Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_N16
         (929 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0129 + 17520753-17520842,17521651-17521741,17521887-175220...   100   3e-21

>03_04_0129 +
           17520753-17520842,17521651-17521741,17521887-17522070,
           17522149-17522224
          Length = 146

 Score = 99.5 bits (237), Expect = 3e-21
 Identities = 42/82 (51%), Positives = 59/82 (71%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
           W+Y R A+I R IY+R  +GV    KI+GGR+RNG  P HFC+SSG I+R  LQ L+ + 
Sbjct: 55  WYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMG 114

Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
           +++    GGR++T+QGRRDL+Q
Sbjct: 115 IIDVDPKGGRLITSQGRRDLDQ 136



 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +1

Query: 85  TVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAPX*P 222
           TVKDV     VK  +AHLK++GK+++PE +D+VKTARFKEL P  P
Sbjct: 8   TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDP 53


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,637,869
Number of Sequences: 37544
Number of extensions: 349732
Number of successful extensions: 2678
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2431
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)