Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N14
(845 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.027
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.084
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.084
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.084
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 34 0.11
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.34
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.34
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 32 0.45
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.59
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.59
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.59
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.59
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 0.78
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 31 0.78
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 1.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 1.8
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 30 1.8
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 30 1.8
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 30 1.8
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.1
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 4.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 5.5
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 7.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 28 9.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.6
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = -3
Query: 711 GXGXWXGKGXXXXXXXXXXXXWGPXXY*GGXSXRGXXPQXGGXXXGXAXGGXXXGGGGXX 532
G W G WG G G GG G GG GGGG
Sbjct: 51 GGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGG 110
Query: 531 KXGGXXGG 508
+ GG GG
Sbjct: 111 RGGGGGGG 118
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 647 GGPXXIRGGTLRGXGPXXXGGXXKGGXXGXXXGGG 543
GG RGG G G GG +GG G GGG
Sbjct: 98 GGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -1
Query: 626 GGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGG 519
GG RG G GG +GG G GGGG GG
Sbjct: 90 GGGGRGGG--GGGGGGRGGGGGGRGGGGGGGGGRGG 123
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 629 RGGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGG 519
RGG G G GG +GG G G GG GG
Sbjct: 94 RGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGG 130
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.084
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = +2
Query: 485 PKKRGXXXPPXXPPXXXXPPPPXXX---PPXAX-PXXXPPXXGXXPLXEXPP 628
P G PP PP PPPP PP P PP G P+ PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 521 PPXXXXPPPPXXXPP-XAXPXXXPPXXGXXPLXEXPP 628
PP PPPP PP P PP G P+ PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
PP PP PP PP P PP G P PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 31.9 bits (69), Expect = 0.59
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPP 592
PP PP PPPP PP PP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
P PP PPPP P P PP G PP
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 539 PPPPXXXPPXAX-PXXXPPXXGXXPLXEXPP 628
PPPP PP + P PP G P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 4/32 (12%)
Frame = +2
Query: 509 PPXXPPXXXXP----PPPXXXPPXAXPXXXPP 592
PP PP P PPP PP P PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.084
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = +2
Query: 485 PKKRGXXXPPXXPPXXXXPPPPXXX---PPXAX-PXXXPPXXGXXPLXEXPP 628
P G PP PP PPPP PP P PP G P+ PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 521 PPXXXXPPPPXXXPP-XAXPXXXPPXXGXXPLXEXPP 628
PP PPPP PP P PP G P+ PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
PP PP PP PP P PP G P PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 31.9 bits (69), Expect = 0.59
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPP 592
PP PP PPPP PP PP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
P PP PPPP P P PP G PP
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 539 PPPPXXXPPXAX-PXXXPPXXGXXPLXEXPP 628
PPPP PP + P PP G P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 4/32 (12%)
Frame = +2
Query: 509 PPXXPPXXXXP----PPPXXXPPXAXPXXXPP 592
PP PP P PPP PP P PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.084
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = +2
Query: 485 PKKRGXXXPPXXPPXXXXPPPPXXX---PPXAX-PXXXPPXXGXXPLXEXPP 628
P G PP PP PPPP PP P PP G P+ PP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 521 PPXXXXPPPPXXXPP-XAXPXXXPPXXGXXPLXEXPP 628
PP PPPP PP P PP G P+ PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 326
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
PP PP PP PP P PP G P PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 31.9 bits (69), Expect = 0.59
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPP 592
PP PP PPPP PP PP
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
P PP PPPP P P PP G PP
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 539 PPPPXXXPPXAX-PXXXPPXXGXXPLXEXPP 628
PPPP PP + P PP G P PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 4/32 (12%)
Frame = +2
Query: 509 PPXXPPXXXXP----PPPXXXPPXAXPXXXPP 592
PP PP P PPP PP P PP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
PP PP PP P PP P PP P PP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
P PP PPPP PP P PP P P
Sbjct: 53 PQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAP 92
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +2
Query: 509 PPXXPPXXXXPPP--PXXXPPXAXPXXXPP 592
PP PP PPP P PP P PP
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/88 (28%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +2
Query: 368 NFXGEPXXXXPXX-CPPFFSXXXXKXPXXXGXFX*XXXXXPKKRGXXXPPXXPPXXXXPP 544
NF P P PP + + P G + P G PP P PP
Sbjct: 377 NFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPP 436
Query: 545 PPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
PP P A PP G P+ PP
Sbjct: 437 PPGG--PGA---YGPPPTGFPPVGAPPP 459
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = +3
Query: 522 PPXXXXPPPPXXXPPXPXLXXXPXXXGXXPSXSXPPNXXGAPXVSGGVACLXY*GPYPP 698
P PPPP P P G + + PP+ GAP GG Y GP PP
Sbjct: 361 PQSFGGPPPPVSSAPGNFAP--PPQSGPPGAFAPPPSAFGAPQGPGGPG--GY-GPPPP 414
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/70 (34%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = -3
Query: 711 GXGXWXGKGXXXXXXXXXXXXWGPXXY*GGXSXRGXXPQXGGXXXGXAXGGXXXG--GGG 538
G G W G G WG GG RG + GG G GG G GGG
Sbjct: 28 GPGRWGGWGGNRWGGGGGPGGWGNNG--GGGWGRGGG-RGGGDWGGNNGGGGNWGGNGGG 84
Query: 537 XXKXGGXXGG 508
GG GG
Sbjct: 85 RGDWGGNGGG 94
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 648 WGPXXY*GGXSXRGXXPQXGGXXXGXAXGGXXXGGGGXXKXGGXXGG 508
WGP + GG G G G GGGG + GG GG
Sbjct: 20 WGPGGWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGG 66
Score = 31.5 bits (68), Expect = 0.78
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = -3
Query: 711 GXGXWXGKGXXXXXXXXXXXXWGPXXY*GGXSXRGXXPQXGGXXXGXAXGGXXXGGGGXX 532
G G W G G WG GG + G GG GG GGGG
Sbjct: 84 GRGDWGGNGGGGRGGGGRGD-WGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRG 142
Query: 531 KXG 523
G
Sbjct: 143 GDG 145
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -1
Query: 647 GGPXXIRGGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGG 519
GG GG G G GG G G GGGG GG
Sbjct: 98 GGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGG 140
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/67 (25%), Positives = 18/67 (26%)
Frame = -3
Query: 711 GXGXWXGKGXXXXXXXXXXXXWGPXXY*GGXSXRGXXPQXGGXXXGXAXGGXXXGGGGXX 532
G W G G WG GG G G G G GG
Sbjct: 36 GGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGG 95
Query: 531 KXGGXXG 511
+ GG G
Sbjct: 96 RGGGGRG 102
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 629 RGGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGG 519
RGG RG GG G G GGGG GG
Sbjct: 141 RGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGG 177
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXP 625
PP P PPPP PP P PP P P
Sbjct: 56 PPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.59
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPP 592
PP PP PPPP PP PP
Sbjct: 716 PPAPPPPGVGPPPPQGIPPMGFDPNKPP 743
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
PP PP PP P P PP G P PP
Sbjct: 695 PPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPP 734
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = +2
Query: 485 PKKRGXXXPPXXPPXXXXPPPPXXX---PPXAX-PXXXPPXXGXXPLXEXPP 628
P R PP PP PPPP PP A P PP G P PP
Sbjct: 265 PPPRTGSPPP--PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/76 (25%), Positives = 19/76 (25%)
Frame = +2
Query: 383 PXXXXPXXCPPFFSXXXXKXPXXXGXFX*XXXXXPKKRGXXXPPXXPPXXXXPPPPXXXP 562
P P PP P G P PP P PPP P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 563 PXAXPXXXPPXXGXXP 610
P P P G P
Sbjct: 298 PPPPPPRGSPPTGSLP 313
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Frame = +3
Query: 522 PPXXXXPPPP--XXXPPXPXL---XXXPXXXGXXPSXS-XPPNXXGAPXVSG 659
PP PPPP PP P P G P+ S PP G+P +G
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = +2
Query: 485 PKKRGXXXPPXXPPXXXXPPPPXXX---PPXAX-PXXXPPXXGXXPLXEXPP 628
P R PP PP PPPP PP A P PP G P PP
Sbjct: 286 PPPRTGSPPP--PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/76 (25%), Positives = 19/76 (25%)
Frame = +2
Query: 383 PXXXXPXXCPPFFSXXXXKXPXXXGXFX*XXXXXPKKRGXXXPPXXPPXXXXPPPPXXXP 562
P P PP P G P PP P PPP P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 563 PXAXPXXXPPXXGXXP 610
P P P G P
Sbjct: 319 PPPPPPRGSPPTGSLP 334
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Frame = +3
Query: 522 PPXXXXPPPP--XXXPPXPXL---XXXPXXXGXXPSXS-XPPNXXGAPXVSG 659
PP PPPP PP P P G P+ S PP G+P +G
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = +2
Query: 485 PKKRGXXXPPXXPPXXXXPPPPXXX---PPXAX-PXXXPPXXGXXPLXEXPP 628
P R PP PP PPPP PP A P PP G P PP
Sbjct: 271 PPPRTGSPPP--PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/76 (25%), Positives = 19/76 (25%)
Frame = +2
Query: 383 PXXXXPXXCPPFFSXXXXKXPXXXGXFX*XXXXXPKKRGXXXPPXXPPXXXXPPPPXXXP 562
P P PP P G P PP P PPP P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 563 PXAXPXXXPPXXGXXP 610
P P P G P
Sbjct: 304 PPPPPPRGSPPTGSLP 319
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Frame = +3
Query: 522 PPXXXXPPPP--XXXPPXPXL---XXXPXXXGXXPSXS-XPPNXXGAPXVSG 659
PP PPPP PP P P G P+ S PP G+P +G
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.78
Identities = 34/147 (23%), Positives = 40/147 (27%), Gaps = 1/147 (0%)
Frame = +3
Query: 222 PXXPXXPGXXLGXPHGRPXCWIXXPGXXXXGXPPQGPRGF-XXXGVGXKKIXXGNPXXXX 398
P P G L P +P C PG PP GP+G G G P
Sbjct: 134 PGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPP-GPKGLPGPQGDAGTSGQDGVPGLPG 192
Query: 399 PXXAPHFFXPXXXXPXXXGGXSXKXXXXXQKKGGXXNXXXXPPXXXXPPPPXXXPPXPXL 578
P P P G + + PP PP P P P
Sbjct: 193 P--------PGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGPPGK 244
Query: 579 XXXPXXXGXXPSXSXPPNXXGAPXVSG 659
P G P P G+ + G
Sbjct: 245 DGQPGKAG-PPGLPGDPGEKGSDGLPG 270
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP*XXXGPXC 652
PP P PPPP P P P P+ P GP C
Sbjct: 48 PPPAPIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGPPPCFGPAC 95
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 4/51 (7%)
Frame = +1
Query: 520 PPXFXXTPPPPXXXPXXPP----XXXPPXLXGXXXXXXXXLIXXGPPXXXG 660
PP F PP P PP PP G +I GPP G
Sbjct: 42 PPCFDCPPPAPIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGPPPCFG 92
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 661 PPXTXGAPXXLGGXLXEGXXPXXXGXXXRXGXGGXXXGGGGXXXXGGXXXXXXXPP 494
PP G GG G G G GG GGGG GG PP
Sbjct: 58 PPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPP 113
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 661 PPXTXGAPXXLGGXLXEGXXPXXXGXXXRXGXGGXXXGGGGXXXXGGXXXXXXXPP 494
PP G GG G G G GG GGGG GG PP
Sbjct: 57 PPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPP 112
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 661 PPXTXGAPXXLGGXLXEGXXPXXXGXXXRXGXGGXXXGGGGXXXXGG 521
PP G GG G G G GG GGGG GG
Sbjct: 115 PPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG 161
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 661 PPXTXGAPXXLGGXLXEGXXPXXXGXXXRXGXGGXXXGGGGXXXXGG 521
PP G GG G G G GG GGGG GG
Sbjct: 114 PPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGG 160
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 647 GGPXXIRGGTLRGXGPXXXGGXXKGGXXGXXXGGGG 540
GG GG+ G G GG GG G GGGG
Sbjct: 134 GGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGG 169
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 667 ATPPXTXGAPXXLGGXLXEGXXPXXXGXXXRXGXGGXXXGGGGXXXXGG 521
A PP G GG G G G GG GGGG GG
Sbjct: 73 APPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 121
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 647 GGPXXIRGGTLRGXGPXXXGGXXKGGXXGXXXGGGG 540
GG GG+ G G GG GG G GGGG
Sbjct: 134 GGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGG 169
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 667 ATPPXTXGAPXXLGGXLXEGXXPXXXGXXXRXGXGGXXXGGGGXXXXGG 521
A PP G GG G G G GG GGGG GG
Sbjct: 73 APPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 121
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXP 577
PP PP PPPP PP P
Sbjct: 133 PPPPPPPHYPPPPPHYPPPPPAP 155
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPP 565
PP PP PPPP PP
Sbjct: 132 PPPPPPPPHYPPPPPHYPP 150
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 491 KRGXXXPPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXP 625
+ G PP PP PP PP P PP P P
Sbjct: 132 RAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP 176
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 497 GXXXPPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
G PP PP PPP PP P P P P
Sbjct: 135 GSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -1
Query: 647 GGPXXIRGGTLRGXGPXXXGGXXKGGXXGXXXGGGG 540
GG RGG G G GG GG G GGGG
Sbjct: 238 GGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGG 273
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -1
Query: 629 RGGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGG 519
RGG+ G G GG GG G GGGG GG
Sbjct: 212 RGGSGGGGGGGGGGGYGSGG--GWGGGGGGRDRDRGG 246
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Frame = +2
Query: 497 GXXXPPXXPPXXXXPPPPXXXPP-----XAXPXXXPP 592
G PP PP PPPP PP A P PP
Sbjct: 86 GMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPP 122
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Frame = +2
Query: 497 GXXXPPXXPPXXXXPPPPXXXPP-----XAXPXXXPP 592
G PP PP PPPP PP A P PP
Sbjct: 109 GMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPP 145
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Frame = +2
Query: 497 GXXXPPXXPPXXXXPPPPXXXPP-----XAXPXXXPP 592
G PP PP PPPP PP A P PP
Sbjct: 359 GMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPP 395
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -1
Query: 647 GGPXXIRGGTLRGXGPXXXGGXXKGGXXGXXXGGGG 540
GGP RGG G GG +GG G GGGG
Sbjct: 309 GGPMGGRGG-FGGDRGGYGGGGGRGGFDGGRGGGGG 343
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/106 (24%), Positives = 27/106 (25%)
Frame = -3
Query: 576 GXAXGGXXXGGGGXXKXGGXXGGXXXPLFFGXXXXFXWKXPXXXGXFXXXXEKNGGQXXG 397
G G GGGG G GG G GG G
Sbjct: 321 GGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAG 380
Query: 396 XXXXGSPXKFFXPPPLXXKXPLXPGGGGXXTGXXGSKSNKXAXHGG 259
G+P P P P P GGG G G GG
Sbjct: 381 GGGGGAPQA--APAPQAAPAPAAPAGGGYNAGGGGGAGGGGGYAGG 424
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 539 PPPPXXXPPXAXPXXXPPXXGXXPLXE 619
PPPP PP A P PP P E
Sbjct: 489 PPPPPPLPPIATPSSVPPPPPPPPALE 515
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 629 RGGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGG 519
RGG G G GG GG G GG G GG
Sbjct: 814 RGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGG 850
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = -1
Query: 647 GGPXXIRGGTLRGXGPXXXGGXXKGGXXG-----XXXGGGGVXXXXGG 519
GG GGT RG G GG +GG G GGGG GG
Sbjct: 812 GGRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGSGG 859
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/65 (33%), Positives = 23/65 (35%)
Frame = -1
Query: 647 GGPXXIRGGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGGXXXVXXXPFFLGXXXXF 468
GG GG G G GG GG G GGGG GG P L +
Sbjct: 98 GGGGCGGGGGCGGGGGGGCGGGG-GGGCGGGGGGGGGGYASGGSGGFASAPVSL-PAPSY 155
Query: 467 XGXPP 453
G PP
Sbjct: 156 GGPPP 160
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -1
Query: 647 GGPXXIRGGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGG 519
GGP GG G GG GG GGGG GG
Sbjct: 780 GGPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGG 822
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -3
Query: 645 GPXXY*GGXSXRGXXPQXGGXXXGXAXGGXXXGGGGXXKXGGXXG 511
GP GG G GG G G GGG GG G
Sbjct: 781 GPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGG 825
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/93 (26%), Positives = 27/93 (29%)
Frame = +2
Query: 332 KGXFXXRGGGKKNFXGEPXXXXPXXCPPFFSXXXXKXPXXXGXFX*XXXXXPKKRGXXXP 511
+G F RGGG + P P P G P RG
Sbjct: 1527 RGGFPQRGGGPGMGPSQYYHDSPQNRGPPMGGL----PPPHGGMNGWRGGPPPPRGGSHC 1582
Query: 512 PXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXP 610
PP PPP PP P PP G P
Sbjct: 1583 QGPPPLMGGPPPRLGMPPPGPP---PPNGGPPP 1612
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXA---XPXXXPPXXGXXPLXEXPP 628
PP P PPPP P A P PP P+ PP
Sbjct: 39 PPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPMPVAPP 81
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 5/44 (11%)
Frame = +2
Query: 512 PXXPPXXXXPPPPXXXP-----PXAXPXXXPPXXGXXPLXEXPP 628
P PP PPPP P P P PP P PP
Sbjct: 82 PYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPP 125
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 629 RGGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGG 519
RGG G G GG GG G GGGG GG
Sbjct: 21 RGG-YGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGG 56
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -1
Query: 629 RGGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGG 519
RGG G G G +GG G G GG GG
Sbjct: 78 RGGGRGGNGGFGDNGGLRGGNGGGRGGNGGFDDNGGG 114
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 626 GGTLRGXGPXXXGGXXKGGXXGXXXGGGGVXXXXGG 519
GG+ G GG GG G GGGG GG
Sbjct: 171 GGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGG 206
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 539 PPPPXXXPPXAXPXXXPPXXGXXP 610
PPPP PP A P PP P
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPP 519
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 522 PPXXXXPPPPXXXPPXPXLXXXPXXXGXXPSXSXPP 629
P PP P PP P L P P + PP
Sbjct: 66 PAPLLAPPAPLLAPPAPVLAAAPAFAAPAPVFAAPP 101
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
PP P PPP P PP G P PP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 303
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 485 PKKRGXXXPPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP*XXXGP 646
P G P PP PPP PP P PP G + PP GP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP--GPP--GMPGMPPPPPPSRFGP 327
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 509 PPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP 628
PP P PPP P PP G P PP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 313
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 485 PKKRGXXXPPXXPPXXXXPPPPXXXPPXAXPXXXPPXXGXXPLXEXPP*XXXGP 646
P G P PP PPP PP P PP G + PP GP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP--GPP--GMPGMPPPPPPSRFGP 337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,530,577
Number of Sequences: 27780
Number of extensions: 260462
Number of successful extensions: 2426
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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