Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_N06
         (955 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   5.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   7.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   9.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   9.4  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 91  TRRTRPHWAICGLRFQNLKEFPI 23
           ++R     AIC +  +N+ EFP+
Sbjct: 183 SKRNSEESAICAMLKENMPEFPL 205


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 604 PRVPLSPYPISLQTT 648
           P +PL P PIS  TT
Sbjct: 649 PSMPLLPRPISCHTT 663


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 540 LPASSTKPSTVHSPL 496
           LP   T P+T HSPL
Sbjct: 440 LPERWTTPTTPHSPL 454


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 150 NQIEHNIRNENVQNMCV 200
           N IE+N  N+N++N  +
Sbjct: 25  NVIEYNFPNDNIRNTLI 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,712
Number of Sequences: 438
Number of extensions: 4960
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31323201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)