Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_M14
(924 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_48061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35) 31 1.7
SB_871| Best HMM Match : 7tm_1 (HMM E-Value=0.0017) 30 2.3
SB_2814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059) 29 7.0
SB_54576| Best HMM Match : Nucleoplasmin (HMM E-Value=2.6) 29 7.0
SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 29 7.0
SB_48988| Best HMM Match : DUF1127 (HMM E-Value=1.5) 28 9.3
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_39979| Best HMM Match : RVT_1 (HMM E-Value=4.6e-12) 28 9.3
SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_27389| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_936| Best HMM Match : DUF1127 (HMM E-Value=3.2) 28 9.3
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 31.5 bits (68), Expect = 1.00
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +2
Query: 203 TNTSTNIRPATESVARNKERS*TRAVRMHPS--PSKVQAATLPLXGTPIQITYIADANGY 376
T ++T I+P+ + S T ++ PS P K +T P+ +P +
Sbjct: 1291 TTSTTPIKPSPSTTPIKPSPS-TTPIKPSPSTTPIKPSPSTTPIKPSPSTTS----TTPI 1345
Query: 377 QPSGAHLPTTPAPXPNPRLHRPGHRV-HQ 460
+PS + P P+P P +H G RV HQ
Sbjct: 1346 KPSPSTTPIKPSPSTTPGVHDRGDRVQHQ 1374
>SB_48061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 290 PSPSKVQAATLPLXGTPIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRPGHRVHQNS 466
P P+ + + P P ++ + AN P HL P P +P L G+ +HQ S
Sbjct: 150 PPPTYLHPSQYPPSPPPWELPRVPSANATLPP--HLQYGPPPPTSPGLCNQGYNLHQRS 206
>SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35)
Length = 850
Score = 30.7 bits (66), Expect = 1.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 587 YCETRHINDRQCYGLRCFNNS 525
+C+ +N R CYG+RC+N +
Sbjct: 438 HCDLAMMNGRTCYGVRCYNKT 458
>SB_871| Best HMM Match : 7tm_1 (HMM E-Value=0.0017)
Length = 1675
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 281 RMHPSPSKVQAA--TLPLXGTPIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRPGHRV 454
+ H SP Q T+P G I +T A P +H +PA + RP H +
Sbjct: 1533 KSHNSPLAAQVTQFTIPRSGHRIPVTLSGHAMPDIPLKSHNSPSPAQVTQCPIFRPSHTI 1592
Query: 455 HQNSPTQAR 481
H + P ++R
Sbjct: 1593 H-HPPLRSR 1600
>SB_2814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 29.1 bits (62), Expect = 5.3
Identities = 23/86 (26%), Positives = 34/86 (39%)
Frame = +2
Query: 269 TRAVRMHPSPSKVQAATLPLXGTPIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRPGH 448
T +R+ P S Q T L P Q + G Q A++ T P+ ++
Sbjct: 403 TPDLRVDPQKSDAQEVTRDLRVVPAQSVPLLSTRGPQVIPANIRTAPSNAA----YQASS 458
Query: 449 RVHQNSPTQARGRPTYLSYMIVDKDD 526
++ AR +PT S VD DD
Sbjct: 459 AQERHEARSARDQPTKPSNSDVDNDD 484
>SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059)
Length = 765
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +2
Query: 335 TPIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARG 484
TPI Y + GY P + P + A NP H ++ N P RG
Sbjct: 470 TPISAPYPVE--GYPPPLIYAPMSGACCTNPHCHGQHQAMYANPPPSHRG 517
>SB_54576| Best HMM Match : Nucleoplasmin (HMM E-Value=2.6)
Length = 281
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 395 LPTTPAPXPNPRLHRPGHRVHQNSPTQARGRPTYLSYMIVDKDD 526
L P P P P HR GH V + P + + S+ D++D
Sbjct: 89 LTPKPTPTPAPNTHRTGHPVFRRRPWYNGKKRSAASWEEDDEED 132
>SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1455
Score = 28.7 bits (61), Expect = 7.0
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 284 MHPSPSKVQAATLPLXGT-PIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRPGHRVHQ 460
M P + Q +P+ + P + + + YQ + H +TP P PN + P +R
Sbjct: 862 MRTPPPQFQRPPVPMMHSDPAHLMHHGNMMNYQMNQRHRYSTPQPHPNQYRNFPNNRNQY 921
Query: 461 NSPTQARGRPTYL 499
+ Q R R YL
Sbjct: 922 DRNFQDR-RGHYL 933
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 365 ANGYQPSGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARGRPTY 496
A+ Y P G + PT+ P P P P P QA +P Y
Sbjct: 144 ASVYPPPGGYPPTSYPPQPYPAQPYPQQGYPPQPPPQAYPQPGY 187
>SB_48988| Best HMM Match : DUF1127 (HMM E-Value=1.5)
Length = 270
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 383 SGAHLPTTPAPXPNPRLHRPGHRVHQNSPT 472
S +H P P PN R +PG VH N+PT
Sbjct: 126 STSHRLPAPRPNPNQRPAKPG--VHVNTPT 153
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 279 TALVYERSLFLATDSVAGLILVLVFVRENVSILRHNL 169
T L+ R+L + ++ L L+ +R N+ ILRHNL
Sbjct: 583 TLLILRRNLLILRHNLLILRHNLIILRRNLLILRHNL 619
>SB_39979| Best HMM Match : RVT_1 (HMM E-Value=4.6e-12)
Length = 792
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 383 SGAHLPTTPAPXPNPRLHRPGHRVHQNSPT 472
S +H P P PN R +PG VH N+PT
Sbjct: 58 STSHRLPAPRPNPNQRPAKPG--VHVNTPT 85
>SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 383 SGAHLPTTPAPXPNPRLHRPGHRVHQNSPT 472
S +H P P PN R +PG VH N+PT
Sbjct: 136 STSHRLPAPRPKPNQRPAKPG--VHVNTPT 163
>SB_27389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 383 SGAHLPTTPAPXPNPRLHRPGHRVHQNSPT 472
S +H P P PN R +PG VH N+PT
Sbjct: 136 STSHRLPAPRPNPNQRPAKPG--VHVNTPT 163
>SB_936| Best HMM Match : DUF1127 (HMM E-Value=3.2)
Length = 280
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 383 SGAHLPTTPAPXPNPRLHRPGHRVHQNSPT 472
S +H P P PN R +PG VH N+PT
Sbjct: 136 STSHRLPAPRPNPNQRPAKPG--VHVNTPT 163
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,318,162
Number of Sequences: 59808
Number of extensions: 418264
Number of successful extensions: 1326
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2681370225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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