Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N13
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 73 3e-13
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 70 2e-12
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026... 66 4e-11
02_04_0129 + 20020388-20021215 38 0.010
04_01_0035 - 433848-434372,434905-435381 36 0.041
04_01_0037 + 444239-444667,444817-444825 35 0.094
04_01_0038 + 446314-446787,446829-447350 34 0.16
06_03_0086 + 16458881-16458952,16461795-16461966,16462621-164628... 33 0.29
02_05_0814 - 31970558-31971126,31971242-31971413 33 0.38
09_06_0184 - 21413275-21414267 32 0.50
09_06_0081 + 20745627-20748144,20748211-20748308 31 0.87
06_03_1189 + 28271185-28271394,28272421-28273326 31 0.87
02_01_0450 + 3234378-3234834,3235118-3235223,3235722-3235920,323... 31 0.87
01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010 31 0.87
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 31 1.2
04_01_0036 + 436592-437572 31 1.2
09_02_0252 - 6315834-6315959,6316074-6317018 30 2.0
03_06_0277 + 32814621-32814996,32815419-32815558,32816074-32816160 29 3.5
03_02_0536 - 9284079-9286034 29 4.7
11_04_0212 - 14919074-14919433,14919444-14920514 29 6.2
04_04_1125 + 31085106-31085714 29 6.2
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708... 28 8.1
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 72.9 bits (171), Expect = 3e-13
Identities = 36/69 (52%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +2
Query: 245 LLMEXPNHDALVVRSATQVTKEVLDAGV-KLKVVGRAGAGVDNIDVDSAGKKGVGVIXAP 421
LL + DAL+VRS T+VT+EVL+AG +L+VVGRAG G+DN+D+ +A + G V+ AP
Sbjct: 111 LLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAP 170
Query: 422 GANALSACE 448
AN ++A E
Sbjct: 171 TANTVAAAE 179
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 269 DALVVRSATQVTKEVLDAGV-KLKVVGRAGAGVDNIDVDSAGKKGVGVIXAPGANALSAC 445
DALVVRSAT+VT+EV +A +L+VVGRAG G+DN+D+ +A + G V+ AP AN ++A
Sbjct: 113 DALVVRSATRVTREVFEAARGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVAAA 172
Query: 446 ELTCTLMLVL 475
E L+ +
Sbjct: 173 EHAIALLAAM 182
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 510 LKAGRWXRGSVHWQRXSLXX-TLPILGLGRVXRXVAXXMYAFGMNII 647
LKAG+W R + SL TL I+G G+V VA GM+II
Sbjct: 193 LKAGKWQRNK--YVGVSLVGKTLAIMGFGKVGSEVARRAKGLGMDII 237
>04_04_1392 +
33201015-33201600,33202030-33202406,33202528-33202638,
33202720-33202815,33202899-33203570
Length = 613
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +2
Query: 245 LLMEXPNHDALVVRSATQVTKEVLDA-GVKLKVVGRAGAGVDNIDVDSAGKKGVGVIXAP 421
L + P DAL+VRS T+V ++V +A G +L+VVGRAG G+DN+D+ +A + G V+ AP
Sbjct: 105 LRAKIPLCDALIVRSGTKVGRDVFEASGGRLRVVGRAGVGIDNVDLAAATEHGCLVVNAP 164
Query: 422 GANALSACELTCTLMLVL 475
AN ++A E L+ +
Sbjct: 165 TANTVAAAEHGIALLTAM 182
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 510 LKAGRWXRGSVHWQRXSLXX-TLPILGLGRVXRXVAXXMYAFGMNII 647
LKAG+W R + SL T+ ILG G+V VA GM++I
Sbjct: 193 LKAGKWQRNK--YVGVSLVGKTIAILGFGKVGSEVARRAKGLGMHVI 237
>02_04_0129 + 20020388-20021215
Length = 275
Score = 37.9 bits (84), Expect = 0.010
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -2
Query: 546 SVQSPXPTCQPSGAS-GSWDPRGEPRTNINVQVSSHALSALAPGAXITPTPFLPAESTSM 370
S+ SP P+ P AS G + P + + +S SA A A P PF P+ + +
Sbjct: 193 SILSPVPSALPPAASSGLFSPLDQASLSWLSDLSPFLHSAGAAAAP--PPPFAPSPRSLL 250
Query: 369 LSTPAPARPTTFS 331
LSTP P TFS
Sbjct: 251 LSTPTMPSPATFS 263
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 35.9 bits (79), Expect = 0.041
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 254 EXPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIXA 418
+ P +V A QV LDA L V GAGVD+ID+ ++GV V A
Sbjct: 59 DPPLAAVVVAGGAIQVNAAFLDAVPSLGCVVTTGAGVDHIDLAECARRGVAVAGA 113
>04_01_0037 + 444239-444667,444817-444825
Length = 145
Score = 34.7 bits (76), Expect = 0.094
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = +2
Query: 272 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIXA 418
A++V + T V+ +++ KL++V GVD+ID+D+ ++G+ V A
Sbjct: 49 AVLVPALTPVSADLVARLPKLEIVVATSTGVDHIDLDACRRRGISVTNA 97
>04_01_0038 + 446314-446787,446829-447350
Length = 331
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +2
Query: 272 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIXAPGANALSACEL 451
AL+ VT +DA L++V + AGVD+I++ + ++G+ V A A + A +
Sbjct: 52 ALLTVDLPAVTAAQIDALPALELVVASSAGVDHINLGACRRRGIAVTNAQNAFSADAADY 111
Query: 452 TCTLMLVL 475
L++ +
Sbjct: 112 AVGLLVAV 119
>06_03_0086 +
16458881-16458952,16461795-16461966,16462621-16462889,
16463045-16463316,16463409-16463533,16463852-16463964,
16464579-16464692
Length = 378
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 299 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIXAPGANALSACELTCTLMLVL 475
+T E + L+++ AG G D+ID+ +A G+ V G+N +S E +L+L
Sbjct: 103 ITAERIKKAKNLELLLTAGVGSDHIDLPAAAAAGLTVAEITGSNTVSVAEDQLMRILLL 161
>02_05_0814 - 31970558-31971126,31971242-31971413
Length = 246
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2
Query: 408 TPTPFLPAESTSMLSTPAPARPTTFSFTP 322
TPTP P ST M +TP P+ P T TP
Sbjct: 159 TPTPTTPYPSTPMPTTPYPSTPMTTPTTP 187
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 423 PGAXITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 268
P + +PTP P ST +TP P+ P TP +T + T TT S
Sbjct: 144 PSSPSSPTPTTPNPSTPTPTTPYPSTP--MPTTPYPSTPMTTPTTPYTTPTS 193
>09_06_0184 - 21413275-21414267
Length = 330
Score = 32.3 bits (70), Expect = 0.50
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = -2
Query: 513 SGASGSWDPR-GEPRTNIN-VQVSSHALSALAPGAX-ITPTPFLPAESTSMLST-PAPAR 346
S S W P G P ++I VQ + +LS+ + A P P LP TSM ST P+P
Sbjct: 41 SSPSDRWSPHIGTPGSHIGAVQAPASSLSSCSETAVSFLPAPALP---TSMESTFPSPRP 97
Query: 345 PTT-FSFTPASN 313
P+T S TP S+
Sbjct: 98 PSTPSSSTPPSS 109
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 31.5 bits (68), Expect = 0.87
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = -2
Query: 537 SPXPTCQPSGASGSWDPRGEPRTN-INVQVSSHALSALAPG--AXITPTPFLPAESTSML 367
SP TC G G+ PR I++ + + A AP A PTP PA M
Sbjct: 305 SPTTTCHSLGYDGASSSFATPRMRTISLALRAPAPHLRAPRTLAPPAPTPPAPATPVPMP 364
Query: 366 STPAPARPTTFSFTPASNTSLVT*VAERTTRASW 265
TP PT + P ++ V+ TTR S+
Sbjct: 365 PTPTRLVPTPPAPGPPADVPPRFTVSPTTTRPSF 398
>06_03_1189 + 28271185-28271394,28272421-28273326
Length = 371
Score = 31.5 bits (68), Expect = 0.87
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 614 GHXAADPAKAKDGEGXXQRXSLPVYRAPXPP 522
G A +P KA+DGE R LP+ AP P
Sbjct: 90 GDEADEPTKARDGEAPAARGELPLVPAPFVP 120
>02_01_0450 +
3234378-3234834,3235118-3235223,3235722-3235920,
3236119-3236187,3236299-3236373,3236484-3236582,
3236694-3236864,3237394-3237519
Length = 433
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 525 TCQPSGASGSWDPRGEPRTNINVQVSSHALSALAPGAXITPTPFLPAESTSMLS 364
T + G G+W P G R VQ++ L+A A ITP P + +L+
Sbjct: 356 TAEGDGDGGAWTPCGPTRPGA-VQITMQELAAKGLAAQITPPPITRTDLDKVLA 408
>01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010
Length = 454
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 272 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIXAP 421
A+V + V ++DA L++V G+D +D+D+ ++GV V P
Sbjct: 50 AVVPYALQGVDAAMIDALPSLEIVSSFSVGIDRVDLDACLRRGVRVTNTP 99
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +2
Query: 263 NHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIXAPGA---NA 433
N+ +V++ + +++ ++KV+ + G G++ +DV++A + + V G+ NA
Sbjct: 40 NYHLCIVKNRL-IDSDIIAKASQMKVIMQYGVGIEGVDVNAATEHKIKVARINGSTTGNA 98
Query: 434 LSACELTCTLML 469
+S E+ L L
Sbjct: 99 VSCAEMAIYLTL 110
>04_01_0036 + 436592-437572
Length = 326
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 299 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIXAPGANALSACELTCTLML 469
V E+LDA L+ + AG ++ID+ ++GV V A G + + L+L
Sbjct: 63 VGAELLDAVPSLRCIITVSAGTNHIDLRECARRGVQVANAGGIYSTDVADYAVGLLL 119
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 456 QVSSHALSALAPGAXITPTPFLPAESTSMLSTPAPARPTTFSFTPASN 313
+VSS LS+ PG P P P STS TP+P + TP +N
Sbjct: 31 EVSSRYLSSTTPG----PVPSSPRLSTSSSRTPSPRAHRPRAATPFAN 74
>03_06_0277 + 32814621-32814996,32815419-32815558,32816074-32816160
Length = 200
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -2
Query: 483 GEPRTNINVQVSSHALSALAPGAXITPTPFLPAESTSMLSTP--APARPTTFSFTPAS 316
G ++ V V + A +AL PGA P PA + P +PA PTT TPA+
Sbjct: 92 GGTAASLGVAVDT-ARAALLPGACSVQAP--PASQCNAAGVPVSSPANPTTSGGTPAT 146
>03_02_0536 - 9284079-9286034
Length = 651
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -2
Query: 504 SGSWDPRGEPRTNINVQVSSHALS--ALAPGAXITPTPFLPAESTSMLSTPAPARPTTFS 331
+G +D +G R ++N QV++ + S AL P T LPA SM + + S
Sbjct: 508 NGMYD-QGAVRQHVNAQVTTGSASSVALPPAGQKTQVLALPAPDGSMQNVGGDPFAASLS 566
Query: 330 FTPAS 316
F P S
Sbjct: 567 FPPPS 571
>11_04_0212 - 14919074-14919433,14919444-14920514
Length = 476
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 662 RKGGSDDVHAEGVHXXGHXAADPA 591
R+GG+++ HA GV G DPA
Sbjct: 332 RRGGAEEAHAAGVGGEGEGERDPA 355
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2
Query: 423 PGAXITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 307
P TP P P T TP PA P TPA+ T+
Sbjct: 59 PPTPWTPPPATPTPPTPTPWTPTPATPPPTPATPATPTT 97
>03_02_0283 -
7078754-7078856,7079358-7079431,7079995-7080090,
7080145-7080270,7080856-7080939,7081458-7081506,
7081630-7081688,7081908-7081925,7082141-7082620
Length = 362
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 540 QSPXPTCQPSGASGSWDPRGEPRTNINVQVSSHALSALAPGAXITPTPF 394
Q P T P+ A+ + P+ PR + SS +A +P P PF
Sbjct: 7 QRPPATSPPAPAAAAASPQPLPRAFLAAAASSPRRAAASPAPAPPPPPF 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,430,401
Number of Sequences: 37544
Number of extensions: 319978
Number of successful extensions: 1532
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1515
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -