Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_N17
         (1005 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.38 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.7  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   4.7  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 0.38
 Identities = 20/79 (25%), Positives = 25/79 (31%), Gaps = 6/79 (7%)
 Frame = +1

Query: 766 TGIPVXPLPXXXXAX-PTPXQVPL-----VXPXRAPXXLLHLXPTXPTTXXXXXPXXXPX 927
           TG P  P P       P P  VP+     + P   P     + P  P+      P     
Sbjct: 203 TGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQ 262

Query: 928 XXXXXPPXPXPXPXPXLXP 984
                PP P   P P + P
Sbjct: 263 PPPIRPPNPMGGPRPQISP 281


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 20/77 (25%), Positives = 22/77 (28%)
 Frame = +1

Query: 766 TGIPVXPLPXXXXAXPTPXQVPLVXPXRAPXXLLHLXPTXPTTXXXXXPXXXPXXXXXXP 945
           TG P+ P P            P   P           P  P       P   P      P
Sbjct: 524 TGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRF--PAGFPNLPNAQP 581

Query: 946 PXPXPXPXPXLXPXPPP 996
           P P P P P + P P P
Sbjct: 582 P-PAPPPPPPMGPPPSP 597


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = -1

Query: 999 GGGGXXGEXXXXXGXGGWGGXXGXXXGXGRGXXXXGCGXG 880
           GG G   +     G GG GG  G   G GRG      G G
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGG-RGRGRGRGGRDGGGG 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,988
Number of Sequences: 2352
Number of extensions: 7620
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 110585631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)