Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M16
         (1009 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...   107   6e-22
UniRef50_UPI0000DB7D01 Cluster: PREDICTED: similar to Wiskott-Al...    36   2.2  
UniRef50_Q41645 Cluster: Extensin; n=1; Volvox carteri|Rep: Exte...    36   2.2  
UniRef50_Q9F3G2 Cluster: Putative uncharacterized protein SCO453...    35   3.8  
UniRef50_Q6YU87 Cluster: Proline-rich protein-like; n=3; Oryza s...    34   6.7  
UniRef50_UPI000065F4EB Cluster: SH3-containing GRB2-like protein...    33   8.8  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score =  107 bits (256), Expect = 6e-22
 Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 4/85 (4%)
 Frame = +1

Query: 106 MAAKFVV-LFACIALAQGAMVRRDAP---DFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQ 273
           MAAKFVV L AC+AL+  AMVRRDAP   + F+++E H KEF KT  +QFNSL  SK+ Q
Sbjct: 1   MAAKFVVVLAACVALSHSAMVRRDAPAGGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQ 60

Query: 274 DFSKAWKDGSESVLQQLNAFAKSLQ 348
           DF+KA KDGS+SVLQQL+AF+ SLQ
Sbjct: 61  DFNKALKDGSDSVLQQLSAFSSSLQ 85



 Score = 46.4 bits (105), Expect = 0.001
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +3

Query: 450 NVEKNATAPPREAAGPPLQNTVQESQKLAXKVSSNVXETNEKLAP 584
           +VEK A A  ++     +Q TVQESQKLA +V+SN+ ETN+KLAP
Sbjct: 119 DVEKEANAF-KDKLQAAVQTTVQESQKLAKEVASNMEETNKKLAP 162



 Score = 44.8 bits (101), Expect = 0.004
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = +2

Query: 353 ALGDANGKAKEALEQSRQNIERTA 424
           A+ DANGKAKEALEQ+RQN+E+TA
Sbjct: 87  AISDANGKAKEALEQARQNVEKTA 110


>UniRef50_UPI0000DB7D01 Cluster: PREDICTED: similar to Wiskott-Aldrich
            syndrome (eczema-thrombocytopenia); n=1; Apis
            mellifera|Rep: PREDICTED: similar to Wiskott-Aldrich
            syndrome (eczema-thrombocytopenia) - Apis mellifera
          Length = 528

 Score = 35.5 bits (78), Expect = 2.2
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +1

Query: 832  PXPLNPNPXRSXLSDP-PPXSFXIPXEXKXAPSFSPNLWRXXPT---ALSLXRPXSXXPP 999
            P P    P ++ ++ P PP  F  P     APS +P + R  PT     SL    S  PP
Sbjct: 319  PVPARTVPHQTRIAPPLPPNRFNAPSTPPSAPSSAPPVHRTLPTRPPPPSLTSAPSLPPP 378

Query: 1000 PKP 1008
            P P
Sbjct: 379  PPP 381


>UniRef50_Q41645 Cluster: Extensin; n=1; Volvox carteri|Rep: Extensin
            - Volvox carteri
          Length = 464

 Score = 35.5 bits (78), Expect = 2.2
 Identities = 20/59 (33%), Positives = 22/59 (37%)
 Frame = +1

Query: 832  PXPLNPNPXRSXLSDPPPXSFXIPXEXKXAPSFSPNLWRXXPTALSLXRPXSXXPPPKP 1008
            P P +P P R   S PPP S   P     +P   P      P   S   P    PPP P
Sbjct: 336  PPPPSPPPPRPSPSPPPPRSSPSPPPPVVSPPPPPPRASPPPPPASSPPPPPRPPPPSP 394


>UniRef50_Q9F3G2 Cluster: Putative uncharacterized protein SCO4538;
           n=1; Streptomyces coelicolor|Rep: Putative
           uncharacterized protein SCO4538 - Streptomyces
           coelicolor
          Length = 111

 Score = 34.7 bits (76), Expect = 3.8
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 202 HHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFA 336
           +HTK+  ++ +      + +    DF   W+DG E + QQL+A A
Sbjct: 28  NHTKKLFESYKDDIGDGSVNDALDDFESNWEDGREDITQQLDALA 72


>UniRef50_Q6YU87 Cluster: Proline-rich protein-like; n=3; Oryza
            sativa|Rep: Proline-rich protein-like - Oryza sativa
            subsp. japonica (Rice)
          Length = 263

 Score = 33.9 bits (74), Expect = 6.7
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +1

Query: 841  LNPNPXRSXLSDPPPXSFX---IPXEXKXAPSFSPNLWRXXPTALSLXRPXSXXPPPKP 1008
            L P+P  + +  PPP S     +P   +  P   P +WR  P +L +       PPP P
Sbjct: 74   LAPSPIPTPIIAPPPVSSPAPPLPPLWRRRPRRLPPIWRPTPPSLPVDTMPPPPPPPPP 132


>UniRef50_UPI000065F4EB Cluster: SH3-containing GRB2-like protein
            3-interacting protein 1 (Endophilin- 3-interacting
            protein).; n=1; Takifugu rubripes|Rep: SH3-containing
            GRB2-like protein 3-interacting protein 1 (Endophilin-
            3-interacting protein). - Takifugu rubripes
          Length = 765

 Score = 33.5 bits (73), Expect = 8.8
 Identities = 20/59 (33%), Positives = 24/59 (40%)
 Frame = +1

Query: 832  PXPLNPNPXRSXLSDPPPXSFXIPXEXKXAPSFSPNLWRXXPTALSLXRPXSXXPPPKP 1008
            P PL P   RS +S P P S  I      A +  P+      T  S   P    PPP+P
Sbjct: 362  PPPLPPTTYRSIMSSPGPPSGSILTRTVLAFTADPSSPARATTPQSRGSPVPPPPPPRP 420


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,366,669
Number of Sequences: 1657284
Number of extensions: 11530200
Number of successful extensions: 44282
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43544
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 95530810518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)