Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N17
(1005 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.009
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.11
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.11
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.15
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.15
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.19
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.26
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.8
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.2
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 7.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 9.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.009
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 909 PXPXPXXX-PPXPPXPPXXXXXXPXPXPPPP 998
P P P PP PP PP P P PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 33.5 bits (73), Expect = 0.048
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +2
Query: 881 PXPQPXXXXPLPXPXXXPXX---PPXPPXPXXXXXSPXXPPPP 1000
P P P P+P P P PP PP P P PPPP
Sbjct: 742 PTPAPA---PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.1 bits (72), Expect = 0.063
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 909 PXPXPXXXPPXPPXPPXXXXXXPXPXPPPP 998
P P PP PP P P P PPPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.26
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 881 PXPQPXXXXPLPXPXXXPXXPPXPPXPXXXXXSPXXPPPP 1000
P P P P P PP PP P PPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = +1
Query: 535 PXKXXVXXRPPKGQDPXXRPRRWXFSXXPPPPXRASXKSXPPPPXXPTP 681
P + P P P PPPP + PPPP P P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/52 (26%), Positives = 18/52 (34%)
Frame = +1
Query: 811 PTPXQVPLVXPXRAPXXLLHLXPTXPTTXXXXXPXXXPXXXXXXPPXPXPXP 966
P P ++ P AP + + P P P P PP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.11
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 921 PXXXPPXPPXPPXXXXXXPXPXPPPP 998
P PP PP PP P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 932 PXXPPXPPXPXXXXXSPXXPPPP 1000
P PP PP P PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 941 PPXPPXPXXXXXSPXXPPPP 1000
PP PP P S PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 619 PPPPXRASXKSXPPPPXXP 675
PPPP S PPPP P
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 932 PXXPPXPPXPXXXXXSPXXPPPP 1000
P P PP P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
Frame = +1
Query: 943 PPXPXPXPX---PXLXPXPPPPXH 1005
PP P P P P P PPPP +
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGY 32
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.11
Identities = 36/149 (24%), Positives = 38/149 (25%), Gaps = 4/149 (2%)
Frame = +1
Query: 559 RPPKGQDPXXRPRRWXFSXXPPPPXRASXKSXPPPPXXPTPRQXLXXXXXXXXXXXXXXX 738
RPP P R R PP +S S PPPP P PR
Sbjct: 310 RPPPPPPPSRRNR-----GKPPIGNGSSNSSLPPPP--PPPRSNAAGSIPLPPQGRSAPP 362
Query: 739 XXXSRXCRFTGIPVXPLPXXXXAXPTPXQVPLV----XPXRAPXXLLHLXPTXPTTXXXX 906
R TG PL P P + P P T P
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 907 XPXXXPXXXXXXPPXPXPXPXPXLXPXPP 993
P P P P P P PP
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 29.1 bits (62), Expect = 1.0
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 894 PXXXXPXPXPXXXPPXPPXPPXXXXXXPXPXPPP 995
P P P P PP PP P P P P
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 28.3 bits (60), Expect = 1.8
Identities = 27/126 (21%), Positives = 30/126 (23%), Gaps = 1/126 (0%)
Frame = +1
Query: 619 PPPPXRASXKSXPPPPXXPTPRQXLXXXXXXXXXXXXXXXXXXSRXCRFTGIPVXPLPXX 798
PPPP A PPP + T P P P
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 799 XXAXPTPXQVPLVXPXRAPXXLLHLXPTXPTTXXXXX-PXXXPXXXXXXPPXPXPXPXPX 975
P +P P P P P+ P P P P P P P
Sbjct: 423 LPPS-APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPA 481
Query: 976 LXPXPP 993
P P
Sbjct: 482 PAPAAP 487
Score = 27.1 bits (57), Expect = 4.2
Identities = 30/138 (21%), Positives = 35/138 (25%)
Frame = +1
Query: 580 PXXRPRRWXFSXXPPPPXRASXKSXPPPPXXPTPRQXLXXXXXXXXXXXXXXXXXXSRXC 759
P PR P PP S + PPPP P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRS--APPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 760 RFTGIPVXPLPXXXXAXPTPXQVPLVXPXRAPXXLLHLXPTXPTTXXXXXPXXXPXXXXX 939
+ + PL P P P AP L P+ P + P P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSL---PPSAPPSLPMGAPAAPPLPPSA 453
Query: 940 XPPXPXPXPXPXLXPXPP 993
P P P P PP
Sbjct: 454 PIAPPLPAGMPAAPPLPP 471
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.15
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 887 PQPXXXXPLPXPXXXPXXPPXPPXPXXXXXSPXXPPPPL 1003
PQ P P P P P PP P P PPPPL
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMP---AGPPSAPPPPL 1735
Score = 31.1 bits (67), Expect = 0.26
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 909 PXPXPXXXPPXPPXPPXXXXXXPXPXPPPPXS 1004
P P P PP P PP P PP P S
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +2
Query: 881 PXPQPXXXXPLPXPXXXPXXPP-XPPXPXXXXXSPXXPPP 997
P P P P P P PP PP P +P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.15
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 996 GGGXXGEXXXXXGXGGWGGXXGXXXGXGRGXXXXGCG 886
GG G G GG+GG G G GRG G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.5 bits (68), Expect = 0.19
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 996 GGGXXGEXXXXXGXGGWGGXXGXXXGXGRG 907
GGG G G GG+GG G G GRG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.26
Identities = 19/72 (26%), Positives = 22/72 (30%)
Frame = +1
Query: 775 PVXPLPXXXXAXPTPXQVPLVXPXRAPXXLLHLXPTXPTTXXXXXPXXXPXXXXXXPPXP 954
P P P+P P + P +AP L P P P PP P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPI-PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 955 XPXPXPXLXPXP 990
P P L P
Sbjct: 199 PKVPPPPLSQAP 210
Score = 27.5 bits (58), Expect = 3.2
Identities = 22/80 (27%), Positives = 22/80 (27%), Gaps = 5/80 (6%)
Frame = +3
Query: 780 PPSPLXXXRLXYPTXGPPRXXXXXXXXXXXXXXDLAHNPXXXX-PXPX----PXXXPPXP 944
P P L PT PPR P P P P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 945 PXPPXXXXXXPXPXPPPPXS 1004
P P P PPPP S
Sbjct: 188 PSLPSAVPPMPPKVPPPPLS 207
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 887 PQPXXXXPLPXPXXXPXXPPXPPXPXXXXXSPXXPPPPL 1003
PQ P P P P PP P SP PP PL
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPP-PVRSSISPSMPPAPL 762
Score = 25.8 bits (54), Expect = 9.6
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 943 PPXPXPXPXPXLXPXPPPP 999
P P P P P + PPPP
Sbjct: 729 PAPPTPAPTPAVKHHPPPP 747
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 580 PXXRPRRWXFSXXPPPPXRASXKSXPPPP 666
P RP PPPP R + S PPP
Sbjct: 126 PGSRPSVLNQEQVPPPPVRPNVMSQMPPP 154
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -1
Query: 996 GGGXXGEXXXXXGXGGWGGXXGXXXGXGRGXXXXGCGXG 880
GGG G G GG+GG G G G G G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHG-GHGGFGGGPG 231
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 5/44 (11%)
Frame = +2
Query: 881 PXPQPXXXXPLPXPXXXPXXPP-----XPPXPXXXXXSPXXPPP 997
P P P P+P P P PP P P PPP
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,928,503
Number of Sequences: 5004
Number of extensions: 24301
Number of successful extensions: 290
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 521265546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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