Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N05
(963 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 130 6e-30
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 130 6e-30
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 130 6e-30
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 130 6e-30
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 130 6e-30
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 130 6e-30
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 130 6e-30
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 82 3e-15
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 31 6.3
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 130 bits (315), Expect = 6e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 81 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 260
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 261 RRFNGGVGRCAQAKQFGTTQG 323
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 128 bits (308), Expect = 4e-29
Identities = 57/72 (79%), Positives = 66/72 (91%)
Frame = +1
Query: 325 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 504
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 505 SPCHIEVCLSER 540
SPCHIE+ L+E+
Sbjct: 142 SPCHIEMILTEK 153
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 6e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 81 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 260
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 261 RRFNGGVGRCAQAKQFGTTQG 323
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 128 bits (308), Expect = 4e-29
Identities = 57/72 (79%), Positives = 66/72 (91%)
Frame = +1
Query: 325 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 504
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 505 SPCHIEVCLSER 540
SPCHIE+ L+E+
Sbjct: 142 SPCHIEMILTEK 153
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 6e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 81 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 260
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 261 RRFNGGVGRCAQAKQFGTTQG 323
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 124 bits (300), Expect = 4e-28
Identities = 56/72 (77%), Positives = 65/72 (90%)
Frame = +1
Query: 325 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 504
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRA GRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRARGRINPYMS 141
Query: 505 SPCHIEVCLSER 540
SPCHIE+ L+E+
Sbjct: 142 SPCHIEMILTEK 153
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 6e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 81 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 260
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 261 RRFNGGVGRCAQAKQFGTTQG 323
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 128 bits (308), Expect = 4e-29
Identities = 57/72 (79%), Positives = 66/72 (91%)
Frame = +1
Query: 325 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 504
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 505 SPCHIEVCLSER 540
SPCHIE+ L+E+
Sbjct: 142 SPCHIEMILTEK 153
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 6e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 81 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 260
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 261 RRFNGGVGRCAQAKQFGTTQG 323
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 128 bits (308), Expect = 4e-29
Identities = 57/72 (79%), Positives = 66/72 (91%)
Frame = +1
Query: 325 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 504
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 505 SPCHIEVCLSER 540
SPCHIE+ L+E+
Sbjct: 142 SPCHIEMILTEK 153
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 6e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 81 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 260
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 261 RRFNGGVGRCAQAKQFGTTQG 323
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 128 bits (308), Expect = 4e-29
Identities = 57/72 (79%), Positives = 66/72 (91%)
Frame = +1
Query: 325 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 504
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 505 SPCHIEVCLSER 540
SPCHIE+ L+E+
Sbjct: 142 SPCHIEMILTEK 153
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 130 bits (315), Expect = 6e-30
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3
Query: 81 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 260
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 261 RRFNGGVGRCAQAKQFGTTQG 323
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 128 bits (308), Expect = 4e-29
Identities = 57/72 (79%), Positives = 66/72 (91%)
Frame = +1
Query: 325 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 504
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 505 SPCHIEVCLSER 540
SPCHIE+ L+E+
Sbjct: 142 SPCHIEMILTEK 153
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 81.8 bits (193), Expect = 3e-15
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +1
Query: 295 KQSSLAQHRXRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 474
+ S A++R PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYR
Sbjct: 9 RPDSGARYRVAGPKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYR 67
Query: 475 AHGRINPYMSSPCHIEVCLSER 540
AHG+INPY++S CHIE+ L+E+
Sbjct: 68 AHGQINPYVTSACHIEMILTEK 89
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 31.1 bits (67), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 405 RGQASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPH 518
R +S R HS S+ L +Q++ P SRSH P PH
Sbjct: 89 RACSSRRAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPH 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,209,459
Number of Sequences: 237096
Number of extensions: 2012066
Number of successful extensions: 7719
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7719
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12769697060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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