Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M15
         (930 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.74 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   6.9  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   9.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   9.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   9.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   9.1  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   9.1  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 25.4 bits (53), Expect = 0.74
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 870  PPXPPPPPXGG 902
            PP PPPPP  G
Sbjct: 1355 PPPPPPPPSSG 1365


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 14/43 (32%), Positives = 15/43 (34%)
 Frame = +1

Query: 793 PGXGSSGPLXXPPXXXXXPPXPPXXXPXXLPPPLXGGXXRXPP 921
           P  G+ GP   P      P       P   PPP  GG    PP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPP--GGPPGAPP 56


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 873 PXPPPPPXGGXXP 911
           P PPPPP     P
Sbjct: 341 PAPPPPPPSSSGP 353


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 250 LFPSIPQLFSSHSQPAYLG 194
           + P  P+L+  H  P +LG
Sbjct: 9   ILPLNPKLYDKHRAPKFLG 27


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 873 PXPPPPPXGG 902
           P PPPPP  G
Sbjct: 374 PLPPPPPIRG 383


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 858  PXXXPPXPPPPP 893
            P    P PPPPP
Sbjct: 1852 PVSGSPEPPPPP 1863


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 382 LDTKKLLLRLSVLPRASDFYKIR 314
           LDTKK   ++S L   +D Y ++
Sbjct: 379 LDTKKWNNKISALRALNDLYNVK 401


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 171 SFDECMHIGEADSQQDNQQLVHFGY 97
           S D  + +   D+Q+DN Q++ + Y
Sbjct: 298 SKDSLVFVDNHDTQRDNPQILTYKY 322


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,997
Number of Sequences: 438
Number of extensions: 4476
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)