Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M22
         (954 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   1.1  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   4.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   4.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   6.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   8.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   8.1  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 850 PPXXGPXPXGXPXPPXPP 903
           PP  G  P G P P  PP
Sbjct: 68  PPSGGQPPQGMPYPRFPP 85


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +1

Query: 841 PPXPPXXGPXPXGXPXPPXPPPPXPTXSPP 930
           P  PP         P P  PP P P   PP
Sbjct: 162 PALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = +1

Query: 358 GSTESLRSNFLVSKYITPNISNVIMFSTLLNKSFL*XKQNNKXPXPXXXVPAAADL 525
           G+  S + NFL +  ++ NI  +   S   +KS    KQN K P P    P+  DL
Sbjct: 660 GTIGSNQRNFLKNALMSNNI--LPPESPTRDKS----KQNEKSPSPQQRSPSVTDL 709


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 819 PTXPPXPXPXPPXXRPPP 872
           PT PP P P PP  R  P
Sbjct: 95  PTTPPTPSP-PPEERLTP 111


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 271 FNFFPQFLNCFLRTLSQRIYAIVFFRSIS 185
           F   P+ +    +T  Q+ YA+ FF ++S
Sbjct: 16  FALTPRSIKLEKQTFIQKFYAVAFFLALS 44


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/28 (35%), Positives = 10/28 (35%)
 Frame = +1

Query: 844 PXPPXXGPXPXGXPXPPXPPPPXPTXSP 927
           P P      P   P  P  P P P  SP
Sbjct: 71  PLPSDGTTSPEPDPEIPVAPEPAPLASP 98


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 898 PPPPXPTXSPP 930
           PPPP P   PP
Sbjct: 736 PPPPHPHHQPP 746


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 898 PPPPXPTXSPP 930
           PPPP P   PP
Sbjct: 628 PPPPHPHHQPP 638


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 352 LQIFIKFVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTL 227
           L IF   +E V      FL ++ GQG FN      N  L T+
Sbjct: 247 LVIFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNMSLLTV 288


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 893 PXPXPXXPXPPP 928
           P P P  P PPP
Sbjct: 205 PEPVPSTPYPPP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,438
Number of Sequences: 336
Number of extensions: 4815
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26892580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)