Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_M17
(951 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 34 0.17
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 34 0.17
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 0.34
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 24 3.9
Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical p... 29 4.9
Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical p... 29 4.9
Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical p... 29 4.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 26 5.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 26 5.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.5
AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical... 28 8.5
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 719 PXPXPXAGXSLXPXPXSXPPPXWGXXXXXXXXXXXXXXXXXXGTYPP*XPPPXKXPFXPX 898
P P P P P PPP +G G YPP PPP P
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPS 364
Query: 899 GXPPXXXP 922
P P
Sbjct: 365 SPPTDGGP 372
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 719 PXPXPXAGXSLXPXPXSXPPPXWGXXXXXXXXXXXXXXXXXXGTYPP*XPPPXKXPFXPX 898
P P P P P PPP +G G YPP PPP P
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPS 364
Query: 899 GXPPXXXP 922
P P
Sbjct: 365 SPPTDGGP 372
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect(2) = 0.34
Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +2
Query: 608 RFPLEAPSCRS-PVSXXXPXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXPXPXSXPPP 781
++P C P P P C+AP P+ P P P P P PPP
Sbjct: 19 QYPFGRGGCGGCPTPMCQPRMP--CAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPP 75
Score = 21.8 bits (44), Expect(2) = 0.34
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 854 PP*XPPPXKXPFXPXGXPPXXXPXXP 931
PP PPP P P PP P P
Sbjct: 72 PPPPPPPMPCPPPP---PPMPRPSCP 94
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/107 (24%), Positives = 31/107 (28%), Gaps = 5/107 (4%)
Frame = +2
Query: 626 PSCRSPVSXXXPXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXP-----XPXSXPPPXWG 790
P +P+ P P P P P P P G + P P PP +G
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326
Query: 791 XXXXXXXXXXXXXXXXXXGTYPP*XPPPXKXPFXPXGXPPXXXPXXP 931
G PP PPP + P G P P P
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPP--PPPPRYPSAGPGMYPPPPPSRP 371
Score = 29.5 bits (63), Expect = 3.7
Identities = 24/95 (25%), Positives = 27/95 (28%), Gaps = 4/95 (4%)
Frame = +2
Query: 659 PXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXPXPXSXPPPXW----GXXXXXXXXXXXX 826
P P P P+ P P P + P P PP G
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 827 XXXXXXGTYPP*XPPPXKXPFXPXGXPPXXXPXXP 931
G PP PPP + P G PP P P
Sbjct: 325 FGPPGMGGMPP--PPPPGMRY-PGGMPPPPPPRYP 356
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.2
Identities = 29/102 (28%), Positives = 30/102 (29%)
Frame = +2
Query: 617 LEAPSCRSPVSXXXPXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXPXPXSXPPPXWGXX 796
L APS + S P P L G P P P G L P PPP
Sbjct: 693 LSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGG 750
Query: 797 XXXXXXXXXXXXXXXXGTYPP*XPPPXKXPFXPXGXPPXXXP 922
G PP PPP P G PP P
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPP---PGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.2
Identities = 29/102 (28%), Positives = 30/102 (29%)
Frame = +2
Query: 617 LEAPSCRSPVSXXXPXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXPXPXSXPPPXWGXX 796
L APS + S P P L G P P P G L P PPP
Sbjct: 693 LSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGG 750
Query: 797 XXXXXXXXXXXXXXXXGTYPP*XPPPXKXPFXPXGXPPXXXP 922
G PP PPP P G PP P
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPP---PGGFKGGPPPPPP 789
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/107 (24%), Positives = 31/107 (28%), Gaps = 5/107 (4%)
Frame = +2
Query: 626 PSCRSPVSXXXPXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXP-----XPXSXPPPXWG 790
P +P+ P P P P P P P G + P P PP +G
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336
Query: 791 XXXXXXXXXXXXXXXXXXGTYPP*XPPPXKXPFXPXGXPPXXXPXXP 931
G PP PPP + P G P P P
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPP--PPPPRYPSAGPGMYPPPPPSRP 381
Score = 29.5 bits (63), Expect = 3.7
Identities = 24/95 (25%), Positives = 27/95 (28%), Gaps = 4/95 (4%)
Frame = +2
Query: 659 PXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXPXPXSXPPPXW----GXXXXXXXXXXXX 826
P P P P+ P P P + P P PP G
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 827 XXXXXXGTYPP*XPPPXKXPFXPXGXPPXXXPXXP 931
G PP PPP + P G PP P P
Sbjct: 335 FGPPGMGGMPP--PPPPGMRY-PGGMPPPPPPRYP 366
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.2
Identities = 29/102 (28%), Positives = 30/102 (29%)
Frame = +2
Query: 617 LEAPSCRSPVSXXXPXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXPXPXSXPPPXWGXX 796
L APS + S P P L G P P P G L P PPP
Sbjct: 276 LSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGG 333
Query: 797 XXXXXXXXXXXXXXXXGTYPP*XPPPXKXPFXPXGXPPXXXP 922
G PP PPP P G PP P
Sbjct: 334 LPPISGGPPPPPPPPGGCPPPPPPPP---PGGFKGGPPPPPP 372
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.9 bits (64), Expect = 2.8
Identities = 29/110 (26%), Positives = 32/110 (29%), Gaps = 4/110 (3%)
Frame = +2
Query: 614 PLEAPSCRSPVSXXXPX-YPDTCSAPXPLLXXEXGXPXPXPXAGXSLXPXPXSXPPPXWG 790
P EAP P P P + P P P P +G P S PP G
Sbjct: 202 PSEAPPSGGPTGPFDPSGAPPSGGPPGPF------NPSGAPPSGGPPGPFDPSGAPPS-G 254
Query: 791 XXXXXXXXXXXXXXXXXXGTYPP*XPPPX---KXPFXPXGXPPXXXPXXP 931
G + P PP PF P G PP P P
Sbjct: 255 GPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP 304
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.7
Identities = 28/92 (30%), Positives = 33/92 (35%)
Frame = +2
Query: 635 RSPVSXXXPXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXPXPXSXPPPXWGXXXXXXXX 814
++P + P P +P PL G P P P AG P S PPP G
Sbjct: 230 QAPPAGSPPPPPPPKGSP-PLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTG--SPPPPP 284
Query: 815 XXXXXXXXXXGTYPP*XPPPXKXPFXPXGXPP 910
G+ PP PPP P P G P
Sbjct: 285 AGGSPPPPRAGSPPP-PPPPRGSP--PTGSLP 313
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.7
Identities = 28/92 (30%), Positives = 33/92 (35%)
Frame = +2
Query: 635 RSPVSXXXPXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXPXPXSXPPPXWGXXXXXXXX 814
++P + P P +P PL G P P P AG P S PPP G
Sbjct: 251 QAPPAGSPPPPPPPKGSP-PLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTG--SPPPPP 305
Query: 815 XXXXXXXXXXGTYPP*XPPPXKXPFXPXGXPP 910
G+ PP PPP P P G P
Sbjct: 306 AGGSPPPPRAGSPPP-PPPPRGSP--PTGSLP 334
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.7
Identities = 28/92 (30%), Positives = 33/92 (35%)
Frame = +2
Query: 635 RSPVSXXXPXYPDTCSAPXPLLXXEXGXPXPXPXAGXSLXPXPXSXPPPXWGXXXXXXXX 814
++P + P P +P PL G P P P AG P S PPP G
Sbjct: 236 QAPPAGSPPPPPPPKGSP-PLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTG--SPPPPP 290
Query: 815 XXXXXXXXXXGTYPP*XPPPXKXPFXPXGXPP 910
G+ PP PPP P P G P
Sbjct: 291 AGGSPPPPRAGSPPP-PPPPRGSP--PTGSLP 319
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 24.2 bits (50), Expect(2) = 3.9
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 719 PXPXPXAGXSLXPXPXSXPPP 781
P P P L P P PPP
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPP 1362
Score = 23.4 bits (48), Expect(2) = 3.9
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 854 PP*XPPPXKXPFXPXGXPPXXXPXXPXXRXSL 949
PP PPP P G P P P S+
Sbjct: 1356 PPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSM 1387
>Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical
protein C36B1.12c protein.
Length = 662
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 516 KRQQRGLXTVPGLLLAFCSHVLSCV-IPLILWITVL 412
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical
protein C36B1.12b protein.
Length = 640
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 516 KRQQRGLXTVPGLLLAFCSHVLSCV-IPLILWITVL 412
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical
protein C36B1.12a protein.
Length = 652
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 516 KRQQRGLXTVPGLLLAFCSHVLSCV-IPLILWITVL 412
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 26.2 bits (55), Expect(2) = 5.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 854 PP*XPPPXKXPFXPXGXPPXXXPXXP 931
PP PPP P G PP P P
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 21.0 bits (42), Expect(2) = 5.4
Identities = 7/21 (33%), Positives = 9/21 (42%)
Frame = +2
Query: 719 PXPXPXAGXSLXPXPXSXPPP 781
P P P + P + PPP
Sbjct: 612 PPPPPPQSFGMAPISSAAPPP 632
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 26.2 bits (55), Expect(2) = 5.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 854 PP*XPPPXKXPFXPXGXPPXXXPXXP 931
PP PPP P G PP P P
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 21.0 bits (42), Expect(2) = 5.5
Identities = 7/21 (33%), Positives = 9/21 (42%)
Frame = +2
Query: 719 PXPXPXAGXSLXPXPXSXPPP 781
P P P + P + PPP
Sbjct: 438 PPPPPPQSFGMAPISSAAPPP 458
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 851 YPP*XPPPXKXPFXPXGXPP 910
YPP PPP P P G PP
Sbjct: 715 YPPAPPPPGVGPPPPQGIPP 734
>AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical
protein Y82E9BL.17 protein.
Length = 324
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 521 WKNASNAAFXRFLAFCWPFAHMF 453
WKN N F + C PF H+F
Sbjct: 212 WKNTKNFCFDNYELECPPFEHLF 234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,674,941
Number of Sequences: 27780
Number of extensions: 314268
Number of successful extensions: 924
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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