Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N16
(929 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 113 6e-24
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 100 6e-20
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 100 1e-19
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 100 1e-19
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 97 7e-19
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 91 3e-17
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 85 3e-15
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 81 4e-14
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 81 5e-14
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 80 7e-14
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 79 1e-13
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 78 3e-13
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 78 4e-13
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 77 9e-13
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 77 9e-13
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 75 3e-12
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 74 5e-12
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 74 5e-12
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 71 4e-11
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 68 4e-10
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 68 4e-10
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 67 7e-10
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 65 3e-09
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 62 3e-08
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 61 5e-08
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 59 1e-07
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 56 1e-06
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 53 1e-05
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 52 3e-05
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 49 1e-04
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 45 0.002
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 41 0.039
UniRef50_Q5ANI0 Cluster: Potential fungal zinc cluster transcrip... 38 0.48
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 113 bits (272), Expect = 6e-24
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
WFY R A+ RH+Y+R GV ++TKI+GGR+RNGV PSHF R S +AR+ LQ+LE LK
Sbjct: 52 WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
+VEK QDGGR LT QG+RDL++
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDR 133
Score = 60.5 bits (140), Expect = 6e-08
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +1
Query: 73 MRSVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
M VTVKDV Q V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 47
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 100 bits (239), Expect = 6e-20
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
WFYVRCAAILRH+YIR P G+ + K F +KRNGV PSH + G + RKA+Q +EAL
Sbjct: 52 WFYVRCAAILRHLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVIRKAIQQMEALG 110
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
L +K + GGR LT+ GRRDL++
Sbjct: 111 LCQKREGGGRSLTSAGRRDLDR 132
Score = 49.6 bits (113), Expect = 1e-04
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +1
Query: 73 MRSVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
M V+VKDV+ VK +A LKKTGKV++P+ D+VK + +LAP P
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNP 50
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 99.5 bits (237), Expect = 1e-19
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+SSG I+R LQ L+ +
Sbjct: 75 WYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMG 134
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
+++ GGR++T+QGRRDL+Q
Sbjct: 135 IIDVDPKGGRLITSQGRRDLDQ 156
Score = 40.3 bits (90), Expect = 0.069
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 20/66 (30%)
Frame = +1
Query: 85 TVKDVEQDXIVKTVAAHLKKTGKV--------------------KVPEXMDLVKTARFKE 204
TVKDV VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 205 LAPX*P 222
L P P
Sbjct: 68 LPPYDP 73
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 99.5 bits (237), Expect = 1e-19
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+SSG I+R LQ L+ +
Sbjct: 55 WYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMG 114
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
+++ GGR++T+QGRRDL+Q
Sbjct: 115 IIDVDPKGGRLITSQGRRDLDQ 136
Score = 60.1 bits (139), Expect = 8e-08
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 85 TVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
TVKDV VK +AHLK++GK+++PE +D+VKTARFKEL P P
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDP 53
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 96.7 bits (230), Expect = 7e-19
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+YVR A++ R +YIRSP GV + +++G KR GVTP+HF ++SG + RKALQ+LEA+K
Sbjct: 53 WYYVRTASVARRLYIRSPTGVGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLEAIK 112
Query: 408 LVEKVQDG-GRILT 446
VEK DG GRILT
Sbjct: 113 WVEKHPDGNGRILT 126
Score = 48.4 bits (110), Expect = 3e-04
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1
Query: 97 VEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
++Q IV+ +A LKK+GKVKVPE DLVK KELAP
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAP 48
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 91.5 bits (217), Expect = 3e-17
Identities = 40/82 (48%), Positives = 57/82 (69%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+YVR AAI RHIY+R VGV + K++GG G+ PSH SG + RK +QSLE +
Sbjct: 52 WYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIG 111
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
++EK +GGR ++ QG+RDL++
Sbjct: 112 VLEKSDNGGRRISQQGQRDLDR 133
Score = 50.4 bits (115), Expect = 6e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 73 MRSVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
M V+VKDV+ + AA LK++GK+ P+ +D+VKT KELAP P
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDP 50
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 84.6 bits (200), Expect = 3e-15
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+Y R A+ILR +YI PVG++ + +GGRK G P F ++ G I RKALQ LEA
Sbjct: 50 WWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAG 109
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
+EKV GR++T +GR L++
Sbjct: 110 FIEKVPGKGRVVTPKGRSFLDK 131
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 81.0 bits (191), Expect = 4e-14
Identities = 37/86 (43%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+Y+R A+I R +Y+R GV ++ K++GG R GV HF ++SG + R LQ LE +K
Sbjct: 61 WYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQKASGGLIRHILQQLEEMK 120
Query: 408 LVEK----VQDGGRILTTQGRRDLEQ 473
+VEK V GGR +T+ G++DL++
Sbjct: 121 VVEKCPEGVNKGGRKITSHGQQDLDR 146
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +1
Query: 73 MRSVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
+R VTV+DV+ +K A HLK++GK+++P D+VKTA FKE +P P
Sbjct: 10 VRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADP 59
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 80.6 bits (190), Expect = 5e-14
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+YVR AA+ RHIY+R VGV + K+ G K G P+H +SG + RK +QSLE +
Sbjct: 126 WYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDASGSVDRKIIQSLEKIG 185
Query: 408 LVEKVQD-GGRILTTQGRRDLEQ 473
++E ++ GGR +T G+RDL++
Sbjct: 186 VLEYDEEKGGRRITQAGQRDLDR 208
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 80.2 bits (189), Expect = 7e-14
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+YVR AA+LR +YI PVGV ++ +GG+K G P F R SG I R+ALQ LE
Sbjct: 50 WWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESG 109
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
L+++ ++ GR++T +GR L++
Sbjct: 110 LIKR-EENGRVITPEGRSFLDK 130
Score = 40.3 bits (90), Expect = 0.069
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +1
Query: 85 TVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
TV DV D ++ VA LK KVK PE ++ VKT KE P P
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENP 48
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 79.4 bits (187), Expect = 1e-13
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W Y R A + R +YIR GV T ++FGG +RNGV P+HF +G R L+ L+ LK
Sbjct: 54 WIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLK 113
Query: 408 LVE-KVQDGGRILTTQGRRDLEQ 473
++E GGR +T GRRDL++
Sbjct: 114 VIETDAVKGGRTITATGRRDLDR 136
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +1
Query: 79 SVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
+VT+KDV + T A LKKTG+V++P+ D+ KTA ++EL P P
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNP 52
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 78.2 bits (184), Expect = 3e-13
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+Y+R A+ILR +Y+ PVGV + +GGR+ G P F + SG I RK LQ LE
Sbjct: 50 WWYMRAASILRRVYMDGPVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEAG 109
Query: 408 LVEKVQDGGRILTTQGR 458
LVEK ++ GR++T +GR
Sbjct: 110 LVEKTEE-GRVVTPEGR 125
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 77.8 bits (183), Expect = 4e-13
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+Y+R A+I R +YI PVG++ + +GGRKR G P F + SG I R AL LE L
Sbjct: 48 WWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLG 107
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
V+K ++ GR++T GR L++
Sbjct: 108 FVKKTRE-GRVVTPMGRSFLDK 128
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 76.6 bits (180), Expect = 9e-13
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W Y+R A+I R +YIR +G KI+G RKR G+ P +SSG + R +LQ LE L
Sbjct: 59 WLYIRIASIARKLYIRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEKLG 118
Query: 408 LVEKVQDGGRILTTQGRRDLE 470
+ EK + GGR +T++G+ +++
Sbjct: 119 VAEKDERGGRRITSKGQSEMD 139
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 85 TVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
TVKDV V T A+HLK+ G +++P +D +KTA +ELAP P
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDP 57
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 76.6 bits (180), Expect = 9e-13
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
WFY+R AA+LRH+Y GV + K++ +KRNG P+H CR+SG I R +Q LE++
Sbjct: 74 WFYIRAAAVLRHLYFHPDSGVDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLESIG 133
Query: 408 LVEK-VQDGGRILTTQG 455
+E+ ++ GR L+ +G
Sbjct: 134 FLEQDLKKHGRRLSRKG 150
Score = 41.1 bits (92), Expect = 0.039
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 79 SVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
+ ++KD D VK A H+K G ++ P+ +D KT+ KELAP P
Sbjct: 25 NTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDP 72
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIR-SPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEAL 404
W+YVR A+ILR +Y P+G++T I+GGR+ G P HF ++ G + RK LQ LE
Sbjct: 51 WWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEA 110
Query: 405 KLVEKVQDGGRILTTQGRRDLE 470
LV KV GR ++ GR L+
Sbjct: 111 GLVVKVPGRGRTISPAGRSLLD 132
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 74.1 bits (174), Expect = 5e-12
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
WFY+R AAILRH+Y G+ + +++ RKR G P+H C +SG I R +Q LEA
Sbjct: 74 WFYIRSAAILRHLYFHPDEGIGRLRRVYASRKRRGCAPNHTCPASGKIIRTIVQQLEANG 133
Query: 408 LVEKVQDG-GRILTTQG 455
+EK +D GR L+ +G
Sbjct: 134 FLEKSKDNKGRRLSRRG 150
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 74.1 bits (174), Expect = 5e-12
Identities = 32/82 (39%), Positives = 52/82 (63%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W++ RCA+I+R IY+ P+G+ + K +GG K +G +H + G I R A+ LE L
Sbjct: 49 WWHTRCASIMRKIYLHGPIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLG 108
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
+EKV+ GRI++ QG + L++
Sbjct: 109 YLEKVEKKGRIVSKQGMQKLDR 130
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 70.9 bits (166), Expect = 4e-11
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W Y+R A+ILRH+Y+R VGV ++K +G ++RNG +H +S I R L L++L
Sbjct: 65 WLYIRAASILRHLYVRPNVGVGALSKFYGRKQRNGTARNHSAVASRGIIRYCLIQLQSLG 124
Query: 408 LVE-KVQDGGRILTTQGRRDLE 470
LVE G R L+ QG+R+L+
Sbjct: 125 LVEFNPNTGTRRLSPQGQRELD 146
Score = 43.2 bits (97), Expect = 0.010
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 85 TVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
T KDV +++ A LKK GK+ +PE +D VKTA KEL P
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPP 60
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 67.7 bits (158), Expect = 4e-10
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W++ RCA+++R IY+ P+G+ + +GG K G ++ ++ G I R A+ LE L
Sbjct: 43 WWHTRCASLMRKIYLHGPIGINGLRSEYGGGKPRGYGAANHRKAGGAIIRNAVHGLEKLG 102
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
+EK+ GRI++ QG + L++
Sbjct: 103 YIEKLDKKGRIVSRQGMQKLDR 124
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 67.7 bits (158), Expect = 4e-10
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W Y+R AAI R +Y+ + +GV + + +G + PSH SG + R LQ LE +
Sbjct: 53 WIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMG 112
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
+V K+Q GR LT +GR+D+++
Sbjct: 113 IVGKIQ-SGRSLTKEGRKDMDK 133
Score = 50.4 bits (115), Expect = 6e-05
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +1
Query: 88 VKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
+KDV +K A HLKK+GK+++PE +D VKT KELAP P
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNP 51
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 66.9 bits (156), Expect = 7e-10
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W++ R AA+LR +Y+ P+GV+ + +GG K G P+ F + SG + RKALQ LEA
Sbjct: 50 WWFTRAAAVLRRVYVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSGSVLRKALQQLEAAG 109
Query: 408 LVEKVQDGGRI 440
L+ + G ++
Sbjct: 110 LIVHDKTGRKV 120
Score = 35.9 bits (79), Expect = 1.5
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 85 TVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
TV DV D +++ VA LKK ++K P KT KE+ P P
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDP 48
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 64.9 bits (151), Expect = 3e-09
Identities = 36/91 (39%), Positives = 48/91 (52%)
Frame = +3
Query: 189 SSLQRAGSXMTLXWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGX 368
SS R + W+Y+RCAA+LR IY+R VG ++K FG +K G P H SS
Sbjct: 64 SSHGRERAPQNPDWYYIRCAAVLRAIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTG 123
Query: 369 IARKALQSLEALKLVEKVQDGGRILTTQGRR 461
A +SL L LVE G+ LT +G +
Sbjct: 124 PLHWACKSLTKLGLVEPGAQSGQRLTRKGHK 154
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +1
Query: 67 GKMRSVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
GK + T+KDV +KT A H K+ GK+ VP +++K++ +E AP P
Sbjct: 24 GKRKGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNP 75
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 61.7 bits (143), Expect = 3e-08
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W++++ ++ILR +YI +GV + + F ++R GV P+H +SG I R LQ LE +
Sbjct: 96 WYFIKTSSILRRLYIHPDIGVGFLRRQFSYKQRRGVAPNHTSLASGKILRSILQQLENIG 155
Query: 408 LVEK-VQDGGRILTTQG 455
VE+ + GR LTT+G
Sbjct: 156 YVEQNPKKKGRRLTTKG 172
Score = 34.7 bits (76), Expect = 3.4
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 88 VKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
+KDV+ + + A +LK K+ P+ + VKT + ++LAP
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAP 91
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 60.9 bits (141), Expect = 5e-08
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Frame = +3
Query: 135 LKKNGQSQGT*AHGSCKDSSLQRAGSXMTLXWFYVRCAAILRHIYIRSPVGVKTVTKIFG 314
LKKN + + S + L + S + W YVR AA+ R IY+R GV +T +FG
Sbjct: 74 LKKNNKIKIP-EWASIVKTGLGKETSPIDQDWMYVRAAALARKIYVRGHWGVGNLTHMFG 132
Query: 315 GRKRNGVTPSHFCRSSGXIARKALQSLEALKLVEK-----VQDGGRILTTQGRRDLEQ 473
NG S SG + R LQ LE +K+++K ++ G RI+T +G++DL +
Sbjct: 133 SVNDNGKHES----GSGKVIRYLLQQLETIKVLKKDNKSLLKKGSRIVTKEGQQDLNR 186
Score = 42.7 bits (96), Expect = 0.013
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 85 TVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
TVKDV ++ A +LKK K+K+PE +VKT KE +P
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSP 99
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +3
Query: 324 RNGVTPSHFCRSSGXIARKALQSLEALKLVEKVQDGGRILTTQGRRDLEQ 473
R+ V PSHF R S A + LQ+LE LK+VEK QDGGR L QG+RDL++
Sbjct: 207 RHRVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDR 256
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1
Query: 103 QDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
Q V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 192
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 56.4 bits (130), Expect = 1e-06
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +3
Query: 189 SSLQRAGSXMTLXWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGX 368
+S+ R + W Y+R AA+ R +Y++ G+ T+ IFG K G + G
Sbjct: 43 TSVARELAPQDSDWVYIRTAALARKVYLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGK 102
Query: 369 IARKALQSLEALKLVEKVQDG-----GRILTTQGRRDLEQ 473
I R AL+SLE LK++ K ++ R++T +G +L +
Sbjct: 103 ILRWALKSLEDLKIIRKDKNSATKKFSRVITKEGMTELNR 142
Score = 39.5 bits (88), Expect = 0.12
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 85 TVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
TVKDV ++ A+HLKK K+ +PE T+ +ELAP
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAP 51
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 52.8 bits (121), Expect = 1e-05
Identities = 28/76 (36%), Positives = 40/76 (52%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W YVR A++LR +YI +G+ ++ +GG+ G H S I R LE+
Sbjct: 50 WIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESAG 109
Query: 408 LVEKVQDGGRILTTQG 455
LV+K Q GR L+ QG
Sbjct: 110 LVQKTQK-GRSLSPQG 124
Score = 33.5 bits (73), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 82 VTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
V+VK V D ++ V+ LK+ K+K P + VKT KE P
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPP 45
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 51.6 bits (118), Expect = 3e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
W+Y+R AA+ R IY+ + + +G + P H +S + R LQ LE
Sbjct: 59 WWYIRAAAVTRQIYLHHDASLSGLAFHYGANMKAVTMPKHHHEASRKVIRTILQQLEKAG 118
Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
LV +V + GR LT +G++ L+Q
Sbjct: 119 LV-RVAEKGRQLTPKGQKLLDQ 139
Score = 39.9 bits (89), Expect = 0.091
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 91 KDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
+++ D +V +A H + T ++ PE DLVKTA K+LAP
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAP 54
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/112 (26%), Positives = 59/112 (52%)
Frame = +3
Query: 135 LKKNGQSQGT*AHGSCKDSSLQRAGSXMTLXWFYVRCAAILRHIYIRSPVGVKTVTKIFG 314
L+K+GQ CK SSL++ + W + R A+I+ YI +G + + +I+
Sbjct: 21 LEKSGQINIPSWIEICKSSSLKKYSPNQS-NWIFKRMASIIIKFYIYKKLGTRQLVRIYN 79
Query: 315 GRKRNGVTPSHFCRSSGXIARKALQSLEALKLVEKVQDGGRILTTQGRRDLE 470
G+K+ S SG I R +++ LE +K+++K + G L+ + + +++
Sbjct: 80 GKKKG--RRSKKTNGSGKIIRFSIKELEKMKILKKDESGRFGLSKKAQNEID 129
Score = 34.3 bits (75), Expect = 4.5
Identities = 11/42 (26%), Positives = 27/42 (64%)
Frame = +1
Query: 88 VKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSP 46
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 315 GRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
GR+RNGV PSHF R S +AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 41.1 bits (92), Expect = 0.039
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN----GVTPSHFCRSSGXIARKALQSL 395
++YVR A++LR + P+G++ + +G +KR V P S + R +LQ+L
Sbjct: 60 FWYVRSASLLRKVAQNEPIGIERLATEYGSKKRGSNRYSVRPGEHEGGSRKLIRASLQAL 119
Query: 396 EALKLVEKVQDGGRILTTQGRRDLEQ 473
E LV GR ++ G L +
Sbjct: 120 EEDGLVTTAAGEGRRISDDGEAFLSE 145
>UniRef50_Q5ANI0 Cluster: Potential fungal zinc cluster
transcription factor; n=1; Candida albicans|Rep:
Potential fungal zinc cluster transcription factor -
Candida albicans (Yeast)
Length = 1130
Score = 37.5 bits (83), Expect = 0.48
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = +1
Query: 703 PPPPPXPXRXXXXXXYXXXPSGXPLXXPATXXXXGKHHXXPXHIXLFSLFPPXPGAXSXX 882
PPPPP P Y P P P HH P H F PP PG
Sbjct: 289 PPPPPPPHPDHLHHQYYGYPPPPP--PPPPPPLHHHHHYPPSHHPGFGFPPPPPGPPGP- 345
Query: 883 XFPXXXXXPPP 915
P PPP
Sbjct: 346 --PGPPPVPPP 354
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,676,080
Number of Sequences: 1657284
Number of extensions: 10311366
Number of successful extensions: 41570
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 25199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37922
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85670899699
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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