Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N11
(1014 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 36 0.012
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.028
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.085
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.26
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.4
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 2.4
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 27 3.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 4.2
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 26 9.7
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 35.5 bits (78), Expect = 0.012
Identities = 28/103 (27%), Positives = 28/103 (27%), Gaps = 4/103 (3%)
Frame = +2
Query: 572 GGXXPPPPXXKXXXXXXGPPPPXXXPXXHXXLFXXXXXXPPXXXXPPPXXXXPXXXXPPX 751
G PPPP PPP P H P PPP P PP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Query: 752 PXXXXXPXXPXXXXXPPP----PXXXPPPXPXXXXXXXXXPXP 868
P P PPP P PP P P P
Sbjct: 263 PMH----HEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 32.3 bits (70), Expect = 0.11
Identities = 30/123 (24%), Positives = 31/123 (25%), Gaps = 5/123 (4%)
Frame = +3
Query: 513 PTQPXXXXXGPXGPGXPSXGG-GXXXPPPXXKXPXXXXXXPPPXXXPXXTXXXXXXXXXX 689
P P G P P G PPP PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 690 PXXXXXPPPXXX-PXXXXPPPXX---PXXXLPXXPGXXXXPPXPXXXPPPXXXXXXXXXP 857
P PPP P PPP P +P P P PPP P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP--MHHEPGEHMPPPPMHHEPGEHMP 325
Query: 858 PXP 866
P P
Sbjct: 326 PPP 328
Score = 32.3 bits (70), Expect = 0.11
Identities = 30/123 (24%), Positives = 31/123 (25%), Gaps = 5/123 (4%)
Frame = +3
Query: 513 PTQPXXXXXGPXGPGXPSXGG-GXXXPPPXXKXPXXXXXXPPPXXXPXXTXXXXXXXXXX 689
P P G P P G PPP PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 690 PXXXXXPPPXXX-PXXXXPPPXX---PXXXLPXXPGXXXXPPXPXXXPPPXXXXXXXXXP 857
P PPP P PPP P +P P P PPP P
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP--MHHEPGEHMPPPPMHHEPGEHMP 338
Query: 858 PXP 866
P P
Sbjct: 339 PPP 341
Score = 31.5 bits (68), Expect = 0.20
Identities = 25/101 (24%), Positives = 26/101 (25%), Gaps = 4/101 (3%)
Frame = +3
Query: 576 GXXXPPPXXKXPXXXXXXPPPXXXPXXTXXXXXXXXXXPXXXXXPPPXXX-PXXXXPPPX 752
G PPP PPP P PPP P PPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Query: 753 X---PXXXLPXXPGXXXXPPXPXXXPPPXXXXXXXXXPPXP 866
P +P P P PPP PP P
Sbjct: 264 MHHEPGEHMPPPP--MHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 31.1 bits (67), Expect = 0.26
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +2
Query: 572 GGXXPPPPXXKXXXXXXGPPPPXXXPXXHXXLFXXXXXXPPXXXXPPPXXXXPXXXXPPX 751
G PPPP PPP P H P PPP P PP
Sbjct: 282 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPPPMHHEPGEHMPPP 340
Query: 752 P 754
P
Sbjct: 341 P 341
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.028
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 691 PXPXXXPPPXXXPXXXXPPXPXPXXXSPXPXGXXXXPPXXXXXPPPXXXXPXXXXXPXP 867
P P PP P PP P P P P PP P P P P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 33.9 bits (74), Expect = 0.037
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 691 PXPXXXPPPXXXPXXXXPPXPXPXXXSPXPXGXXXXPPXXXXXPPPXXXXPXXXXXPXP 867
P P PP P PP P P P P PP P P P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 32.3 bits (70), Expect = 0.11
Identities = 22/94 (23%), Positives = 23/94 (24%), Gaps = 2/94 (2%)
Frame = +3
Query: 591 PPXXKXPXXXXXXPPPXXXPXXTXXXXXXXXXXPXXXXXP--PPXXXPXXXXPPPXXPXX 764
PP K PPP P P PP P PP P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 765 XLPXXPGXXXXPPXPXXXPPPXXXXXXXXXPPXP 866
+P P PP P PP P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 31.9 bits (69), Expect = 0.15
Identities = 18/73 (24%), Positives = 18/73 (24%)
Frame = +1
Query: 712 PPXXXPXXXXPPXPXPXXXSPXPXGXXXXPPXXXXXPPPXXXXPXXXXXPXPXXXXXXXX 891
PP P PP P P P P PP P P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 892 XXXXXXXXPXXPP 930
P PP
Sbjct: 1181 VPKPAAGVPPVPP 1193
Score = 31.1 bits (67), Expect = 0.26
Identities = 24/105 (22%), Positives = 24/105 (22%)
Frame = +3
Query: 552 PGXPSXGGGXXXPPPXXKXPXXXXXXPPPXXXPXXTXXXXXXXXXXPXXXXXPPPXXXPX 731
P S G PPP P P P P PP P
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA--PPVPKPS 1108
Query: 732 XXXPPPXXPXXXLPXXPGXXXXPPXPXXXPPPXXXXXXXXXPPXP 866
PP P P PP P P PP P
Sbjct: 1109 VAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 28.7 bits (61), Expect = 1.4
Identities = 24/109 (22%), Positives = 26/109 (23%), Gaps = 4/109 (3%)
Frame = +3
Query: 552 PGXPSXGGGXXXPPPXXKXPXXXXXX-PPPXXXPXXTXXXXXXXXXXPXXXXXP---PPX 719
P P+ G P P P PP P P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 720 XXPXXXXPPPXXPXXXLPXXPGXXXXPPXPXXXPPPXXXXXXXXXPPXP 866
P PP P +P P PP P PP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 28.3 bits (60), Expect = 1.8
Identities = 23/95 (24%), Positives = 23/95 (24%), Gaps = 2/95 (2%)
Frame = +2
Query: 590 PPXXKXXXXXXGPPPPXXXPXXHXXLFXXXXXXPPXXXXPPPXXXXPXXXXPPXPXXXXX 769
PP K P P P P PP P PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP--VPKPAAGVPPVPPPSEA 1197
Query: 770 PXXPXXXXXPPP--PXXXPPPXPXXXXXXXXXPXP 868
P P PP P PP P P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = +1
Query: 709 PPPXXXPXXXXPPXPXPXXXSPXPXGXXXXPPXXXXXPPPXXXXPXXXXXPXP 867
PPP P P P P P P P P P P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 26.2 bits (55), Expect = 7.4
Identities = 17/65 (26%), Positives = 17/65 (26%), Gaps = 6/65 (9%)
Frame = +2
Query: 692 PXXXXPPPXXXXPXXXXPPXPXXXXXPXXPXXXXXPPPP------XXXPPPXPXXXXXXX 853
P P P PP P P P PP P PPP P
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Query: 854 XXPXP 868
P P
Sbjct: 1075 SIPAP 1079
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.085
Identities = 21/87 (24%), Positives = 22/87 (25%), Gaps = 1/87 (1%)
Frame = +2
Query: 566 PXGGXXPPPPXXKXXXXXXGPPPPXXXPXXHXXLFXXXXXXPPXXXX-PPPXXXXPXXXX 742
P PP P + PP P P PP PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 743 PPXPXXXXXPXXPXXXXXPPPPXXXPP 823
PP P PPPP P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/81 (23%), Positives = 19/81 (23%), Gaps = 1/81 (1%)
Frame = +3
Query: 588 PPPXXKXPXXXXXXPPPXXXPXXTXXXXXXXXXXPXXXXXPPPXXXPXXXXPPPXXPXXX 767
PP P PP P P PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 768 LPXXPG-XXXXPPXPXXXPPP 827
P P PP P PPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +3
Query: 690 PXXXXXPPPXXXPXXXXPPPXXPXXXLPXXPGXXXXPPXPXXXPPPXXXXXXXXXPP 860
P PP P PPP P P PP P PPP PP
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASA--PPIPSKA--PPIPSSLPPPAQPAAPVKSPP 185
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.26
Identities = 26/88 (29%), Positives = 26/88 (29%), Gaps = 1/88 (1%)
Frame = -1
Query: 831 GXGGGXXXGGGGXXXXXGXXGXXXXXGXGGXXXXGXXXXGGGXXXXGGXXXXXXXRXXXX 652
G GG G GG G G G G G GGG G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGF 247
Query: 651 XGXXXG-GGGPXXXXXFFXXGGGGXXPP 571
G G GGGP F G GG P
Sbjct: 248 GGGLGGFGGGPGG----FGGGPGGHGGP 271
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/53 (26%), Positives = 15/53 (28%)
Frame = +3
Query: 708 PPPXXXPXXXXPPPXXPXXXLPXXPGXXXXPPXPXXXPPPXXXXXXXXXPPXP 866
P P P P P +P P P P PPP P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +3
Query: 744 PPXXPXXXLPXXPGXXXXPPXPXXXPPPXXXXXXXXXPP 860
PP P P PP P PPP PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/57 (24%), Positives = 14/57 (24%)
Frame = +1
Query: 697 PXXXPPPXXXPXXXXPPXPXPXXXSPXPXGXXXXPPXXXXXPPPXXXXPXXXXXPXP 867
P P P P P P P P P PPP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/63 (26%), Positives = 17/63 (26%), Gaps = 3/63 (4%)
Frame = +2
Query: 689 PPXXXXPPPXXXXPXXXXPPXPXXXXXPXXPXXXXXP---PPPXXXPPPXPXXXXXXXXX 859
PP P P PP P P P PPP PPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYA 794
Query: 860 PXP 868
P P
Sbjct: 795 PAP 797
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +3
Query: 711 PPXXXPXXXXPPPXXPXXXLPXXPGXXXXPPXPXXXPPPXXXXXXXXXPPXP 866
PP P P P +P PP P PPP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP--PPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +1
Query: 691 PXPXXXPPPXXXPXXXXPPXPXPXXXSPXPXGXXXXPP 804
P P PPP PP P P P PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 584 PPPPXXKXXXXXXGPPPPXXXP 649
PPPP GPPPP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 566 PXGGXXPPPPXXKXXXXXXGPPPPXXXP 649
P G PPPP PPPP P
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 7.4
Identities = 17/68 (25%), Positives = 17/68 (25%), Gaps = 2/68 (2%)
Frame = +3
Query: 630 PPPXXXPXXTXXXXXXXXXXPXXXXXPPPXXXPXXXX--PPPXXPXXXLPXXPGXXXXPP 803
PP P P PPP P PPP P G P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Query: 804 XPXXXPPP 827
P P P
Sbjct: 796 APQAEPEP 803
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1183
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 202 EAPWLRCLSSLCKLNQLASKRSFC*CSYL 116
+AP L LS++C + + KR FC +YL
Sbjct: 967 DAPALSLLSAVCAYDYASDKRKFCKENYL 995
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 560 SXPXGGXXPPPPXXKXXXXXXGPPPP 637
S P G PPPP PPPP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPP 28
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 61 LLSGCGNQENFNLFL-RIKVNKNINKMSAWRQAGLT 165
LL+G Q+ N + +I + K I+ + WRQ GLT
Sbjct: 261 LLTGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLT 296
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,585,832
Number of Sequences: 5004
Number of extensions: 47822
Number of successful extensions: 258
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 527257104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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