Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_N16
         (929 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein pro...   113   9e-25
BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19 p...   113   9e-25
BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19 p...   113   9e-25
BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19 p...   113   9e-25
BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19 p...   113   9e-25
AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19 p...   113   9e-25

>M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein
           protein.
          Length = 145

 Score =  113 bits (272), Expect = 9e-25
 Identities = 50/82 (60%), Positives = 64/82 (78%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
           WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S  +AR+ LQ+LE LK
Sbjct: 52  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111

Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
           +VEK QDGGR LT QG+RDL++
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDR 133



 Score = 60.5 bits (140), Expect = 9e-09
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = +1

Query: 73  MRSVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
           M  VTVKDV Q   V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 47


>BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  113 bits (272), Expect = 9e-25
 Identities = 50/82 (60%), Positives = 64/82 (78%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
           WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S  +AR+ LQ+LE LK
Sbjct: 52  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111

Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
           +VEK QDGGR LT QG+RDL++
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDR 133



 Score = 60.5 bits (140), Expect = 9e-09
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = +1

Query: 73  MRSVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
           M  VTVKDV Q   V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 47


>BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19
           protein.
          Length = 157

 Score =  113 bits (272), Expect = 9e-25
 Identities = 50/82 (60%), Positives = 64/82 (78%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
           WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S  +AR+ LQ+LE LK
Sbjct: 64  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 123

Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
           +VEK QDGGR LT QG+RDL++
Sbjct: 124 MVEKDQDGGRKLTPQGQRDLDR 145



 Score = 59.3 bits (137), Expect = 2e-08
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +1

Query: 82  VTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
           VTVKDV Q   V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 16  VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 59


>BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  113 bits (272), Expect = 9e-25
 Identities = 50/82 (60%), Positives = 64/82 (78%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
           WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S  +AR+ LQ+LE LK
Sbjct: 52  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111

Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
           +VEK QDGGR LT QG+RDL++
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDR 133



 Score = 60.5 bits (140), Expect = 9e-09
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = +1

Query: 73  MRSVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
           M  VTVKDV Q   V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 47


>BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  113 bits (272), Expect = 9e-25
 Identities = 50/82 (60%), Positives = 64/82 (78%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
           WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S  +AR+ LQ+LE LK
Sbjct: 52  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111

Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
           +VEK QDGGR LT QG+RDL++
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDR 133



 Score = 60.5 bits (140), Expect = 9e-09
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = +1

Query: 73  MRSVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
           M  VTVKDV Q   V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 47


>AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  113 bits (272), Expect = 9e-25
 Identities = 50/82 (60%), Positives = 64/82 (78%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGXIARKALQSLEALK 407
           WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S  +AR+ LQ+LE LK
Sbjct: 52  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111

Query: 408 LVEKVQDGGRILTTQGRRDLEQ 473
           +VEK QDGGR LT QG+RDL++
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDR 133



 Score = 60.5 bits (140), Expect = 9e-09
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = +1

Query: 73  MRSVTVKDVEQDXIVKTVAAHLKKTGKVKVPEXMDLVKTARFKELAP 213
           M  VTVKDV Q   V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,926,989
Number of Sequences: 237096
Number of extensions: 1823121
Number of successful extensions: 8043
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7083
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)