Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M14
         (924 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    42   8e-06
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.73 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      24   2.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   9.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   9.0  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +2

Query: 332 GTPIQITYIADANGYQPSGAHLPTTPAPXPNPRLHR 439
           G  + ITY+AD NG+Q  G+H+PT P P P P + R
Sbjct: 82  GQQVSITYVADENGFQVQGSHIPTAP-PIP-PEIQR 115



 Score = 41.5 bits (93), Expect = 1e-05
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +1

Query: 157 EADAQIVSQDADV-FPDKYQYQYQTSNGISGQEQGALVNEGREDASIAVQGSSGYTAP 327
           + DA I SQ  +V F   Y   ++TSNGIS QE G    +   +  +  QGS  YTAP
Sbjct: 24  DKDAVITSQQLEVNFDGNYINNFETSNGISHQESGQ-PKQVDNETPVVSQGSDSYTAP 80


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 269 TRAVRMHPSPSKVQAATLPLXGTPIQI--TYIADANGYQPSGAHLPTTPAPXPNP 427
           T +    P P+   AATL L G P  +    +  A+  QP       +P+P P P
Sbjct: 835 TSSTSTSPRPASSTAATLVLSGCPSNMMELQVDIADSQQPLNLS-KKSPSPSPRP 888


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302 KVQAATLP--LXGTPIQITYIADANGYQ--PSGAHLPTTPAPXPNPRLHRPGHRVHQNSP 469
           K+   T P  L    IQ  Y+ D N     P  A    + +P    R     H +  +SP
Sbjct: 2   KIMQTTQPVSLQTQRIQGLYLLDNNDSSGIPHSAESSASNSPDHYERFSPSTHLMDLSSP 61

Query: 470 TQARGRPTYLSY 505
            + R  P Y S+
Sbjct: 62  PEHRDLPIYQSH 73


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 578  TRHINDRQCYGLRCFNNSRPYQLSYN 501
            +RH    +  GL C N  + Y  S+N
Sbjct: 1454 SRHATSHELKGLLCGNTYQLYLTSHN 1479


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 578  TRHINDRQCYGLRCFNNSRPYQLSYN 501
            +RH    +  GL C N  + Y  S+N
Sbjct: 1450 SRHATSHELKGLLCGNTYQLYLTSHN 1475


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,740
Number of Sequences: 438
Number of extensions: 4021
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)