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.5 bits (83), Expect = 0.003
Identities = 34/138 (24%), Positives = 41/138 (29%), Gaps = 2/138 (1%)
Frame = +2
Query: 536 TPPQXPTXXXXPXVPRPADXPLXRVXWIPXXXXT--LXRLXEPPPXPP*TEXPPXXPXSX 709
TPP + P P P P + IP + PP P + P P
Sbjct: 1049 TPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPS 1108
Query: 710 IRXAXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPX 889
+ A P P P P P P P+ A P P P P P
Sbjct: 1109 V--AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP---SGAPPVPK 1163
Query: 890 TXXXSPFPPPPPXXPXPP 943
+P P P P PP
Sbjct: 1164 PSVAAP-PVPAPSSGIPP 1180
Score = 35.9 bits (79), Expect = 0.008
Identities = 25/93 (26%), Positives = 29/93 (31%), Gaps = 1/93 (1%)
Frame = +2
Query: 659 PPXPP*TEXPPXXPXSXIRXAXXXXXXXXXXXAXP-HPPXXTXPRPSPPXLPXXPRXXXP 835
P PP PP P S I + + P P T P +P P+
Sbjct: 963 PAAPP--SIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSK 1020
Query: 836 AXPPPXPXXXXXXXPXPXTXXXSPFPPPPPXXP 934
A P P P P P T P P P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTSTPPVP 1053
Score = 33.5 bits (73), Expect = 0.044
Identities = 25/96 (26%), Positives = 29/96 (30%), Gaps = 1/96 (1%)
Frame = +2
Query: 659 PPXPP*TEXPPXXPXSXIRXAXXXXXXXXXXXAXPHP-PXXTXPRPSPPXLPXXPRXXXP 835
PP P T PP S + P P P P+P +P P+
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 836 AXPPPXPXXXXXXXPXPXTXXXSPFPPPPPXXPXPP 943
A PP P P P P P P P P
Sbjct: 1101 A--PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 33.1 bits (72), Expect = 0.059
Identities = 37/145 (25%), Positives = 42/145 (28%), Gaps = 10/145 (6%)
Frame = +2
Query: 539 PPQXPTXXXXPXVPRP-ADXPLXRVXWIPXXXXTLXRLXEPPPXPP*TEXPPXXPXSXIR 715
PP P VP P AD P V P + PP P + P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPV---PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPA 1068
Query: 716 XAXXXXXXXXXXXAXPHP-PXXTXPRPSP----PXLPXX----PRXXXPAXPPPXPXXXX 868
+ A P P P P P P P +P P P+ PP P
Sbjct: 1069 PSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSV 1128
Query: 869 XXXPXPXTXXXSPFPPPPPXXPXPP 943
P P P P P P P
Sbjct: 1129 AAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 32.7 bits (71), Expect = 0.078
Identities = 38/156 (24%), Positives = 45/156 (28%), Gaps = 21/156 (13%)
Frame = +2
Query: 542 PQXPTXXXXPXVPRPADXPLXRVXWIPXXXXTLXRLXEP----PPXPP*TEXPPXXPXSX 709
P P P VP P+ P +P + +P PP P + PP S
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPP-----VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSV 1128
Query: 710 IRXAXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRXXXPAXP--------PPXPXXX 865
A P P P P+P P P+ A P PP P
Sbjct: 1129 ---AAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Query: 866 XXXXPXPXTXXXSPFP---------PPPPXXPXPPT 946
P P P P PPP P PT
Sbjct: 1186 AGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Score = 31.5 bits (68), Expect = 0.18
Identities = 30/135 (22%), Positives = 34/135 (25%)
Frame = +2
Query: 539 PPQXPTXXXXPXVPRPADXPLXRVXWIPXXXXTLXRLXEPPPXPP*TEXPPXXPXSXIRX 718
PP P VP P+ P + + P P P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG---- 1157
Query: 719 AXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTXX 898
A P P P P P P P+ PP P P P
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAA--GVPPVPPPSEAPPVPKPSVGVPPVPPPST 1215
Query: 899 XSPFPPPPPXXPXPP 943
P P P P P
Sbjct: 1216 APPVPTPSAGLPPVP 1230
Score = 31.1 bits (67), Expect = 0.24
Identities = 32/134 (23%), Positives = 36/134 (26%)
Frame = +2
Query: 539 PPQXPTXXXXPXVPRPADXPLXRVXWIPXXXXTLXRLXEPPPXPP*TEXPPXXPXSXIRX 718
PP P VP P+ P + P P P P P S I
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 719 AXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTXX 898
P PP P P P P P+ PP P P P
Sbjct: 1181 VPKPAAG-----VPPVPPPSEAP-PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA 1234
Query: 899 XSPFPPPPPXXPXP 940
+P P P P P
Sbjct: 1235 KAP-PVPAPSSEAP 1247
Score = 29.5 bits (63), Expect = 0.72
Identities = 31/136 (22%), Positives = 39/136 (28%), Gaps = 2/136 (1%)
Frame = +2
Query: 542 PQXPTXXXXPXVPRP--ADXPLXRVXWIPXXXXTLXRLXEPPPXPP*TEXPPXXPXSXIR 715
P P P VP+P A P+ +P + + P P P P +
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVP----VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVA 1167
Query: 716 XAXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTX 895
A P P P P P P P+ PP P P P +
Sbjct: 1168 -APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV-GVPPVPPPSTAPPVPTP-SA 1224
Query: 896 XXSPFPPPPPXXPXPP 943
P P P P P
Sbjct: 1225 GLPPVPVPTAKAPPVP 1240
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Frame = +2
Query: 770 PXXTXPRPSPPXLPXX-PRXXXPAXP----PPXPXXXXXXXPXPXTXXXSPFPPPPPXXP 934
P P+ PP P P PA P PP P P P +P P P P
Sbjct: 982 PTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 935 XPP 943
P
Sbjct: 1042 PVP 1044
Score = 26.6 bits (56), Expect = 5.1
Identities = 28/127 (22%), Positives = 34/127 (26%), Gaps = 2/127 (1%)
Frame = +2
Query: 542 PQXPTXXXXPXVPRP--ADXPLXRVXWIPXXXXTLXRLXEPPPXPP*TEXPPXXPXSXIR 715
P P P VP+P A P+ P + PP P + PP +
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP--SVAAPPVPAPSSGIPPVPKPAA-- 1186
Query: 716 XAXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTX 895
P P P P P P P P P P P P +
Sbjct: 1187 -GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSE 1245
Query: 896 XXSPFPP 916
S P
Sbjct: 1246 APSVSTP 1252
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.1 bits (82), Expect = 0.004
Identities = 22/61 (36%), Positives = 24/61 (39%)
Frame = +2
Query: 761 PHPPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPPPPXXPXP 940
P PP P P+P +P P PPP P P P P PPPP P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP-------PPPGVAGAGP--PPPP--PPP 782
Query: 941 P 943
P
Sbjct: 783 P 783
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 818 PRXXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPPPP 925
P PA P P P P P PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 842 PPPXPXXXXXXXPXPXTXXXSPFPPPPPXXPXPP 943
PPP P P P P PPP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPI---PVPPPAPIMGGPP 762
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.7 bits (76), Expect = 0.019
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +2
Query: 761 PHPPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPPPPXXP 934
P PP R PP P PPP P P +P PPPP P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 33.9 bits (74), Expect = 0.034
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +2
Query: 761 PHPPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPP-PPXXPX 937
P P + P +PP LP P P P P P PP PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 938 PP 943
PP
Sbjct: 476 PP 477
Score = 33.1 bits (72), Expect = 0.059
Identities = 24/95 (25%), Positives = 26/95 (27%)
Frame = +2
Query: 656 PPPXPP*TEXPPXXPXSXIRXAXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRXXXP 835
PPP P P P PP + P +PP LP P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP--SLPPSAPPSLPMGA-PAAP 447
Query: 836 AXPPPXPXXXXXXXPXPXTXXXSPFPPPPPXXPXP 940
PP P P P P PP P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 32.3 bits (70), Expect = 0.10
Identities = 23/90 (25%), Positives = 26/90 (28%), Gaps = 3/90 (3%)
Frame = +2
Query: 686 PPXXPXSXIRXAXXXXXXXXXXXAXPHPPXXTXP---RPSPPXLPXXPRXXXPAXPPPXP 856
PP P A A P PP + P R PP PA PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 857 XXXXXXXPXPXTXXXSPFPPPPPXXPXPPT 946
P + PP P PP+
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPS 426
Score = 30.3 bits (65), Expect = 0.41
Identities = 27/103 (26%), Positives = 31/103 (30%), Gaps = 6/103 (5%)
Frame = +2
Query: 656 PPPXPP*TEXPPXXPXSXI-RXAXXXXXXXXXXXAXPHPPXXTXPR-----PSPPXLPXX 817
PPP PP + P R A PP + R P+PP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP--PAI 395
Query: 818 PRXXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPPPPXXPXPPT 946
P PA PP P P P PP PP+
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPS 438
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = +2
Query: 770 PXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPP 919
P + P P P P P PP P P + P PPP
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 27.1 bits (57), Expect = 3.9
Identities = 26/94 (27%), Positives = 29/94 (30%), Gaps = 4/94 (4%)
Frame = +2
Query: 656 PPPXPP*TEX----PPXXPXSXIRXAXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPR 823
PPP PP + PP P I P PP + R S L +
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP-PLPPPSS--RVSAAALAANKK 309
Query: 824 XXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPPPP 925
P PPP P S PPPPP
Sbjct: 310 RPPP--PPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.059
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 761 PHPPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXP 886
P PP P PP P P A PPP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 31.1 bits (67), Expect = 0.24
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +2
Query: 767 PPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPPP 922
PP + P P PP + P P PP P P P +P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPP----PPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = +2
Query: 785 PRPSPPXLPXX---PRXXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPPPP 925
P +PP P P+ P PPP P P P PPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPP-PMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 833 PAXPPPXPXXXXXXXPXPXTXXXSPFPPPPPXXPXPPT 946
PA P P P +P PPPP P PP+
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTP-PPPPMSVPPPPS 1719
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.31
Identities = 32/136 (23%), Positives = 39/136 (28%), Gaps = 2/136 (1%)
Frame = +2
Query: 542 PQXPTXXXXPXVPRPADXPLXRVXWIPXXXXTLXRLXEPPPXPP*TEXP--PXXPXSXIR 715
P P P VP P +P L + +PP P E P P P + +
Sbjct: 542 PSAPQRPAAPVVPEAPSVPQRPA--VPVVPEALS-VPQPPVAPVAPEVPSVPQPPVAPVV 598
Query: 716 XAXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTX 895
P P RP+ P +P P P P P P
Sbjct: 599 PEAPSVPQPPVAPVAPEVPS-VPQRPAVPVVPEAPSVPQPPAAPVVPEV-----PSVPQR 652
Query: 896 XXSPFPPPPPXXPXPP 943
P P P P PP
Sbjct: 653 PAVPVVPEAPSVPQPP 668
Score = 27.1 bits (57), Expect = 3.9
Identities = 23/96 (23%), Positives = 24/96 (25%), Gaps = 1/96 (1%)
Frame = +2
Query: 659 PPXPP*TEXPPXXPXSXIRXAXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRXXXPA 838
PP P P P A P P P PP P P
Sbjct: 532 PPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSV-PQPPVAPVAPEVPSVP 590
Query: 839 XPPPXP-XXXXXXXPXPXTXXXSPFPPPPPXXPXPP 943
PP P P P +P P P P P
Sbjct: 591 QPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVP 626
Score = 27.1 bits (57), Expect = 3.9
Identities = 25/107 (23%), Positives = 34/107 (31%), Gaps = 1/107 (0%)
Frame = +2
Query: 539 PPQXPTXXXXPXVPRPADXPLXRVXWIPXXXXTLXRLXEPPPXPP*TEXPPXXPXSXIRX 718
PP P P VP+P P+ +P + +PP P E P +
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPV-----VP----EAPSVPQPPVAPVAPEVPSVPQRPAVPV 627
Query: 719 AXXXXXXXXXXXAXPHPPXXTXP-RPSPPXLPXXPRXXXPAXPPPXP 856
A P + P RP+ P +P P P P P
Sbjct: 628 VPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVP 674
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +2
Query: 767 PPXXTXPRPSPPXLPXXPRXXXPAXPPPXPXXXXXXXPXPXTXXXSPFPPPPPXXPXPP 943
P T P PP P P PP P P +P P P P P
Sbjct: 507 PSVITPSVPQPPAAPVVPEAPSVHQPPAAP--VAPEVPSAPQRPAAPVVPEAPSVPQRP 563
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 30.3 bits (65), Expect = 0.41
Identities = 31/137 (22%), Positives = 37/137 (27%), Gaps = 3/137 (2%)
Frame = +2
Query: 539 PPQXPTXXXXPXVPRPADXPLXRVXWIPXXXXTLXRLXEPPPXPP*TEXP--PXXPXSXI 712
PP PT P A P +V T PP P P P P S +
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGET-YHPPTASGTRVPPVQQPSHPNPYTPVAPQSPV 966
Query: 713 RXAXXXXXXXXXXXAXPHPPXXTXPRPSPPXLPXXPRXXXPAXPPPX-PXXXXXXXPXPX 889
A + P+ P P P PPP P P
Sbjct: 967 AAASRISSSPNMPPSNPYTPIAVASSTVNPAHTYKPHGGSQIVPPPKQPANRVVPLPPTA 1026
Query: 890 TXXXSPFPPPPPXXPXP 940
+ S + PP P P
Sbjct: 1027 SQRASAYEPPTVSVPSP 1043
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.55
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -3
Query: 924 GGGGGKGEXXXVXGXGXXXXXXXGXGGGXAGXXXRGXXGRXGGEGRGXVXXGGWG 760
G GG+G G G G GGG G G G GG G GG G
Sbjct: 6 GSRGGRGGSRG--GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 887 GGXGXXXCXXXGGEEALQGXXXXGPXXGXGGRGGGXWXXGG 765
GG GG +G G G GGRGG GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.4 bits (48), Expect(2) = 2.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 908 FPPPPPXXPXPP 943
FPPPPP P PP
Sbjct: 944 FPPPPP--PPPP 953
Score = 22.6 bits (46), Expect(2) = 2.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 890 TXXXSPFPPPPPXXP 934
T P PPPPP P
Sbjct: 900 TIITHPTPPPPPPLP 914
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +2
Query: 848 PXPXXXXXXXPXPXTXXXSPFPPPPPXXPXP 940
P P P T S + PPPP P P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 905 PFPPPPPXXPXPP 943
P PPPPP PP
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 21.4 bits (43), Expect(2) = 2.8
Identities = 9/30 (30%), Positives = 10/30 (33%)
Frame = +2
Query: 767 PPXXTXPRPSPPXLPXXPRXXXPAXPPPXP 856
PP P + P P PPP P
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 818 GPXXGXGGRGGGXWXXGGG 762
GP G GGRGGG GG
Sbjct: 121 GPHGGFGGRGGGRMGGRGG 139
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 5.1
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = -3
Query: 933 GXXGGGGGKGEXXXVXGXGXXXXXXXGXGGGXAGXXXRGXXGRXGGEGRGXVXXGGW 763
G G GGG G G G G GGG G G G GG G G GW
Sbjct: 222 GHGGFGGGPG--GFEGGPGGFGGGPGGFGGGLGGFG--GGPGGFGG-GPGGHGGPGW 273
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 855 GXGGGXAGXXXRGXXGRXGGEGRGXVXXGGWG 760
G GG G G G GGEG GG+G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFG 227
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 785 PRPSPPXLPXXPRXXXPAXPPPXP 856
P +PP P P P+ PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -3
Query: 942 GGXGXXGGGGGKGEXXXVXGXGXXXXXXXGXGGGXAGXXXRGXXGRXGG 796
G G GG GG+G G G G GG +G RG G
Sbjct: 448 GSRGGRGGFGGRGGFGGRGGFGGGRGR--GRGGARSGNPNRGSVAPFSG 494
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 8.9
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -3
Query: 942 GGXGXXGG-GGGKGEXXXVXGXGXXXXXXXGXGGGXAGXXXRGXXGRXGGEGRG 784
G G GG GG +G G G GGG G G G G RG
Sbjct: 139 GRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,878,422
Number of Sequences: 5004
Number of extensions: 53870
Number of successful extensions: 328
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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