Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N13
(847 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schi... 50 4e-07
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 36 0.007
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 31 0.16
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.63
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 29 0.83
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.4
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 27 2.5
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 27 2.5
SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2 |Sc... 27 3.3
SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces p... 27 4.4
>SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 50.0 bits (114), Expect = 4e-07
Identities = 25/75 (33%), Positives = 43/75 (57%)
Frame = +2
Query: 272 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIXAPGANALSACEL 451
A+ +RS T++T+ VL+A L V+G G + +D+D A ++G+ V +P AN+ S EL
Sbjct: 100 AIGIRSKTRLTRRVLEAADSLIVIGCFCIGTNQVDLDFAAERGIAVFNSPYANSRSVAEL 159
Query: 452 TCTLMLVLGSPRGSQ 496
++ L G +
Sbjct: 160 VIGYIISLARQVGDR 174
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 35.9 bits (79), Expect = 0.007
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = -2
Query: 564 PAXXAASVQSPXPTCQPSGASGSWDPRGEPRTNINVQVSSHALSALAPGAXITP-TPFLP 388
P +S +P P S S P P T+ + S+ S G TP TP +P
Sbjct: 306 PPTSTSSTSTPPPPASTSSTGTSSSPL--PSTSTSCTTST---SIPPTGNSTTPVTPTVP 360
Query: 387 AESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 268
STS STP P P + S T S++ L++ TT S
Sbjct: 361 PTSTSSTSTPPP--PASTSSTGTSSSPLLSTSTSCTTSTS 398
Score = 33.5 bits (73), Expect = 0.039
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = -2
Query: 564 PAXXAASVQSPXPTCQPSGASGSWDPRGEPRTNINVQVSSHALSALAPGAXITP-TPFLP 388
P +S P P S + +P P T+ + S+ + TP TP +P
Sbjct: 139 PPTSTSSTSIPIPPTSTSSTDTNSNPL--PTTSTSCTTSTSIPPTGGSSSLSTPITPTVP 196
Query: 387 AESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 268
STS S P P PT+ S T +++ L T TT S
Sbjct: 197 PTSTSSTSIPIP--PTSTSSTDTNSSPLPTTSTSCTTSTS 234
Score = 33.1 bits (72), Expect = 0.051
Identities = 28/99 (28%), Positives = 38/99 (38%)
Frame = -2
Query: 564 PAXXAASVQSPXPTCQPSGASGSWDPRGEPRTNINVQVSSHALSALAPGAXITPTPFLPA 385
P +S P P S + P T+ S + + ITPT +P
Sbjct: 196 PPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPT--VPP 253
Query: 384 ESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 268
STS S P P PT+ S T +++ L T TT S
Sbjct: 254 TSTSSTSIPIP--PTSTSSTDTNSSPLPTTSTSCTTSTS 290
Score = 31.9 bits (69), Expect = 0.12
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = -2
Query: 564 PAXXAASVQSPXPTCQPSGASGSWDPRGEPRTNINVQVSSHALSALAPGAXITP-TPFLP 388
P +S P P S + P P T+ + S+ S G TP TP +P
Sbjct: 252 PPTSTSSTSIPIPPTSTSSTDTNSSPL--PTTSTSCTTST---SIPPTGNSTTPVTPTVP 306
Query: 387 AESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 268
STS STP P P + S T S++ L + TT S
Sbjct: 307 PTSTSSTSTPPP--PASTSSTGTSSSPLPSTSTSCTTSTS 344
Score = 29.5 bits (63), Expect = 0.63
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = -2
Query: 540 QSPXPTCQPSGASGSWDPRGEPRTNINVQVSSHALSALAPGAXITP-TPFLPAESTSMLS 364
+S T S S P P T+ + S+ + TP TP +P STS S
Sbjct: 90 ESTSSTSSASTTGSSSSPL--PSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTS 147
Query: 363 TPAPARPTTFSFTPASNTSLVT*VAERTTRAS 268
P P PT+ S T ++ L T TT S
Sbjct: 148 IPIP--PTSTSSTDTNSNPLPTTSTSCTTSTS 177
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = -2
Query: 504 SGSWDPRGEPRTNINVQVSSHALSALAPGAXITPTPFLPAESTSMLSTPAPARPTTFSFT 325
S S P T N S+ L P +T TP T+ S P + P T S
Sbjct: 517 SSSTPVTSTPVTTTNCTTSTSVLYTSTP---VTSTPLATTNCTTSTSVPYTSTPVTSSNY 573
Query: 324 PASNTSLVT*VAERTTRAS 268
S+++ VT TT +
Sbjct: 574 TISSSTPVTSTPVTTTNCT 592
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -2
Query: 552 AASVQSPXPTCQPSGASGSWDPRGEPRTNINVQVSSHALSALAPGAXITPTPFLPAESTS 373
A + P T +GAS P +T ++ A +A P A P P +P + +
Sbjct: 318 ATDIPPPYSTPSVAGASDYSTPSAGYQTVQTTTTTTEAAAAQYPQAAFPPPPVMPQPAAA 377
Query: 372 MLSTPAPA 349
++TP A
Sbjct: 378 AVTTPVAA 385
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.5 bits (63), Expect = 0.63
Identities = 21/80 (26%), Positives = 42/80 (52%)
Frame = -2
Query: 552 AASVQSPXPTCQPSGASGSWDPRGEPRTNINVQVSSHALSALAPGAXITPTPFLPAESTS 373
+ SV+ P + S S +P+++ + SS SA +P + ++ + + +E +S
Sbjct: 453 STSVKQPTASVASSSVSVPSSSSVQPQSSTPISSSS---SASSPQSTLSTSSEVVSEVSS 509
Query: 372 MLSTPAPARPTTFSFTPASN 313
L + + A P+T S TP+S+
Sbjct: 510 TLLSGSSAIPSTSSSTPSSS 529
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 29.1 bits (62), Expect = 0.83
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 305 KEVLD-AGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIXAPGANALSACELTCTLMLVLGS 481
KE++D +K + GAG + +DV + +G+ V P A+ + L+LG+
Sbjct: 71 KEIIDNLPPSVKFICHLGAGYETVDVAACTARGIQVSHVP--KAVDDATADVGIFLMLGA 128
Query: 482 PRG 490
RG
Sbjct: 129 LRG 131
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.4
Identities = 28/107 (26%), Positives = 42/107 (39%)
Frame = -2
Query: 564 PAXXAASVQSPXPTCQPSGASGSWDPRGEPRTNINVQVSSHALSALAPGAXITPTPFLPA 385
P AS S P P S P P ++ + + A L P A I P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM 463
Query: 384 ESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWLGXSIRS 244
+ L APA P + PA+ + + + ++ RA+ L SIR+
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAPAAPVASIAELPQQDGRAN-LMASIRA 509
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -2
Query: 441 ALSALAPGAXITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTR 274
++SAL+ + + PT + S S PAP P + S +P ++ V +R
Sbjct: 229 SVSALSSSSHLQPTSATSSSSRLYPSRPAPTPPASSSSSPLLSSQTVKTTTSNASR 284
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.5 bits (58), Expect = 2.5
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 546 SVQSPXPTCQPSGASGSWDPRGEPRTNINVQVSSHA-LSALAPGAXITPTPFLPAESTSM 370
S +P + P G GS + T+ V+ + + L ALA A P P ES S
Sbjct: 161 SAAAPSQSTNPEGNGGSVGSQAAAPTSRPVENDAASILEALAAFAQKAPVPSAAEESVST 220
Query: 369 LSTPAPARPTTFSFTP 322
PA A P+ + P
Sbjct: 221 PPQPAVA-PSVSAVVP 235
>SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 390 PAESTSMLSTPAPARPTTFSFTPASNTS 307
P+ ++ +PAP T S +PA+NTS
Sbjct: 125 PSSISNSSESPAPINSATASMSPANNTS 152
>SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 489 PRGEPRTNINVQVSSHALSALAPGAXITPTPFLP 388
P EP+ +N QV LS+L+ + PTP P
Sbjct: 288 PLMEPQVYVNPQVLPGRLSSLSKPVSLPPTPSSP 321
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,250,127
Number of Sequences: 5004
Number of extensions: 34215
Number of successful extensions: 148
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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