Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_N04
         (1033 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    32   0.77 
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    25   3.3  
U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical...    28   9.4  
AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical...    28   9.4  

>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 31.9 bits (69), Expect = 0.77
 Identities = 23/68 (33%), Positives = 23/68 (33%)
 Frame = -3

Query: 917 GGRXGGGXRXXXLVXARGTXRGGGXXXXXXXXXXXXXXXXXXGXXRGEWXGAXXLGGXGL 738
           GGR GG  R        G  RGGG                  G   G   G    GG G 
Sbjct: 37  GGRSGGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGG 96

Query: 737 GGGXGXGR 714
           GGG G GR
Sbjct: 97  GGGGGGGR 104


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 25.0 bits (52), Expect(2) = 3.3
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +1

Query: 718  PXPSPPPXPXPPSXXAPXHSP 780
            P P PPP P P     P   P
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPP 1358



 Score = 23.0 bits (47), Expect(2) = 3.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +1

Query: 898  PPPXRPPPSXYXXPRXXLXKSSPXXPSXPXFS 993
            PPP  PPP+    P        P  P  P FS
Sbjct: 1356 PPPPPPPPTMSKAPTGV---PLPVPPPPPLFS 1384


>U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical
           protein R144.4a protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 718 PXPSPPPXPXPPSXXAPXHS 777
           P P PPP P PP+  AP  S
Sbjct: 6   PPPPPPPPPPPPAASAPPPS 25


>U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical
           protein R144.4b protein.
          Length = 362

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 718 PXPSPPPXPXPPSXXAPXHS 777
           P P PPP P PP+  AP  S
Sbjct: 6   PPPPPPPPPPPPAASAPPPS 25


>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
           protein W03F11.4 protein.
          Length = 1406

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 718 PXPSPPPXPXPPSXXA 765
           P P+PPP P PPS  A
Sbjct: 829 PPPNPPPAPQPPSSAA 844


>AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical
           protein Y51H7C.1 protein.
          Length = 448

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
 Frame = +3

Query: 570 PTPTPRARLPHGSVAATR-----TPPXPXSLLXPP-XCLRTATXAS 689
           P  TP A  P GS++  R     TPP P +   PP    RT   AS
Sbjct: 148 PGSTPPATFPPGSISTVRYTPGPTPPGPWTYTAPPYYTYRTVPPAS 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,324,355
Number of Sequences: 27780
Number of extensions: 183738
Number of successful extensions: 1424
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2730644118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)