Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_M19
(1347 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 34 0.29
11_06_0188 + 21036465-21036627,21036735-21036883,21037369-210374... 33 0.39
03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171 32 1.2
07_01_0862 - 7172083-7172931 30 3.6
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 3.6
01_02_0031 + 10364487-10365407 30 3.6
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 30 4.8
06_03_0757 + 24267599-24268882 29 6.3
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 29 6.3
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 29 6.3
01_06_0561 + 30251547-30252173,30252248-30252405,30253250-302541... 29 6.3
02_03_0120 + 15463163-15465250 29 8.4
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 29 8.4
01_06_0146 + 26969011-26969995,26970878-26970930 29 8.4
01_01_1067 + 8403584-8404195,8404532-8404693,8404837-8405346,840... 29 8.4
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 33.9 bits (74), Expect = 0.29
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 634 PAPPXXXLLXXPPPXXXPPXLPLSPP 711
P PP L PPP PP LP+ PP
Sbjct: 1181 PPPPPPPLPSGPPPQPAPPPLPIQPP 1206
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 628 PLPAPPXXXLLXXPPPXXXPPXLPLSPP 711
P P PP L PPP PP LP PP
Sbjct: 1169 PPPPPPLSPSLPPPPP---PPPLPSGPP 1193
>11_06_0188 +
21036465-21036627,21036735-21036883,21037369-21037484,
21037939-21038101
Length = 196
Score = 33.5 bits (73), Expect = 0.39
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2
Query: 710 GGEXGRXGGXXXGGGXXRXXXXGGAGRGXR 621
GG G GG GGG R GG GRG R
Sbjct: 9 GGRFGGGGGGRFGGGGGRGGRFGGGGRGGR 38
>03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171
Length = 1054
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +1
Query: 628 PLPAPPXXXLLXXPPPXXXPPXLPLSP 708
PLP PP L PPP PP LPL P
Sbjct: 84 PLPLPPPVLLYLQPPPP--PPLLPLLP 108
>07_01_0862 - 7172083-7172931
Length = 282
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 622 LXPLPAPPXXXLLXXPPPXXXPPXLPLSPP 711
L PLP PP L PPP P PL PP
Sbjct: 158 LFPLPLPPRKKPLLYPPP-LPPKKKPLPPP 186
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 622 LXPLPAPPXXXLLXXPPPXXXPPXLPLSPP 711
L P P PP + P P PP P PP
Sbjct: 95 LLPTPPPPPASISPTPAPPLPPPPAPAPPP 124
>01_02_0031 + 10364487-10365407
Length = 306
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 622 LXPLPAPPXXXLLXXPPPXXXPPXLPLSPP 711
L P P PP L PPP P LPL+PP
Sbjct: 167 LVPPPPPPPPALPAPPPPPA--PMLPLAPP 194
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 634 PAPPXXXLLXXPPPXXXPPXLPLSPP 711
P PP L PPP PP P PP
Sbjct: 574 PEPPSPRHLPSPPPLRSPPRQPTPPP 599
>06_03_0757 + 24267599-24268882
Length = 427
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 710 GGEXGRXGGXXXGGGXXRXXXXGGAGRG 627
GG G GG GGG R GG G G
Sbjct: 299 GGNGGGNGGGSGGGGGTRQAFSGGGGSG 326
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 710 GGEXGRXGGXXXGGGXXRXXXXGGAGRG 627
G GR GG GGG R GGAG G
Sbjct: 11 GRGRGRGGGRGGGGGDGRGGGYGGAGGG 38
>03_05_0704 -
26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 710 GGEXGRXGGXXXGGGXXRXXXXGGAGRGXRXXXAQXD 600
GG GR GG GGG R GG G G R + D
Sbjct: 6 GGGGGRRGGR--GGGGGREGGGGGGGGGGRGGQGRGD 40
>01_06_0561 +
30251547-30252173,30252248-30252405,30253250-30254192,
30254271-30254438,30254546-30254857,30255498-30255557,
30255905-30255937,30256083-30256271
Length = 829
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 710 GGEXGRXGGXXXGGGXXRXXXXGGAGRGXR 621
G E GR GG GGG GG G G R
Sbjct: 18 GEEGGRRGGGGGGGGGGGGTGGGGGGGGRR 47
>02_03_0120 + 15463163-15465250
Length = 695
Score = 29.1 bits (62), Expect = 8.4
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -2
Query: 1322 PXXXNQKXXPPPGGXNPXXPKPKXPPHXXTTH 1227
P N + PPP +P P P PP H
Sbjct: 292 PMPPNNQPLPPPPSPSPSPPPPSPPPPPHPNH 323
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 29.1 bits (62), Expect = 8.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 628 PLPAPPXXXLLXXPPPXXXPPXLPLSPP 711
P APP PPP PP LP++ P
Sbjct: 971 PNVAPPPFTRQDIPPPPPSPPPLPITQP 998
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 628 PLPAPPXXXLLXXPPPXXXPPXLPLSPP 711
P APP P P PP LP SPP
Sbjct: 99 PRAAPPPAPAPDQPAPPSPPPSLPPSPP 126
>01_01_1067 +
8403584-8404195,8404532-8404693,8404837-8405346,
8405434-8405493,8405721-8406137,8406576-8407100
Length = 761
Score = 29.1 bits (62), Expect = 8.4
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 710 GGEXGRXGGXXXGGGXXRXXXXGGAGRG 627
GG G GG GGG R GGA RG
Sbjct: 50 GGGGGGGGGGGGGGGGERVGAVGGAVRG 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,405,765
Number of Sequences: 37544
Number of extensions: 250648
Number of successful extensions: 2411
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2176
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4236833328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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