Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_N18
         (1005 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.38 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.88 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   1.2  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   2.4  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   4.7  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   6.2  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   6.2  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   6.2  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 0.38
 Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
 Frame = +3

Query: 855 PXPXPXXXPPPPXXPXXXXPG--PGXXPXXXGXXXXPXPPXPXXPPPPXP 998
           P P     P  P  P    PG  PG  P          PP    PPP  P
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRP 268



 Score = 23.8 bits (49), Expect = 8.2
 Identities = 13/40 (32%), Positives = 13/40 (32%), Gaps = 2/40 (5%)
 Frame = +3

Query: 879 PPPPXXPXXXXPGPGXXPXXXGXXXXPXPPXP--XXPPPP 992
           P  P  P    P     P   G    P PP P    P PP
Sbjct: 183 PGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPP 222


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 27.1 bits (57), Expect = 0.88
 Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 5/60 (8%)
 Frame = +3

Query: 828 KXXPXTKLSPXPXPXXXPPPPXXPXXXXPG-----PGXXPXXXGXXXXPXPPXPXXPPPP 992
           K  P    +  P P    PPP       PG     PG  P   G      PP     PPP
Sbjct: 61  KIAPNPFTAGPPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -3

Query: 922 PGPGXXXXGXXGGGGXXXGXGXGXSLVXG 836
           PG G    G  GGGG     G G S + G
Sbjct: 650 PGSGGGGGGGGGGGGSVGSGGIGSSSLGG 678



 Score = 26.2 bits (55), Expect = 1.5
 Identities = 14/40 (35%), Positives = 14/40 (35%)
 Frame = -3

Query: 997 GXGGGGXXGXGGXGXXXXPXXXGXXPGPGXXXXGXXGGGG 878
           G GGGG  G GG G            G G        GGG
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGG 690


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.2 bits (45), Expect(2) = 2.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 957 PXPPXPXXPPP 989
           P PP P  PPP
Sbjct: 585 PPPPPPMGPPP 595



 Score = 21.4 bits (43), Expect(2) = 2.4
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 861 PXPXXXPPPPXXP 899
           P P   PPPP  P
Sbjct: 581 PPPAPPPPPPMGP 593


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -3

Query: 922 PGPGXXXXGXXGGGGXXXGXGXG 854
           P PG    G  G GG   G G G
Sbjct: 89  PSPGAGGTGSGGSGGGSGGIGSG 111


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 24.2 bits (50), Expect = 6.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 68  TCHNSKCIPRXLLSAALLVCVNAQVSMPPGY 160
           TC N  CIP+ L+  A L+      S P G+
Sbjct: 83  TCVNVGCIPKKLMHQASLLGEAIHDSQPYGW 113


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 6.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 68  TCHNSKCIPRXLLSAALLVCVNAQVSMPPGY 160
           TC N  CIP+ L+  A L+      S P G+
Sbjct: 59  TCVNVGCIPKKLMHQASLLGEAIHDSQPYGW 89


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 6.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 68  TCHNSKCIPRXLLSAALLVCVNAQVSMPPGY 160
           TC N  CIP+ L+  A L+      S P G+
Sbjct: 56  TCVNVGCIPKKLMHQASLLGEAIHDSQPYGW 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,425
Number of Sequences: 2352
Number of extensions: 15013
Number of successful extensions: 45
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 110585631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)