Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_M13
         (860 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19131| Best HMM Match : No HMM Matches (HMM E-Value=.)             175   5e-44
SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44)    30   2.1  
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.4  

>SB_19131| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 456

 Score =  175 bits (425), Expect = 5e-44
 Identities = 79/128 (61%), Positives = 96/128 (75%)
 Frame = +3

Query: 120 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXX 299
           L+E++VIGR +P++    PPLYKMRIF+PD +VA+S+FWYF+ QLK+ KK+ G       
Sbjct: 207 LKEFQVIGRLMPNKKLTVPPLYKMRIFAPDDVVARSKFWYFISQLKRMKKSQGEIVSCQQ 266

Query: 300 XXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 479
                     NFGIWLRY+SRSG HNMYREYRDL+V GAVT CYRDM ARHRAR +SIQI
Sbjct: 267 IYEKKPLQIKNFGIWLRYDSRSGTHNMYREYRDLTVSGAVTACYRDMAARHRARGYSIQI 326

Query: 480 IKVEVIKA 503
           +KVEVI A
Sbjct: 327 MKVEVIPA 334


>SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44)
          Length = 2581

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
 Frame = +3

Query: 15   PIHXREFLKIFDVSVPVSADQVFQIKTPKMKAKGQLREYEVIGRKLPSENEPKPPLYKMR 194
            P+  RE+   F    P+S    F +       K  LR Y++I ++LP+E+E K   +  +
Sbjct: 1395 PVAFREYESPF---YPLSGSSSFSLSVIPTDKK--LRLYQIISQRLPTEDENKYD-FVTK 1448

Query: 195  IFSPD-----PIVAKSRFWYFLRQLKKFKKTTG 278
            I +P+       VA +  W  L + K F  +TG
Sbjct: 1449 ISTPNATWEREFVANASLW-LLDEEKSFSISTG 1480


>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 897

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 129 YEVIGRKLP-SENEPKPPLYKMRI 197
           YEV+G+ +  S N+PK PL K+R+
Sbjct: 285 YEVLGKSVNNSRNQPKDPLKKLRV 308


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,153,896
Number of Sequences: 59808
Number of extensions: 358633
Number of successful extensions: 957
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)