Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_N12
         (1181 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3WGL1 Cluster: Putative uncharacterized protein precur...    36   2.0  
UniRef50_UPI00015B4CAB Cluster: PREDICTED: hypothetical protein;...    35   4.7  
UniRef50_Q3HTL0 Cluster: Pherophorin-V1 protein precursor; n=1; ...    30   5.2  
UniRef50_P21997 Cluster: Sulfated surface glycoprotein 185 precu...    28   6.9  

>UniRef50_Q3WGL1 Cluster: Putative uncharacterized protein
           precursor; n=1; Frankia sp. EAN1pec|Rep: Putative
           uncharacterized protein precursor - Frankia sp. EAN1pec
          Length = 555

 Score = 35.9 bits (79), Expect = 2.0
 Identities = 33/115 (28%), Positives = 36/115 (31%)
 Frame = +2

Query: 431 PPXFXPPXPXPPPXIXXXXXGRKXCXXXXXVXDRXITLFPPTXVAXXXQPPXXGVPAEPX 610
           PP   PP P PP  +     G               T+ PPT V     PP   VP  P 
Sbjct: 105 PPTAVPPPPAPPATVVPPTVGPPTAVPAPPATVVPPTVGPPTAVPPPPAPPATVVP--PT 162

Query: 611 KXXXXXAPTRDAXXLXPTKARXPRXXP*AXQXFPPPPXXPXTYXSRGXXPVCASP 775
                  P   A  + PT        P A    PPPP  P T       P  A P
Sbjct: 163 VGPPTAVPAPPATVVPPTVG-----PPTA---VPPPPAPPATVVPPTVGPPTAVP 209


>UniRef50_UPI00015B4CAB Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 972

 Score = 34.7 bits (76), Expect = 4.7
 Identities = 28/103 (27%), Positives = 29/103 (28%), Gaps = 1/103 (0%)
 Frame = +2

Query: 434 PXFXPPXPXPPPXIXXXXXGRKXCXXXXXVXDRXITLFPPTXVAXXXQPPXXGVPAEPXK 613
           P   PP    PP        R              T  PP       QPP    P  P  
Sbjct: 467 PFTLPPATRTPPPPPTRPPTRPPPTRPPPPPTAPSTYLPPAPPTRPPQPPVTRPPPPPPT 526

Query: 614 XXXXXAPTRDAXXLXP-TKARXPRXXP*AXQXFPPPPXXPXTY 739
                 PTR      P T+   P   P      PPPP  P TY
Sbjct: 527 RPPPPPPTRPPVTQTPYTRPPPPPTRPPTRP--PPPPTQPSTY 567


>UniRef50_Q3HTL0 Cluster: Pherophorin-V1 protein precursor; n=1;
           Volvox carteri f. nagariensis|Rep: Pherophorin-V1
           protein precursor - Volvox carteri f. nagariensis
          Length = 590

 Score = 29.9 bits (64), Expect(2) = 5.2
 Identities = 20/87 (22%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
 Frame = +2

Query: 548 PPTXVAXXXQPPXXGVPAEPXKXXXXXAPTRDAXXLXPTKARXPRXXP*AXQXFPPP--P 721
           PP   +    PP    P  P       +P        P     P   P      PPP  P
Sbjct: 211 PPPSPSPPPSPPPPPSPPPPPPPPPPPSPPPPPPPPPPPSPPPPPSPPPPSPPLPPPSIP 270

Query: 722 XXPXTYXSRGXXPVCASPXXVXXXPDI 802
             P  +  R    VC     +   PD+
Sbjct: 271 SPPFAFGFRPFCDVCIKAQLLAPFPDV 297



 Score = 23.4 bits (48), Expect(2) = 5.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 431 PPXFXPPXPXPPP 469
           PP   PP P PPP
Sbjct: 207 PPPPPPPSPSPPP 219


>UniRef50_P21997 Cluster: Sulfated surface glycoprotein 185
           precursor; n=1; Volvox carteri|Rep: Sulfated surface
           glycoprotein 185 precursor - Volvox carteri
          Length = 485

 Score = 28.3 bits (60), Expect(2) = 6.9
 Identities = 16/63 (25%), Positives = 17/63 (26%)
 Frame = +2

Query: 578 PPXXGVPAEPXKXXXXXAPTRDAXXLXPTKARXPRXXP*AXQXFPPPPXXPXTYXSRGXX 757
           PP    P  P        P        P     PR  P      PPPP  P    +    
Sbjct: 267 PPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRKPPSPSPPVPPPPSPPSVLPAATGF 326

Query: 758 PVC 766
           P C
Sbjct: 327 PFC 329



 Score = 24.6 bits (51), Expect(2) = 6.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 425 SXPPXFXPPXPXPPP 469
           S PP   PP P PPP
Sbjct: 259 SPPPPPPPPPPPPPP 273


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,195,764
Number of Sequences: 1657284
Number of extensions: 7403042
Number of successful extensions: 28779
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25825
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 118318866513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)