Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_N19
         (1209 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   2.4  
SB_33909| Best HMM Match : FH2 (HMM E-Value=0)                         31   2.4  
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.6  
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   9.8  
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)                  29   9.8  

>SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 535

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = -1

Query: 918 GXSWGGGXRWXXXXGXGGXGXSXGXSRXXXPSXGXGGG 805
           G   GGG       G GG G S G S     S G GGG
Sbjct: 469 GFGGGGGPNGAGGGGGGGGGYSGGASGSRSNSCGGGGG 506


>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
          Length = 1063

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 806 PPPXPXLGXXXLXHPXDXPXPPXPXXXXHLXPPPQDXP 919
           PPP P +    L  P   P PP P     L  PP   P
Sbjct: 680 PPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPP 717


>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 669

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +2

Query: 806 PPPXPXLGXXXLXHPXDXPXPPXPXXXXHLXPPP 907
           PPP P  G      P + P PP P       PPP
Sbjct: 376 PPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPP 409


>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 795

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = +2

Query: 806 PPPXPXLGXXXLXHP--XDXPXPPXPXXXXHLXPPPQDXPXRXH 931
           PPP P  G      P   D P PP P     L PP +  P   H
Sbjct: 702 PPPPPPTGIDIPHSPSKDDLPLPP-PPEEVSLPPPDESPPSSKH 744


>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
          Length = 457

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = +2

Query: 806 PPPXPXLGXXXLXHPXDXPXPPXPXXXXHLXPPPQDXP 919
           PPP P         P   P PP P       PPP   P
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,870,777
Number of Sequences: 59808
Number of extensions: 100412
Number of successful extensions: 349
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 3751632030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)