Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_N03
(928 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 31 0.17
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.17
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.23
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.40
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.40
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.93
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.6
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.6
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 3.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.0
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 5.0
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 26 8.7
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 170 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 331
PT ET T + T + +TTT+ + T + T T P + T+ LP++
Sbjct: 102 PTVETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155
Score = 29.1 bits (62), Expect = 0.93
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 146 TPLG*WKTPTQETATNLLTTARTSLILPKTTT----LMETATNLSTTVHITWTVPKADLT 313
TP+ TPT ET T L T A T+ + TTT M T T ++TT + T+ +
Sbjct: 249 TPMEAMITPTVET-TTLPTAAMTTPVEETTTTPMVETMITPTVVTTTTPMVETMITPTVV 307
Query: 314 SSLPL-SLVLAV 346
++ P+ LV+AV
Sbjct: 308 TTTPMVILVMAV 319
Score = 27.1 bits (57), Expect = 3.8
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 167 TPTQETATNLLTTARTSLILPK---TTTLMETATNLSTTVHITWTVPKADLTSSLPL 328
TP +ET T + T+ ILP TT ++ET T TV T T P + T+ P+
Sbjct: 68 TPMEETTT-ITPMVETTTILPMAAMTTPMVETTT--IPTVETT-TTPMVETTTITPM 120
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 771 PSSXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXPPXXXPPPXPXXPXP 926
P+S PP P P P P P P PP P P P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +3
Query: 735 PGPXARXGGXXSPSSXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXPPXXXPPPXPX 914
P P +PS PP P P P P PP PP P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAP----PVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Query: 915 XPXP 926
P P
Sbjct: 1161 VPKP 1164
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +3
Query: 735 PGPXARXGGXXSPSSXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXPPXXXPPPXP 911
P P +PS PP P P P P P PP PP P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +3
Query: 735 PGPXARXGGXXSPSSXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXPPXXXPPPXPX 914
P P +PSS PP P P P PP PP P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPP---VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 915 XPXP 926
P P
Sbjct: 1219 VPTP 1222
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/63 (25%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Frame = +3
Query: 741 PXARXGGXXSPSSXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXPPXXXPP-PXPXX 917
P +PS+ PP P P P P P P PP P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 918 PXP 926
P
Sbjct: 1110 AVP 1112
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 6/59 (10%)
Frame = +3
Query: 768 SPSSXPPPPGXXPXXPWXP------XPXPXXXXXPPXXXXXXXXPPXXXPPPXPXXPXP 926
+PS PP P P P P P PP PP P P P P
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 771 PSSXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXPPXXXPPPXPXXPXP 926
P S PP P P P P PP PP PPP P P
Sbjct: 1694 PQSAAPPQMSAPTPP----PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/55 (25%), Positives = 15/55 (27%)
Frame = +1
Query: 757 GGXXPLHXXXPPPGKXPXXXGXPXXFPPXXPXPXXXXXXXVXPPXXXXPPXXSXP 921
GG P H PP + P P P PP PP P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/64 (28%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Frame = +3
Query: 735 PGPXARXGGXXSPSSXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXP--PXXXPPPX 908
P P P+S PP P P P P P P P P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 909 PXXP 920
P P
Sbjct: 188 PSLP 191
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +3
Query: 771 PSSXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXPPXXXPPPXPXXPXP 926
PS PP P P P P P P PP P P P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 771 PSSXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXPPXXXPPPXPXXP 920
PS PP P P P P PP PPP P
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 372 NFLRYSLLPTASTRERGRLEVRSALGTVHVICTVVDRFV 256
NF ++P STR+R + +R G +H+IC D +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.1 bits (62), Expect = 0.93
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 185 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 334
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +1
Query: 232 DYNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 336
DYN N N Y PI N Y+++ G PYF PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 854 PXXPPPXXXXPPRXPXPPXXXPPP 925
P PPP PP P PP PPP
Sbjct: 10 PPPPPPPGFEPPSQPPPP---PPP 30
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 768 SPSSXPPPPGXXPXXPWXPXPXP 836
+P PPPPG P P P P
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +3
Query: 771 PSSXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXPPXXXPPPXPXXPXP 926
PS+ P P P P P P P PP PP P P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 678 PXNPXXXXXXTXXSLXFIXPGPXARXGGXXSPSSXPPPPGXXPXXPWXPXPXP 836
P P T P P GG P PPPPG P P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP---PPPPGVAGAGPPPPPPPP 782
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Frame = +3
Query: 777 SXPPPPGXXPXXPWXPXPXPXXXXXPPXXXXXXXXPPXXXPP------PXPXXPXP 926
S PPPP P P P PP PP PP P P P P
Sbjct: 731 SPPPPP----PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 921 GGXXXGGXGXRGGXXXXGGGXXGXXXXXXEXGXGP 817
GG G G GG GGG G G GP
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -3
Query: 920 GXXXXGGXXXXGGXTXXXXXXXGXGXXGGXXXGXPXXXGXXPGG 789
G GG GG G G G G P G PGG
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 921 GGXXXGGXGXRGGXXXXGGGXXGXXXXXXEXGXGP 817
GG G G GG GGG G G GP
Sbjct: 231 GGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 258 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 365
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 229 KDYNPNGNGYEPIDNGAYYVDRPQGRP 309
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,712,454
Number of Sequences: 5004
Number of extensions: 51730
Number of successful extensions: 231
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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