Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_N19
         (1209 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.4  
11_01_0133 + 1121392-1122731,1123417-1123858                           30   3.2  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    30   4.2  
06_02_0175 - 12624608-12625297                                         30   4.2  
04_04_0679 + 27214577-27215023                                         30   4.2  
03_01_0515 - 3864796-3865425                                           29   7.3  
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979     29   9.7  

>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 18/66 (27%), Positives = 21/66 (31%)
 Frame = +2

Query: 806  PPPXPXLGXXXLXHPXDXPXPPXPXXXXHLXPPPQDXPXRXHXXXXXXPQAXILXXQXXR 985
            PPP P +       P   P PP P       PPP   P          P A  +  +   
Sbjct: 605  PPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPA 664

Query: 986  PLSPXP 1003
            P  P P
Sbjct: 665  PPPPPP 670



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = +2

Query: 806 PPPXPXLGXXXLXHPXDXPXPPXPXXXXHLXPPPQDXP 919
           PPP P L    +  P   P PP       + PPP   P
Sbjct: 588 PPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPP 625



 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = +2

Query: 806 PPPXPXLGXXXLXHPXDXPXPPXPXXXXHLXPPPQDXP 919
           PPP P         P   P PP P       PPP   P
Sbjct: 572 PPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPP 609


>11_01_0133 + 1121392-1122731,1123417-1123858
          Length = 593

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 14/40 (35%), Positives = 15/40 (37%)
 Frame = +2

Query: 806 PPPXPXLGXXXLXHPXDXPXPPXPXXXXHLXPPPQDXPXR 925
           PPP P      L  P     PP P     L PPP   P +
Sbjct: 134 PPPPPPPSHPALLPPDATAPPPPPTSVAALPPPPPPQPDK 173


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +2

Query: 806 PPPXPXLGXXXLXHPXDXPXPPXPXXXXHLXPPP 907
           PPP P  G      P   P PP P       PPP
Sbjct: 93  PPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPP 126


>06_02_0175 - 12624608-12625297
          Length = 229

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -1

Query: 918 GXSWGGGXRWXXXXGXGGXGXSXGXSRXXXPSXGXGGG 805
           G SW  G  W      GG G S G         G GGG
Sbjct: 78  GSSWSYGWGWGWGTDSGGGGSSGGGGGGGGGGGGGGGG 115


>04_04_0679 + 27214577-27215023
          Length = 148

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -1

Query: 906 GGGXRWXXXXGXGGXGXSXGXSRXXXPSXGXGGG 805
           GGG  W    G GG G   G       S G GGG
Sbjct: 94  GGGFGWAGGQGHGGWGAGAGAFGGGSGSGGGGGG 127


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 16/55 (29%), Positives = 17/55 (30%)
 Frame = +2

Query: 755 PXXEXSNXGXTXAXXXXPPPXPXLGXXXLXHPXDXPXPPXPXXXXHLXPPPQDXP 919
           P    S+     A    PPP P         P   P PP P       PPP   P
Sbjct: 54  PPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP 108


>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
          Length = 304

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 15/47 (31%), Positives = 15/47 (31%)
 Frame = +2

Query: 779 GXTXAXXXXPPPXPXLGXXXLXHPXDXPXPPXPXXXXHLXPPPQDXP 919
           G   A    PPP P         P   P  P P    H  PPP   P
Sbjct: 47  GQHHALPHPPPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPPQKP 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,889,506
Number of Sequences: 37544
Number of extensions: 139822
Number of successful extensions: 753
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3701409336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)