Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_M17
(951 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.58
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 5.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 5.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 5.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 5.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 5.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 5.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 5.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 5.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 5.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 5.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 5.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 5.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 5.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 5.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 5.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 5.4
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 9.4
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.8 bits (54), Expect = 0.58
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 462 SHVLSCVIPLILWITVLPPLSELIPLAA 379
S +LS V+ L+L +LPP S ++PL A
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIA 297
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.4 bits (48), Expect = 3.1
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 483 GLLLAFCSHVL-SCVIPLILWITVLPPLSELIPL 385
G ++ CS +L S + +L ++PP S IPL
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPL 311
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 126 TPFPPRFIPPDMYRLRPPP 144
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 126 TPFPPRFIPPDMYRLRPPP 144
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 126 TPFPPRFIPPDMYRLRPPP 144
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 126 TPFPPRFIPPDMYRLRPPP 144
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 126 TPFPPRFIPPDMYRLRPPP 144
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 126 TPFPPRFIPPDMYRLRPPP 144
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 126 TPFPPRFIPPDMYRLRPPP 144
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 375 TPFPPRFIPPDMYRLRPPP 393
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 375 TPFPPRFIPPDMYRLRPPP 393
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 375 TPFPPRFIPPDMYRLRPPP 393
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 375 TPFPPRFIPPDMYRLRPPP 393
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 375 TPFPPRFIPPDMYRLRPPP 393
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 375 TPFPPRFIPPDMYRLRPPP 393
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 374 TPFPPRFIPPDMYRLRPPP 392
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 359 TPFPPRFIPPDMYRLRPPP 377
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 882 TPSLPXXXPPXXYRXXPXP 938
TP P PP YR P P
Sbjct: 375 TPFPPRFIPPDMYRLRPPP 393
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 9.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 462 SHVLSCVIPLILWITVLPPLSELIPL 385
S +LS + +L ++PP S ++PL
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPL 302
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,789
Number of Sequences: 438
Number of extensions: 5238
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31202262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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