Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N10
(941 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.004
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.24
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 31 0.31
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.95
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 6.7
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 8.8
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.1 bits (82), Expect = 0.004
Identities = 25/87 (28%), Positives = 28/87 (32%), Gaps = 3/87 (3%)
Frame = +1
Query: 622 PXXPPPPPXQXIXKFPPPXXKGAXXPXRTFKKPXXVXPPXTPPXXPPPFXHP---XPXTR 792
P PP P + P P GA KP PP P PP P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAP----PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 793 XPXSPLSPXXXNRXGLSXXPPPXXLXP 873
P S + P G+ PPP P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +1
Query: 631 PPPPPXQXIXKFPPPXXKGAXXPXRTFKKPXXVXPPXTPPXXPPPFXHPXPXTRXPXSPL 810
P P P + PPP + P KP PP PP PP P P P P+
Sbjct: 1180 PVPKPAAGVPPVPPPS-EAPPVP-----KPSVGVPPVPPPSTAPPV--PTPSAGLPPVPV 1231
Score = 26.6 bits (56), Expect = 5.1
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +1
Query: 631 PPPPPXQXIXKFPPPXXKGAXXPXRTFKKPXXVXPPXTPPXXPPPFXH-PXPXTRXPXSP 807
PP PP P P P T K P P P P P P + SP
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Query: 808 LS 813
S
Sbjct: 1268 TS 1269
Score = 26.2 bits (55), Expect = 6.7
Identities = 22/88 (25%), Positives = 24/88 (27%), Gaps = 6/88 (6%)
Frame = +1
Query: 631 PPPPPXQXIXKFPPPXXKGAXXPXRTFKKPXXVXPPXTPPXXPPPFXH---PXPXTRXP- 798
PP P I P P P + P P PP P P P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 799 --XSPLSPXXXNRXGLSXXPPPXXLXPP 876
S +P G P P PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.24
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Frame = +1
Query: 622 PXXPPPPPXQXIXKFPP--PXXKGAXXPXRTFKKPXXVXPPXTPPXXPPPFXHPXPXTRX 795
P P PP Q + P P P P P P PPP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 796 PXSPLSPXXXNRXGLSXXPPPXXLXP 873
P +P P PPP P
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPPLSQAP 210
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 30.7 bits (66), Expect = 0.31
Identities = 25/103 (24%), Positives = 34/103 (33%), Gaps = 2/103 (1%)
Frame = -1
Query: 932 GVGGXSXXGLGGXXXXPREGGXSXXGGGXWERPXRFXXXGERGEXGXRVXGXGWXKGGGX 753
G G G GG G + +F + + RV G + GGG
Sbjct: 80 GAEGGPGAGFGGFPGAGPGGARTFHFNMGGPGGAQFFSASDPNDIFERVFGHAFAGGGGM 139
Query: 752 XGGVXGGXTXXGFLKVRXGXXAPXKXGG--GNFXMXCXGGGGG 630
GG+ G + + G + GG G F GGG G
Sbjct: 140 GGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAG 182
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 0.95
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Frame = +1
Query: 631 PPPPPXQXIXKFPPPXXKGAXXPXRTFKKPXXVXPP-----XTPPXXPPP 765
PPPPP I P P P P PP PP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 8.8
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 718 PXXVXPPXTPPXXPPPFXHPXPXTRXPXSPLSPXXXNRXGLSXXPPP 858
P V P TP P P P P P P P G PPP
Sbjct: 736 PPAVIVP-TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 1.3
Identities = 24/106 (22%), Positives = 31/106 (29%), Gaps = 6/106 (5%)
Frame = +1
Query: 577 KXPXXLKXAAXXGFXPXXPPPPPXQXIXKFPPPXXKGAXXPXRTFKKPXXVXPPXTPPXX 756
+ P L + P PP P + PP P PP PP
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL--PPSAPPSL 431
Query: 757 PP------PFXHPXPXTRXPXSPLSPXXXNRXGLSXXPPPXXLXPP 876
PP P P P +P++P + PP PP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 28.3 bits (60), Expect = 1.7
Identities = 24/89 (26%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Frame = +1
Query: 631 PPPPPXQXIXKFPPPXXKGA--------XXPXRTFKKPXXVXPPXTPPXXPPPFXHPXPX 786
PPPPP + PP G+ P R+ PP PPP P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 787 TRXPXSPLSPXXXNRXGLSXXPPPXXLXP 873
T PLS + +S P P P
Sbjct: 372 TGRQPPPLS----SSRAVSNPPAPPPAIP 396
Score = 26.6 bits (56), Expect = 5.1
Identities = 20/70 (28%), Positives = 24/70 (34%)
Frame = +1
Query: 670 PPXXKGAXXPXRTFKKPXXVXPPXTPPXXPPPFXHPXPXTRXPXSPLSPXXXNRXGLSXX 849
PP + P R + P PP PP P P++P N S
Sbjct: 233 PPSIPSSRPPERV----PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTS 288
Query: 850 PPPXXLXPPS 879
PP L PPS
Sbjct: 289 KPP--LPPPS 296
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = +1
Query: 667 PPPXXK-GAXXPXRTFKKPXXVXPPXTPPXXPPPFXHPXPXTRXPXSPLSPXXXNRXGLS 843
PPP + A K+P PP PP + + P P P N G
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP-PPPRSNAAGSI 351
Query: 844 XXPPPXXLXPP 876
PP PP
Sbjct: 352 PLPPQGRSAPP 362
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.2
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = -1
Query: 815 GERGEXGXRVXGXGWXKGG-GXXGGVXGGXTXXGFLKVRXGXXAPXKXGGGNFXMXCXGG 639
G RG G G G GG G GG GG G R G GG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGR--GGSSGG 63
Query: 638 GGGXXG 621
GG G
Sbjct: 64 RGGAKG 69
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -3
Query: 933 GGGGKXXXXFGGGXXXTPGGGX*PXGGGXXGKAXP-VPRXGXKGGXG 796
GG FGGG GGG GG G+ R G GG G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = +1
Query: 718 PXXVXPPXTPPXXPPPFXHPXPXTRXPXSPLSPXXXNRXG--LSXXPPPXXLXPPSR 882
P P PP PPP P T P+ N G ++ PPP P R
Sbjct: 229 PKQADPLPAPPPPPPPTL-PPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPR 284
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
Frame = +1
Query: 613 GFXPXXP-PPPPXQXIXKFPPPXXKGAXXPXRTFKKPXXVXPPXT--PPXXPPPFXHPXP 783
G P P PP + PP P P PP PP PPP P P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP---PLP 1736
Query: 784 XTRXPXSP 807
+ P P
Sbjct: 1737 ASSAPSVP 1744
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 933 GGGGKXXXXFGGGXXXTPGGGX*PXGGGXXGKAXP 829
GG G FGGG GGG GGG G P
Sbjct: 238 GGFGGGPGGFGGGLGGF-GGGPGGFGGGPGGHGGP 271
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,692,827
Number of Sequences: 5004
Number of extensions: 18149
Number of successful extensions: 122
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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