Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M14
         (924 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    24   1.9  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   3.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   7.8  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 359 ADANGYQPSGAHLPTTPAPXPNPRLHRPGHRVHQN 463
           A A  Y+P  AH P       +P L+   H  H N
Sbjct: 21  AGAGLYEPHVAHRPGLQGLHHSPHLNHAMHPYHAN 55


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 111 QSEEDVSSHFECVCVNGRC 55
           +SE  + S+FEC+   G+C
Sbjct: 33  KSERLMKSYFECLLGTGKC 51


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 314 PLEPWTAMDASSRPSFTSA 258
           P E W  M A+  P+FTS+
Sbjct: 80  PGEKWKEMRATLSPAFTSS 98


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 16/64 (25%), Positives = 24/64 (37%)
 Frame = +2

Query: 338 PIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARGRPTYLSYMIVD 517
           P+  TY  D    Q +G  L        + R HR      +N     R R  Y+ +  V 
Sbjct: 231 PLLFTYTDDGKNQQRTGTELTKMRPKRQSSRRHR------KNLKDPCRRRQMYVDFGSVG 284

Query: 518 KDDY 529
            +D+
Sbjct: 285 WNDW 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,767
Number of Sequences: 336
Number of extensions: 3172
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25858250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)