Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_M13
(860 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 190 4e-48
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 190 4e-48
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 190 4e-48
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 190 4e-48
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 190 4e-48
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 190 4e-48
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 185 2e-46
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 110 6e-24
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 47 1e-04
AJ003029-1|CAB92969.1| 539|Homo sapiens syntrophin 5 protein. 31 5.4
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 190 bits (464), Expect = 4e-48
Identities = 91/144 (63%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
Frame = +3
Query: 102 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGX 281
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 282 XXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 461
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 462 AHSIQIIKVEVIKAC-CVSPSTGQ 530
AHSIQI+KVE I A C P+ Q
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQ 144
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 511 CRRPQVKQFHNSTIRFPLXKRV---XHYXRLNTXXPS 612
CRRP VKQFH+S I+FPL RV H R T P+
Sbjct: 137 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 173
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 190 bits (464), Expect = 4e-48
Identities = 91/144 (63%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
Frame = +3
Query: 102 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGX 281
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 282 XXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 461
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 462 AHSIQIIKVEVIKAC-CVSPSTGQ 530
AHSIQI+KVE I A C P+ Q
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQ 144
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 511 CRRPQVKQFHNSTIRFPLXKRV---XHYXRLNTXXPS 612
CRRP VKQFH+S I+FPL RV H R T P+
Sbjct: 137 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 173
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 190 bits (464), Expect = 4e-48
Identities = 91/144 (63%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
Frame = +3
Query: 102 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGX 281
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 282 XXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 461
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 462 AHSIQIIKVEVIKAC-CVSPSTGQ 530
AHSIQI+KVE I A C P+ Q
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQ 144
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 511 CRRPQVKQFHNSTIRFPLXKRV---XHYXRLNTXXPS 612
CRRP VKQFH+S I+FPL RV H R T P+
Sbjct: 137 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 173
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 190 bits (464), Expect = 4e-48
Identities = 91/144 (63%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
Frame = +3
Query: 102 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGX 281
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 282 XXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 461
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 462 AHSIQIIKVEVIKAC-CVSPSTGQ 530
AHSIQI+KVE I A C P+ Q
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQ 144
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 511 CRRPQVKQFHNSTIRFPLXKRV---XHYXRLNTXXPS 612
CRRP VKQFH+S I+FPL RV H R T P+
Sbjct: 137 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 173
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 190 bits (464), Expect = 4e-48
Identities = 91/144 (63%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
Frame = +3
Query: 102 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGX 281
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 282 XXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 461
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRAR 120
Query: 462 AHSIQIIKVEVIKAC-CVSPSTGQ 530
AHSIQI+KVE I A C P+ Q
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQ 144
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 511 CRRPQVKQFHNSTIRFPLXKRV---XHYXRLNTXXPS 612
CRRP VKQFH+S I+FPL RV H R T P+
Sbjct: 137 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 173
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 190 bits (464), Expect = 4e-48
Identities = 91/144 (63%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
Frame = +3
Query: 102 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGX 281
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 282 XXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 461
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 462 AHSIQIIKVEVIKAC-CVSPSTGQ 530
AHSIQI+KVE I A C P+ Q
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQ 144
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 511 CRRPQVKQFHNSTIRFPLXKRV---XHYXRLNTXXPS 612
CRRP VKQFH+S I+FPL RV H R T P+
Sbjct: 137 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 173
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 185 bits (450), Expect = 2e-46
Identities = 86/134 (64%), Positives = 100/134 (74%)
Frame = +3
Query: 102 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGX 281
MKA G LREY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 282 XXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 461
NFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 TVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 462 AHSIQIIKVEVIKA 503
AHSIQI+ VE I A
Sbjct: 121 AHSIQIMMVEEIAA 134
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 110 bits (265), Expect = 6e-24
Identities = 51/68 (75%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAC- 506
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 507 CVSPSTGQ 530
C P+ Q
Sbjct: 101 CRRPAVKQ 108
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 511 CRRPQVKQFHNSTIRFPLXKRV---XHYXRLNTXXPS 612
CRRP VKQFH+S I+FPL RV H R T P+
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 137
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 46.8 bits (106), Expect = 1e-04
Identities = 24/34 (70%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Frame = +3
Query: 432 RDMGARHRARAHSIQIIKVEVIKAC-CVSPSTGQ 530
RDMGARHRARAHSIQI+KVE I A C P+ Q
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQ 34
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 511 CRRPQVKQFHNSTIRFPLXKRV---XHYXRLNTXXPS 612
CRRP VKQFH+S I+FPL RV H R T P+
Sbjct: 27 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 63
>AJ003029-1|CAB92969.1| 539|Homo sapiens syntrophin 5 protein.
Length = 539
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 470 NTDHQSGSNQGLLRVAVH-RSNSSTTAPSDSHXP 568
++DH SG++ L +H NSSTTAPS P
Sbjct: 172 SSDHSSGASSPLFDSGLHLNGNSSTTAPSSPSSP 205
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,333,637
Number of Sequences: 237096
Number of extensions: 1696365
Number of successful extensions: 3523
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3502
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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