Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_M14
(924 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_1022 - 21778315-21779007 32 0.74
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 30 2.3
01_06_0590 + 30453407-30455442,30456313-30456586,30456992-30457318 30 3.0
05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563 29 3.9
04_03_0904 + 20717005-20718087 29 3.9
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 5.2
12_02_0434 + 19025539-19026027,19026474-19027553 29 6.9
05_05_0392 + 24629528-24630442 29 6.9
12_02_0587 + 20835741-20836115,20836183-20836218,20836409-208366... 28 9.1
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 28 9.1
07_03_0942 + 22773678-22773777,22773869-22774022,22774194-227742... 28 9.1
06_01_0370 - 2660569-2661591,2661685-2662260 28 9.1
>04_03_1022 - 21778315-21779007
Length = 230
Score = 31.9 bits (69), Expect = 0.74
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 380 PSGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARGRPT 493
P H P TPAP P P + P H H + P P+
Sbjct: 66 PPNYHPPHTPAPAPAPGPYIPPHHPHHHHPPTPAPAPS 103
>03_02_0400 -
8135283-8135490,8136047-8136213,8136289-8136477,
8136560-8136655,8136746-8136874,8136947-8137123,
8137256-8137366,8138592-8138792,8139022-8139186,
8139293-8139527,8139618-8139745,8139833-8139928,
8140017-8140112,8140252-8140325,8140393-8140462,
8140556-8140665,8140753-8140906,8141040-8141155,
8141259-8141379,8141464-8141641,8142331-8142489,
8142619-8142732,8142821-8143000,8143098-8143177
Length = 1117
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 356 IADANGYQPSGAHLPTTPAPXPNPRL 433
I G+ P GAH P PAP P P L
Sbjct: 224 IPKPGGFPPLGAHAPFQPAPTPVPPL 249
>01_06_0590 + 30453407-30455442,30456313-30456586,30456992-30457318
Length = 878
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = -1
Query: 240 DSVAGLILVLVFVRENVSILRHNLGISFASAHDVRNVSDGYRDQSEEDVSSHFECVC 70
D+ A + + + EN LRH + S+HDV S Y E HF C
Sbjct: 516 DTTAEAMNESIALSENEKQLRHEKHYRYVSSHDVAYWSKSYIHDLERSCRDHFRRRC 572
>05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563
Length = 571
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = +2
Query: 308 QAATLPLXGTPIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRPGHRVHQNSPT 472
+ A P G P+Q QP A P P P P+ H P NS T
Sbjct: 496 RGAPRPRYGQPMQYHQSLTQANRQPGYAPRPQINRPAPQPQKHAPSGNTAPNSVT 550
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.5 bits (63), Expect = 3.9
Identities = 27/99 (27%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Frame = +2
Query: 203 TNTSTNIRPATESVARNKERS*TRAVRMHPSPSKVQAATLPLXGTPIQITYIADANGYQP 382
T T T ++PA + KE P P K P TP + T Y P
Sbjct: 32 TPTPTPVKPAPKPEKPPKEHKPPH--HHEPKPEKPPKEHKPPAYTPPKPTPTPPT--YTP 87
Query: 383 SGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARGR-PTY 496
+ P P P P H P + +PT + PTY
Sbjct: 88 TPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPTPPTY 126
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +2
Query: 311 AATLPLXGTPIQITYIADANGYQPSGAHLPTT--PAPXPN--PRLHRPGHRVHQNSP 469
A + L + + ADA GY PT PAP P P+ H+P H H+ P
Sbjct: 6 ALLMALVAISVVLEARADAGGYGGGYTPTPTPVKPAPKPEKPPKEHKPPHH-HEPKP 61
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Frame = +2
Query: 287 HPSPSKVQAATLPLXG------TPIQITYIADANGYQP-SGAHLPTTPAPXPNPRLHRPG 445
H S + +AT P+ +P ++Y + Y P S + PT+ A P + P
Sbjct: 1641 HSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPT 1700
Query: 446 HRVHQNSPTQARGRPTYLSY 505
+ SPT PT SY
Sbjct: 1701 SPSYSYSPTSPSYSPTSPSY 1720
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 335 TPIQITYIADANGYQP-SGAHLPTTPAPXPNPRLHRPGHRVHQNSPT-QARGRPTY 496
+P Y + GY P S ++ P++P+ P+ + P H +SP + PTY
Sbjct: 1781 SPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTY 1836
>12_02_0434 + 19025539-19026027,19026474-19027553
Length = 522
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 435 IARAIEYIRTHPPKPEVGQRI 497
++RAIEY+ THP +P + + I
Sbjct: 334 VSRAIEYLHTHPTRPVIHRDI 354
>05_05_0392 + 24629528-24630442
Length = 304
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 377 QPSGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARGRP 490
+P G +P+P P PR PG R + SP+ A RP
Sbjct: 165 RPGGGR--ASPSPPPPPR-REPGERPTRRSPSPATKRP 199
>12_02_0587 +
20835741-20836115,20836183-20836218,20836409-20836617,
20837402-20837498,20837977-20838046,20838224-20838281,
20838914-20839734,20839780-20840121,20840224-20841227
Length = 1003
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 190 DVFPDKYQYQYQTSNGISGQEQGALVNEGREDASIA-VQGSSGYTAPXWYSH 342
DV P+ + ++ L+N G++ ++ VQG+ GY AP W S+
Sbjct: 842 DVKPENILLDEELEPRLADFGLAKLLNRGKDVQMLSRVQGTRGYIAPEWASN 893
>07_03_1546 + 27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 28.3 bits (60), Expect = 9.1
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 293 SPSKVQAATLPLXGTPIQITYIADANGYQPSGAHLPTTPAPXPNPR-LHRPG-HRVHQNS 466
+P V +AT+P TP Q+ AN P+ +P+ NP + RPG V +S
Sbjct: 921 APPAVSSATVP-GTTPSQMFPGPVANN--PTSRFMPSN-----NPGFVQRPGLSPVQPSS 972
Query: 467 PTQARGRP 490
PTQA+G+P
Sbjct: 973 PTQAQGQP 980
>07_03_0942 +
22773678-22773777,22773869-22774022,22774194-22774265,
22774353-22774424,22774599-22774667,22774754-22774926,
22775457-22775629,22775654-22775827,22775987-22776113,
22776184-22776252,22776432-22776621,22776789-22776921,
22777091-22777441
Length = 618
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 271 EGREDASIAVQGSSGYTAPXWYS 339
EG +AS+ V+G++GY P +YS
Sbjct: 439 EGDSNASMEVRGTAGYLDPEYYS 461
>06_01_0370 - 2660569-2661591,2661685-2662260
Length = 532
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 256 GALVNEGREDASIAVQGSSGYTAPXWYS 339
GA V G E S V G++GY P +YS
Sbjct: 394 GAAVINGMERPSTVVHGTAGYIDPEFYS 421
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,698,101
Number of Sequences: 37544
Number of extensions: 404739
Number of successful extensions: 1484
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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